RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 CXCL12P48061 93 aa17.3■□□□□ 0.36
LMNA-222ENST00000508500 CCR3P51677 355 aa17.3■□□□□ 0.36
LMNA-222ENST00000508500 KRT85P78386 507 aa17.3■□□□□ 0.36
LMNA-222ENST00000508500 FAM160A1Q05DH4 1040 aa17.3■□□□□ 0.36
LMNA-222ENST00000508500 PUM1Q14671 1186 aaKnown RBP eCLIP17.3■□□□□ 0.36
LMNA-222ENST00000508500 DGKKQ5KSL6 1271 aa17.3■□□□□ 0.36
LMNA-222ENST00000508500 FSTL4Q6MZW2 842 aa17.3■□□□□ 0.36
LMNA-222ENST00000508500 ARL14EPQ8N8R7 260 aaPredicted RBP17.3■□□□□ 0.36
LMNA-222ENST00000508500 TTLL2Q9BWV7 592 aa17.3■□□□□ 0.36
LMNA-222ENST00000508500 B3GNT5Q9BYG0 378 aa17.3■□□□□ 0.36
LMNA-222ENST00000508500 ZNF518BQ9C0D4 1074 aa17.3■□□□□ 0.36
LMNA-222ENST00000508500 SNX25Q9H3E2 840 aa17.3■□□□□ 0.36
LMNA-222ENST00000508500 SMYD3Q9H7B4 428 aa17.3■□□□□ 0.36
LMNA-222ENST00000508500 NXF1Q9UBU9 619 aaKnown RBP17.3■□□□□ 0.36
LMNA-222ENST00000508500 USP25Q9UHP3 1055 aa17.3■□□□□ 0.36
LMNA-222ENST00000508500 F8VP50 259 aa17.29■□□□□ 0.36
LMNA-222ENST00000508500 ATICP31939 592 aa17.29■□□□□ 0.36
LMNA-222ENST00000508500 RAP1GAPP47736 663 aa17.29■□□□□ 0.36
LMNA-222ENST00000508500 TNNC1P63316 161 aa17.29■□□□□ 0.36
LMNA-222ENST00000508500 DPYDQ12882 1025 aa17.29■□□□□ 0.36
LMNA-222ENST00000508500 USP4Q13107 963 aa17.29■□□□□ 0.36
LMNA-222ENST00000508500 TRPC3Q13507 836 aa17.29■□□□□ 0.36
LMNA-222ENST00000508500 LRRC32Q14392 662 aa17.29■□□□□ 0.36
LMNA-222ENST00000508500 MTF1Q14872 753 aa17.29■□□□□ 0.36
LMNA-222ENST00000508500 MAPRE1Q15691 268 aaKnown RBP17.29■□□□□ 0.36
LMNA-222ENST00000508500 TMEM196Q5HYL7 178 aa17.29■□□□□ 0.36
LMNA-222ENST00000508500 DENND5BQ6ZUT9 1274 aa17.29■□□□□ 0.36
LMNA-222ENST00000508500 PAQR9Q6ZVX9 377 aa17.29■□□□□ 0.36
LMNA-222ENST00000508500 DGLUCYQ7Z3D6 616 aa17.29■□□□□ 0.36
LMNA-222ENST00000508500 GOLGA5Q8TBA6 731 aa17.29■□□□□ 0.36
LMNA-222ENST00000508500 FAM126AQ9BYI3 521 aaPredicted RBP17.29■□□□□ 0.36
LMNA-222ENST00000508500 KMT2BQ9UMN6 2715 aaPredicted RBP17.28■□□□□ 0.36
LMNA-222ENST00000508500 TRAV19A0A0A6YYK7 116 aa17.28■□□□□ 0.36
LMNA-222ENST00000508500 A8MXQ7 604 aa17.28■□□□□ 0.36
LMNA-222ENST00000508500 TRDMT1O14717 391 aaKnown RBP17.28■□□□□ 0.36
LMNA-222ENST00000508500 PAPSS2O95340 614 aaPredicted RBP17.28■□□□□ 0.36
LMNA-222ENST00000508500 NR3C1P04150 777 aa17.28■□□□□ 0.36
LMNA-222ENST00000508500 MYL1P05976 194 aa17.28■□□□□ 0.36
LMNA-222ENST00000508500 USP17L7P0C7H9 530 aa17.28■□□□□ 0.36
LMNA-222ENST00000508500 SYKP43405 635 aa17.28■□□□□ 0.36
LMNA-222ENST00000508500 KRBA2Q6ZNG9 492 aa17.28■□□□□ 0.36
LMNA-222ENST00000508500 EZH1Q92800 747 aaPredicted RBP17.28■□□□□ 0.36
LMNA-222ENST00000508500 SYAP1Q96A49 352 aaPredicted RBP17.28■□□□□ 0.36
LMNA-222ENST00000508500 C8orf48Q96LL4 319 aa17.28■□□□□ 0.36
LMNA-222ENST00000508500 CEP295NLQ96MC4 621 aa17.28■□□□□ 0.36
LMNA-222ENST00000508500 RNF38Q9H0F5 515 aa17.28■□□□□ 0.36
LMNA-222ENST00000508500 LINC00597Q9H2U6 94 aa17.28■□□□□ 0.36
LMNA-222ENST00000508500 GDPD2Q9HCC8 539 aa17.28■□□□□ 0.36
LMNA-222ENST00000508500 SMG5Q9UPR3 1016 aaKnown RBP17.28■□□□□ 0.36
LMNA-222ENST00000508500 TRAF3IP3Q9Y228 551 aa17.28■□□□□ 0.36
LMNA-222ENST00000508500 WNT6Q9Y6F9 365 aa17.28■□□□□ 0.36
LMNA-222ENST00000508500 CHURC1-FNTBB4DL54 471 aa17.27■□□□□ 0.36
LMNA-222ENST00000508500 PHACTR2O75167 634 aa17.27■□□□□ 0.36
LMNA-222ENST00000508500 RHOBTB3O94955 611 aa17.27■□□□□ 0.36
LMNA-222ENST00000508500 CKMP06732 381 aa17.27■□□□□ 0.36
LMNA-222ENST00000508500 TCF3P15923 654 aa17.27■□□□□ 0.36
LMNA-222ENST00000508500 HDCP19113 662 aa17.27■□□□□ 0.36
LMNA-222ENST00000508500 GJA4P35212 333 aa17.27■□□□□ 0.36
LMNA-222ENST00000508500 FNTBP49356 437 aa17.27■□□□□ 0.36
LMNA-222ENST00000508500 GALK1P51570 392 aa17.27■□□□□ 0.36
LMNA-222ENST00000508500 NOP14P78316 857 aaKnown RBP17.27■□□□□ 0.36
LMNA-222ENST00000508500 SRSF5Q13243 272 aaKnown RBP17.27■□□□□ 0.36
LMNA-222ENST00000508500 BIRC3Q13489 604 aa17.27■□□□□ 0.36
LMNA-222ENST00000508500 NCOA4Q13772 614 aa17.27■□□□□ 0.36
LMNA-222ENST00000508500 ZNF699Q32M78 642 aa17.27■□□□□ 0.36
LMNA-222ENST00000508500 EML3Q32P44 896 aa17.27■□□□□ 0.36
LMNA-222ENST00000508500 ZACNQ401N2 412 aa17.27■□□□□ 0.36
LMNA-222ENST00000508500 B3GALNT2Q8NCR0 500 aa17.27■□□□□ 0.36
LMNA-222ENST00000508500 SH3RF2Q8TEC5 729 aa17.27■□□□□ 0.36
LMNA-222ENST00000508500 OSCP1Q8WVF1 389 aa17.27■□□□□ 0.36
LMNA-222ENST00000508500 ECT2Q9H8V3 914 aa17.27■□□□□ 0.36
LMNA-222ENST00000508500 A0A1W2PQ27 194 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 A0A1W2PQ64 194 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 A0A1W2PQD8 194 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 ZNF840PA6NDX5 716 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 TRIM66O15016 1216 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 HRO43593 1189 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 OLFM2O95897 454 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 EGFP01133 1207 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 AP3M2P53677 418 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 NRLP54845 237 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 PDGFRLQ15198 375 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 ZNF667Q5HYK9 610 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 SPOPLQ6IQ16 392 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 SCARA5Q6ZMJ2 495 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 SV2AQ7L0J3 742 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 SYNPOQ8N3V7 929 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 FSIP1Q8NA03 581 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 TMC2Q8TDI7 906 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 KCNK16Q96T55 309 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 HINFPQ9BQA5 517 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 POLR3BQ9NW08 1133 aaPredicted RBP17.26■□□□□ 0.35
LMNA-222ENST00000508500 DUS2Q9NX74 493 aaKnown RBP17.26■□□□□ 0.35
LMNA-222ENST00000508500 CIZ1Q9ULV3 898 aaPredicted RBP17.26■□□□□ 0.35
LMNA-222ENST00000508500 ARHGAP26Q9UNA1 814 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 MAPK8IP1Q9UQF2 711 aa17.26■□□□□ 0.35
LMNA-222ENST00000508500 AKAP3O75969 853 aa17.25■□□□□ 0.35
LMNA-222ENST00000508500 ZNF202O95125 648 aa17.25■□□□□ 0.35
LMNA-222ENST00000508500 ANXA13P27216 316 aa17.25■□□□□ 0.35
LMNA-222ENST00000508500 TAF10Q12962 218 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms