RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 MBD2Q9UBB5 411 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 PI4KBQ9UBF8 816 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 KLHL3Q9UH77 587 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 IPPQ9Y573 584 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 TAF6LQ9Y6J9 622 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 IVNS1ABPQ9Y6Y0 642 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 TMEM2Q9UHN6 1383 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 PBRM1Q86U86 1689 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 FLT1P17948 1338 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 NPHP3-ACAD11A0A0J9YXS1 232 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 EVPLLA8MZ36 301 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 USP17L15C9J2P7 530 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 USP17L13C9JLJ4 530 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 USP17L11C9JVI0 530 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 USP17L18D6R9N7 530 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 USP17L22D6RA61 530 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 USP17L17D6RBQ6 530 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 USP17L19D6RCP7 530 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 USP17L20D6RJB6 530 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 H3BNX3 289 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 MTSS1O43312 755 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 TPST1O60507 370 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 NMT2O60551 498 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 ATP6V1G1O75348 118 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 HOXA13P31271 388 aaPredicted RBP7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 TOB1P50616 345 aaPredicted RBP7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 PSMC5P62195 406 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 FOXO4P98177 505 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 USP17L24Q0WX57 530 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 ZNF268Q14587 947 aaPredicted RBP7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 RRP1BQ14684 758 aaKnown RBP7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 RWDD4Q6NW29 188 aaKnown RBP7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 USP17L6PQ6QN14 398 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 LAYNQ6UX15 382 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 NT5DC3Q86UY8 548 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 DHFR2Q86XF0 187 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 ASAP3Q8TDY4 903 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 RNF139Q8WU17 664 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 NAT14Q8WUY8 206 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 VPS33AQ96AX1 596 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 ELMO2Q96JJ3 720 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 QKIQ96PU8 341 aaKnown RBP eCLIP7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 PLEKHG4BQ96PX9 1271 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 DCLK3Q9C098 648 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 SEMA6BQ9H3T3 888 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 RBAKQ9NYW8 714 aaPredicted RBP7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 PNMA3Q9UL41 463 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 RWDD3Q9Y3V2 267 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 SQORQ9Y6N5 450 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 UNC13BO14795 1591 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 MYBP10242 640 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 SERPINH1P50454 418 aaKnown RBP7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 TRAF3Q13114 568 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 KYAT1Q16773 422 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 DUOXA2Q1HG44 320 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 SBK1Q52WX2 424 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 OR6B3Q8NGW1 331 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 ZFAND2BQ8WV99 257 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 OSBPL11Q9BXB4 747 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 C2orf40Q9H1Z8 148 aa7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 IARS2Q9NSE4 1012 aaKnown RBP7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 AGO2Q9UKV8 859 aaKnown RBP7.58□□□□□ -1.2
UBE2D3-224ENST00000508474 E5RI56 91 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 ZSCAN9O15535 394 aaPredicted RBP7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 CYP2D6P10635 497 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 CPA3P15088 417 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 ZNF12P17014 697 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 SLC1A6P48664 564 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 ACVR2BQ13705 512 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 NEDD8Q15843 81 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 FAM83EQ2M2I3 478 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 TFDP3Q5H9I0 405 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 TCHHL1Q5QJ38 904 aaPredicted RBP7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 RNF220Q5VTB9 566 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 FAM71DQ8N9W8 422 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 TDRD5Q8NAT2 981 aaKnown RBP7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 TRIM62Q9BVG3 475 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 NRXN1Q9ULB1 1477 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 DDX3XO00571 662 aaKnown RBP eCLIP7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 RAD51BO15315 384 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 ATMINO43313 823 aaPredicted RBP7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 KATNA1O75449 491 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 RHOBTB1O94844 696 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 FKBP9O95302 570 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 PGM3O95394 542 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 IMPDH2P12268 514 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 TSHRP16473 764 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 PRKAA1Q13131 559 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 TSTA3Q13630 321 aaPredicted RBP7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 PDK1Q15118 436 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 MAPK6Q16659 721 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 SAMD4BQ5PRF9 694 aaKnown RBP7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 FKBP9P1Q75LS8 142 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 KRT73Q86Y46 540 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 SPICE1Q8N0Z3 855 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 ARL10Q8N8L6 244 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 PYDC1Q8WXC3 89 aa7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 REXO4Q9GZR2 422 aaKnown RBP7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 OLA1Q9NTK5 396 aaKnown RBP7.57□□□□□ -1.2
UBE2D3-224ENST00000508474 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms