RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 BRINP2Q9C0B6 783 aa5.4□□□□□ -1.54
TRAPPC13-209ENST00000508304 ARID4BQ4LE39 1312 aaPredicted RBP5.4□□□□□ -1.55
TRAPPC13-209ENST00000508304 TCRBV5S1A1TA0A578 114 aa5.39□□□□□ -1.55
TRAPPC13-209ENST00000508304 CD8B2A6NJW9 211 aa5.39□□□□□ -1.55
TRAPPC13-209ENST00000508304 ABLIM3O94929 683 aa5.39□□□□□ -1.55
TRAPPC13-209ENST00000508304 HOXD9P28356 352 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC13-209ENST00000508304 LILRA4P59901 499 aa5.39□□□□□ -1.55
TRAPPC13-209ENST00000508304 NOGQ13253 232 aa5.39□□□□□ -1.55
TRAPPC13-209ENST00000508304 RGS7BPQ6MZT1 257 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC13-209ENST00000508304 C9orf47Q6ZRZ4 202 aa5.39□□□□□ -1.55
TRAPPC13-209ENST00000508304 PIP4P1Q86T03 277 aa5.39□□□□□ -1.55
TRAPPC13-209ENST00000508304 CPA6Q8N4T0 437 aa5.39□□□□□ -1.55
TRAPPC13-209ENST00000508304 SOCS4Q8WXH5 440 aa5.39□□□□□ -1.55
TRAPPC13-209ENST00000508304 LYZL4Q96KX0 146 aa5.39□□□□□ -1.55
TRAPPC13-209ENST00000508304 ABCF2Q9UG63 623 aa5.39□□□□□ -1.55
TRAPPC13-209ENST00000508304 CCNL1Q9UK58 526 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC13-209ENST00000508304 TNKSO95271 1327 aa5.39□□□□□ -1.55
TRAPPC13-209ENST00000508304 DLDP09622 509 aaKnown RBP5.38□□□□□ -1.55
TRAPPC13-209ENST00000508304 HK3P52790 923 aa5.38□□□□□ -1.55
TRAPPC13-209ENST00000508304 SRSF1Q07955 248 aaKnown RBP eCLIP5.38□□□□□ -1.55
TRAPPC13-209ENST00000508304 L1TD1Q5T7N2 865 aaKnown RBP5.38□□□□□ -1.55
TRAPPC13-209ENST00000508304 SERPINA13PQ6UXR4 307 aa5.38□□□□□ -1.55
TRAPPC13-209ENST00000508304 HEATR3Q7Z4Q2 680 aa5.38□□□□□ -1.55
TRAPPC13-209ENST00000508304 ACRBPQ8NEB7 543 aa5.38□□□□□ -1.55
TRAPPC13-209ENST00000508304 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC13-209ENST00000508304 ZNF398Q8TD17 642 aa5.38□□□□□ -1.55
TRAPPC13-209ENST00000508304 CUL5Q93034 780 aa5.38□□□□□ -1.55
TRAPPC13-209ENST00000508304 EFHD1Q9BUP0 239 aa5.38□□□□□ -1.55
TRAPPC13-209ENST00000508304 CIPCQ9C0C6 399 aa5.38□□□□□ -1.55
TRAPPC13-209ENST00000508304 FEZ2Q9UHY8 353 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC13-209ENST00000508304 NDRG4Q9ULP0 352 aaKnown RBP5.38□□□□□ -1.55
TRAPPC13-209ENST00000508304 FAM90A8PA6NJQ4 464 aa5.37□□□□□ -1.55
TRAPPC13-209ENST00000508304 SLC16A6O15403 523 aa5.37□□□□□ -1.55
TRAPPC13-209ENST00000508304 AHSGP02765 367 aa5.37□□□□□ -1.55
TRAPPC13-209ENST00000508304 A1BGP04217 495 aa5.37□□□□□ -1.55
TRAPPC13-209ENST00000508304 FAM90A13PP0C7W8 464 aa5.37□□□□□ -1.55
TRAPPC13-209ENST00000508304 FAM90A24PP0C7X0 464 aa5.37□□□□□ -1.55
TRAPPC13-209ENST00000508304 VCAM1P19320 739 aa5.37□□□□□ -1.55
TRAPPC13-209ENST00000508304 GHRHRQ02643 423 aa5.37□□□□□ -1.55
TRAPPC13-209ENST00000508304 E2F2Q14209 437 aa5.37□□□□□ -1.55
TRAPPC13-209ENST00000508304 ERV3-1Q14264 604 aa5.37□□□□□ -1.55
TRAPPC13-209ENST00000508304 IQCB1Q15051 598 aa5.37□□□□□ -1.55
TRAPPC13-209ENST00000508304 RNASE12Q5GAN4 147 aaKnown RBP5.37□□□□□ -1.55
TRAPPC13-209ENST00000508304 ZBTB46Q86UZ6 589 aa5.37□□□□□ -1.55
TRAPPC13-209ENST00000508304 PPP1R3BQ86XI6 285 aa5.37□□□□□ -1.55
TRAPPC13-209ENST00000508304 CHMP4AQ9BY43 222 aa5.37□□□□□ -1.55
TRAPPC13-209ENST00000508304 ASPSCR1Q9BZE9 553 aa5.37□□□□□ -1.55
TRAPPC13-209ENST00000508304 FOXP1Q9H334 677 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC13-209ENST00000508304 IL33O95760 270 aa5.36□□□□□ -1.55
TRAPPC13-209ENST00000508304 FPR3P25089 353 aa5.36□□□□□ -1.55
TRAPPC13-209ENST00000508304 KCNJ5P48544 419 aa5.36□□□□□ -1.55
TRAPPC13-209ENST00000508304 HTR6P50406 440 aa5.36□□□□□ -1.55
TRAPPC13-209ENST00000508304 ALDH5A1P51649 535 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC13-209ENST00000508304 ODF1Q14990 250 aa5.36□□□□□ -1.55
TRAPPC13-209ENST00000508304 FAM187BQ17R55 369 aa5.36□□□□□ -1.55
TRAPPC13-209ENST00000508304 TOMM40O96008 361 aa5.35□□□□□ -1.55
TRAPPC13-209ENST00000508304 S100BP04271 92 aaPredicted RBP5.35□□□□□ -1.55
TRAPPC13-209ENST00000508304 PDCP20941 246 aa5.35□□□□□ -1.55
TRAPPC13-209ENST00000508304 CCDC157Q569K6 752 aa5.35□□□□□ -1.55
TRAPPC13-209ENST00000508304 RBMXL3Q8N7X1 1067 aaKnown RBP5.35□□□□□ -1.55
TRAPPC13-209ENST00000508304 ADAMTS18Q8TE60 1221 aa5.35□□□□□ -1.55
TRAPPC13-209ENST00000508304 CHMP4CQ96CF2 233 aa5.35□□□□□ -1.55
TRAPPC13-209ENST00000508304 SIGLEC11Q96RL6 698 aa5.35□□□□□ -1.55
TRAPPC13-209ENST00000508304 ASIC5Q9NY37 505 aa5.35□□□□□ -1.55
TRAPPC13-209ENST00000508304 LUC7L2Q9Y383 392 aaKnown RBP5.35□□□□□ -1.55
TRAPPC13-209ENST00000508304 TMEM232C9JQI7 657 aa5.34□□□□□ -1.55
TRAPPC13-209ENST00000508304 SMAD6O43541 496 aaKnown RBP5.34□□□□□ -1.55
TRAPPC13-209ENST00000508304 PRKCBP05771 671 aa5.34□□□□□ -1.55
TRAPPC13-209ENST00000508304 CSF1RP07333 972 aa5.34□□□□□ -1.55
TRAPPC13-209ENST00000508304 TYRP14679 529 aa5.34□□□□□ -1.55
TRAPPC13-209ENST00000508304 EXOSC9Q06265 439 aaKnown RBP5.34□□□□□ -1.55
TRAPPC13-209ENST00000508304 SEMA3AQ14563 771 aa5.34□□□□□ -1.55
TRAPPC13-209ENST00000508304 CYP1B1Q16678 543 aa5.34□□□□□ -1.55
TRAPPC13-209ENST00000508304 BRDTQ58F21 947 aaPredicted RBP5.34□□□□□ -1.55
TRAPPC13-209ENST00000508304 TMEM240Q5SV17 173 aa5.34□□□□□ -1.55
TRAPPC13-209ENST00000508304 EMC10Q5UCC4 262 aa5.34□□□□□ -1.55
TRAPPC13-209ENST00000508304 BCDIN3DQ7Z5W3 292 aaKnown RBP5.34□□□□□ -1.55
TRAPPC13-209ENST00000508304 SLC15A3Q8IY34 581 aa5.34□□□□□ -1.55
TRAPPC13-209ENST00000508304 KRT78Q8N1N4 520 aa5.34□□□□□ -1.55
TRAPPC13-209ENST00000508304 HSPBAP1Q96EW2 488 aa5.34□□□□□ -1.55
TRAPPC13-209ENST00000508304 CCDC136Q96JN2 1154 aa5.34□□□□□ -1.55
TRAPPC13-209ENST00000508304 FYTTD1Q96QD9 318 aaKnown RBP5.34□□□□□ -1.55
TRAPPC13-209ENST00000508304 KLHL42Q9P2K6 505 aa5.34□□□□□ -1.55
TRAPPC13-209ENST00000508304 ZNF112Q9UJU3 913 aa5.34□□□□□ -1.55
TRAPPC13-209ENST00000508304 ZMYM2Q9UBW7 1377 aa5.33□□□□□ -1.56
TRAPPC13-209ENST00000508304 BTBD19C9JJ37 291 aa5.33□□□□□ -1.56
TRAPPC13-209ENST00000508304 FTLP02792 175 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC13-209ENST00000508304 CT47B1P0C2W7 299 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC13-209ENST00000508304 VIPR2P41587 438 aa5.33□□□□□ -1.56
TRAPPC13-209ENST00000508304 PDE6CP51160 858 aa5.33□□□□□ -1.56
TRAPPC13-209ENST00000508304 HSP90AB2PQ58FF8 381 aa5.33□□□□□ -1.56
TRAPPC13-209ENST00000508304 DEF8Q6ZN54 512 aa5.33□□□□□ -1.56
TRAPPC13-209ENST00000508304 USP45Q70EL2 814 aa5.33□□□□□ -1.56
TRAPPC13-209ENST00000508304 PNISRQ8TF01 805 aaKnown RBP5.33□□□□□ -1.56
TRAPPC13-209ENST00000508304 FAM167AQ96KS9 214 aa5.33□□□□□ -1.56
TRAPPC13-209ENST00000508304 AASDHPPTQ9NRN7 309 aa5.33□□□□□ -1.56
TRAPPC13-209ENST00000508304 LMBRD1Q9NUN5 540 aa5.33□□□□□ -1.56
TRAPPC13-209ENST00000508304 POT1Q9NUX5 634 aa5.33□□□□□ -1.56
TRAPPC13-209ENST00000508304 TFCP2L1Q9NZI6 479 aa5.33□□□□□ -1.56
TRAPPC13-209ENST00000508304 G3BP2Q9UN86 482 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms