RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 C7orf31Q8N865 590 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 RXFP2Q8WXD0 754 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 RNF39Q9H2S5 420 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 ZWILCHQ9H900 591 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 DCDC2CA8MYV0 355 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 SPTLC1O15269 473 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 GABBR2O75899 941 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 AGTP01019 485 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 TM4SF4P48230 202 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 SNX16P57768 344 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 MAGOHP61326 146 aaKnown RBP18.53■□□□□ 0.56
SFXN1-208ENST00000507823 SREBF2Q12772 1141 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 FAM228AQ86W67 206 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 VSIG1Q86XK7 387 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 PIWIL1Q96J94 861 aaKnown RBP18.53■□□□□ 0.56
SFXN1-208ENST00000507823 PEBP4Q96S96 227 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 CENPHQ9H3R5 247 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 ZNF148Q9UQR1 794 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 KPNA7A9QM74 516 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 OR6B2Q6IFH4 312 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 SESTD1Q86VW0 696 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 GLIS1Q8NBF1 620 aa18.53■□□□□ 0.56
SFXN1-208ENST00000507823 MTG1Q9BT17 334 aaPredicted RBP18.53■□□□□ 0.56
SFXN1-208ENST00000507823 CNOT10Q9H9A5 744 aaKnown RBP18.53■□□□□ 0.56
SFXN1-208ENST00000507823 MYADML2A6NDP7 307 aa18.52■□□□□ 0.56
SFXN1-208ENST00000507823 SLC6A3Q01959 620 aa18.52■□□□□ 0.56
SFXN1-208ENST00000507823 GUCY1A3Q02108 690 aa18.52■□□□□ 0.56
SFXN1-208ENST00000507823 SOX4Q06945 474 aaPredicted RBP18.52■□□□□ 0.56
SFXN1-208ENST00000507823 SMTNL2Q2TAL5 461 aa18.52■□□□□ 0.56
SFXN1-208ENST00000507823 DPH6Q7L8W6 267 aa18.52■□□□□ 0.56
SFXN1-208ENST00000507823 RPAINQ86UA6 219 aa18.52■□□□□ 0.56
SFXN1-208ENST00000507823 NCAPGQ9BPX3 1015 aa18.52■□□□□ 0.56
SFXN1-208ENST00000507823 EPN3Q9H201 632 aa18.52■□□□□ 0.56
SFXN1-208ENST00000507823 GTF2IRD1Q9UHL9 959 aa18.52■□□□□ 0.56
SFXN1-208ENST00000507823 TLL2Q9Y6L7 1015 aa18.52■□□□□ 0.56
SFXN1-208ENST00000507823 DCAF8L1A6NGE4 600 aa18.52■□□□□ 0.55
SFXN1-208ENST00000507823 TULP2O00295 520 aa18.52■□□□□ 0.55
SFXN1-208ENST00000507823 ECM2O94769 699 aaPredicted RBP18.52■□□□□ 0.55
SFXN1-208ENST00000507823 FGFR1P11362 822 aa18.52■□□□□ 0.55
SFXN1-208ENST00000507823 TAF6P49848 677 aa18.52■□□□□ 0.55
SFXN1-208ENST00000507823 MRPS6P82932 125 aaKnown RBP18.52■□□□□ 0.55
SFXN1-208ENST00000507823 PTGISQ16647 500 aa18.52■□□□□ 0.55
SFXN1-208ENST00000507823 P3H1Q32P28 736 aa18.52■□□□□ 0.55
SFXN1-208ENST00000507823 SV2CQ496J9 727 aa18.52■□□□□ 0.55
SFXN1-208ENST00000507823 CCDC14Q49A88 953 aa18.52■□□□□ 0.55
SFXN1-208ENST00000507823 KCNT1Q5JUK3 1230 aa18.52■□□□□ 0.55
SFXN1-208ENST00000507823 GSTA5Q7RTV2 222 aa18.52■□□□□ 0.55
SFXN1-208ENST00000507823 ANKRD52Q8NB46 1076 aa18.52■□□□□ 0.55
SFXN1-208ENST00000507823 ARRDC4Q8NCT1 418 aa18.52■□□□□ 0.55
SFXN1-208ENST00000507823 TEKT4Q8WW24 435 aa18.52■□□□□ 0.55
SFXN1-208ENST00000507823 DDX23Q9BUQ8 820 aaKnown RBP18.52■□□□□ 0.55
SFXN1-208ENST00000507823 RSAD1Q9HA92 442 aa18.52■□□□□ 0.55
SFXN1-208ENST00000507823 NINJ2Q9NZG7 142 aa18.52■□□□□ 0.55
SFXN1-208ENST00000507823 HESX1Q9UBX0 185 aa18.52■□□□□ 0.55
SFXN1-208ENST00000507823 APOC4-APOC2K7ER74 178 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 CST8O60676 142 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 APOC2P02655 101 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 PDGFRAP16234 1089 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 AUHQ13825 339 aaKnown RBP18.51■□□□□ 0.55
SFXN1-208ENST00000507823 MORF4L2Q15014 288 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 CCDC25Q86WR0 208 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 OR6B3Q8NGW1 331 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 ACTL9Q8TC94 416 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 CENPTQ96BT3 561 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 PHACTR1Q9C0D0 580 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 BCCIPQ9P287 314 aaKnown RBP eCLIP18.51■□□□□ 0.55
SFXN1-208ENST00000507823 A8MXQ7 604 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 ZNF487B1APH4 448 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 PAPSS1O43252 624 aaPredicted RBP18.51■□□□□ 0.55
SFXN1-208ENST00000507823 CA12O43570 354 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 ABHD2P08910 425 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 CD48P09326 243 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 WARSP23381 471 aaKnown RBP18.51■□□□□ 0.55
SFXN1-208ENST00000507823 HPDP32754 393 aaPredicted RBP18.51■□□□□ 0.55
SFXN1-208ENST00000507823 MMP13P45452 471 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 OTUD4Q01804 1114 aaKnown RBP18.51■□□□□ 0.55
SFXN1-208ENST00000507823 PDE4CQ08493 712 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 FOXR1Q6PIV2 292 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 TOP6BLQ8N6T0 577 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 SERPINB12Q96P63 405 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 PPP1R10Q96QC0 940 aaKnown RBP18.51■□□□□ 0.55
SFXN1-208ENST00000507823 TBCBQ99426 244 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 C11orf84Q9BUA3 381 aaPredicted RBP18.51■□□□□ 0.55
SFXN1-208ENST00000507823 APOL6Q9BWW8 343 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 STMN4Q9H169 189 aaPredicted RBP18.51■□□□□ 0.55
SFXN1-208ENST00000507823 DPEP3Q9H4B8 488 aa18.51■□□□□ 0.55
SFXN1-208ENST00000507823 TPX2Q9ULW0 747 aaKnown RBP18.51■□□□□ 0.55
SFXN1-208ENST00000507823 RASGRF2O14827 1237 aa18.5■□□□□ 0.55
SFXN1-208ENST00000507823 VPS41P49754 854 aa18.5■□□□□ 0.55
SFXN1-208ENST00000507823 BCAT1P54687 386 aa18.5■□□□□ 0.55
SFXN1-208ENST00000507823 BST2Q10589 180 aaKnown RBP18.5■□□□□ 0.55
SFXN1-208ENST00000507823 RNASEH2BQ5TBB1 312 aaKnown RBP18.5■□□□□ 0.55
SFXN1-208ENST00000507823 KCTD6Q8NC69 237 aa18.5■□□□□ 0.55
SFXN1-208ENST00000507823 FAM49BQ9NUQ9 324 aa18.5■□□□□ 0.55
SFXN1-208ENST00000507823 KLK14Q9P0G3 267 aa18.5■□□□□ 0.55
SFXN1-208ENST00000507823 PCSK1NQ9UHG2 260 aa18.5■□□□□ 0.55
SFXN1-208ENST00000507823 SHOC2Q9UQ13 582 aa18.5■□□□□ 0.55
SFXN1-208ENST00000507823 TRPV2Q9Y5S1 764 aa18.5■□□□□ 0.55
SFXN1-208ENST00000507823 PTGESO14684 152 aa18.5■□□□□ 0.55
SFXN1-208ENST00000507823 RGS16O15492 202 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms