RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 TFAP2BQ92481 460 aa21.22■□□□□ 0.99
USP53-203ENST00000507597 SMG7Q92540 1137 aaKnown RBP21.22■□□□□ 0.99
USP53-203ENST00000507597 PSMG2Q969U7 264 aa21.22■□□□□ 0.99
USP53-203ENST00000507597 HSFY1Q96LI6 401 aa21.22■□□□□ 0.99
USP53-203ENST00000507597 NECTIN4Q96NY8 510 aa21.22■□□□□ 0.99
USP53-203ENST00000507597 GCNAQ96QF7 691 aa21.22■□□□□ 0.99
USP53-203ENST00000507597 ADAM7Q9H2U9 754 aa21.22■□□□□ 0.99
USP53-203ENST00000507597 UBE2ZQ9H832 354 aaPredicted RBP21.22■□□□□ 0.99
USP53-203ENST00000507597 LRRC4Q9HBW1 653 aa21.22■□□□□ 0.99
USP53-203ENST00000507597 CYLDQ9NQC7 956 aa21.22■□□□□ 0.99
USP53-203ENST00000507597 CD207Q9UJ71 328 aa21.22■□□□□ 0.99
USP53-203ENST00000507597 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.21■□□□□ 0.99
USP53-203ENST00000507597 PAPLNO95428 1278 aa21.21■□□□□ 0.99
USP53-203ENST00000507597 LSM8O95777 96 aaKnown RBP21.21■□□□□ 0.99
USP53-203ENST00000507597 SERPING1P05155 500 aa21.21■□□□□ 0.99
USP53-203ENST00000507597 TNFAIP3P21580 790 aa21.21■□□□□ 0.99
USP53-203ENST00000507597 PRKCIP41743 596 aa21.21■□□□□ 0.99
USP53-203ENST00000507597 PPP3CCP48454 512 aa21.21■□□□□ 0.99
USP53-203ENST00000507597 PABPC1LQ4VXU2 614 aaKnown RBP21.21■□□□□ 0.99
USP53-203ENST00000507597 TDRD12Q587J7 1177 aaKnown RBP21.21■□□□□ 0.99
USP53-203ENST00000507597 RARS2Q5T160 578 aaKnown RBP21.21■□□□□ 0.99
USP53-203ENST00000507597 CLEC20AQ6ZU45 233 aa21.21■□□□□ 0.99
USP53-203ENST00000507597 GPR149Q86SP6 731 aa21.21■□□□□ 0.99
USP53-203ENST00000507597 STK32AQ8WU08 396 aa21.21■□□□□ 0.99
USP53-203ENST00000507597 CRISPLD1Q9H336 500 aa21.21■□□□□ 0.99
USP53-203ENST00000507597 ASAH2Q9NR71 780 aa21.21■□□□□ 0.99
USP53-203ENST00000507597 PRRC2BQ5JSZ5 2229 aaKnown RBP21.21■□□□□ 0.99
USP53-203ENST00000507597 TRANK1O15050 2925 aa21.21■□□□□ 0.99
USP53-203ENST00000507597 CCL16O15467 120 aa21.2■□□□□ 0.98
USP53-203ENST00000507597 RFPL2O75678 378 aa21.2■□□□□ 0.98
USP53-203ENST00000507597 PLA2G4AP47712 749 aa21.2■□□□□ 0.98
USP53-203ENST00000507597 TBX2Q13207 712 aaPredicted RBP21.2■□□□□ 0.98
USP53-203ENST00000507597 CCDC142Q17RM4 750 aa21.2■□□□□ 0.98
USP53-203ENST00000507597 AAK1Q2M2I8 961 aa21.2■□□□□ 0.98
USP53-203ENST00000507597 TMC5Q6UXY8 1006 aa21.2■□□□□ 0.98
USP53-203ENST00000507597 IRF2BP2Q7Z5L9 587 aa21.2■□□□□ 0.98
USP53-203ENST00000507597 DNAJB7Q7Z6W7 309 aaPredicted RBP21.2■□□□□ 0.98
USP53-203ENST00000507597 TTC9BQ8N6N2 239 aa21.2■□□□□ 0.98
USP53-203ENST00000507597 UBA3Q8TBC4 463 aa21.2■□□□□ 0.98
USP53-203ENST00000507597 GIPC2Q8TF65 315 aa21.2■□□□□ 0.98
USP53-203ENST00000507597 SLITRK1Q96PX8 696 aa21.2■□□□□ 0.98
USP53-203ENST00000507597 SMOQ99835 787 aa21.2■□□□□ 0.98
USP53-203ENST00000507597 AGPAT1Q99943 283 aa21.2■□□□□ 0.98
USP53-203ENST00000507597 SEPT11Q9NVA2 429 aaKnown RBP21.2■□□□□ 0.98
USP53-203ENST00000507597 MYO7AQ13402 2215 aa21.19■□□□□ 0.98
USP53-203ENST00000507597 SLC38A8A6NNN8 435 aa21.19■□□□□ 0.98
USP53-203ENST00000507597 MFAP3LO75121 409 aa21.19■□□□□ 0.98
USP53-203ENST00000507597 HNRNPH3P31942 346 aaKnown RBP21.19■□□□□ 0.98
USP53-203ENST00000507597 PDE4CQ08493 712 aa21.19■□□□□ 0.98
USP53-203ENST00000507597 ARID5BQ14865 1188 aa21.19■□□□□ 0.98
USP53-203ENST00000507597 TAF3Q5VWG9 929 aa21.19■□□□□ 0.98
USP53-203ENST00000507597 SYCE2Q6PIF2 218 aa21.19■□□□□ 0.98
USP53-203ENST00000507597 PDZD4Q76G19 769 aaPredicted RBP21.19■□□□□ 0.98
USP53-203ENST00000507597 NOP9Q86U38 636 aaKnown RBP21.19■□□□□ 0.98
USP53-203ENST00000507597 TTC30AQ86WT1 665 aa21.19■□□□□ 0.98
USP53-203ENST00000507597 PDZD8Q8NEN9 1154 aa21.19■□□□□ 0.98
USP53-203ENST00000507597 KCTD13Q8WZ19 329 aa21.19■□□□□ 0.98
USP53-203ENST00000507597 TRMT2BQ96GJ1 504 aaKnown RBP21.19■□□□□ 0.98
USP53-203ENST00000507597 KCNK16Q96T55 309 aa21.19■□□□□ 0.98
USP53-203ENST00000507597 DNAJC7Q99615 494 aa21.19■□□□□ 0.98
USP53-203ENST00000507597 CLEC1BQ9P126 229 aa21.19■□□□□ 0.98
USP53-203ENST00000507597 ZMYM5Q9UJ78 669 aa21.19■□□□□ 0.98
USP53-203ENST00000507597 MTCL1Q9Y4B5 1905 aaKnown RBP21.18■□□□□ 0.98
USP53-203ENST00000507597 SOAT2O75908 522 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 ATF6P18850 670 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 KCNA5P22460 613 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 YWHAQP27348 245 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 CDC25CP30307 473 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 GPD2P43304 727 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 CDR1P51861 262 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 GSDMDP57764 484 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 PKDCCQ504Y2 493 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 PIGZQ86VD9 579 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 SIX6OS1Q8N1H7 587 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 IPO4Q8TEX9 1081 aaKnown RBP21.18■□□□□ 0.98
USP53-203ENST00000507597 SLC35F5Q8WV83 523 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 OVCA2Q8WZ82 227 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 SECISBP2LQ93073 1101 aaKnown RBP21.18■□□□□ 0.98
USP53-203ENST00000507597 MSLNLQ96KJ4 702 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 CORO1BQ9BR76 489 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 DEF6Q9H4E7 631 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 HAUS4Q9H6D7 363 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 SYNCQ9H7C4 482 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 ACP6Q9NPH0 428 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 AVENQ9NQS1 362 aaPredicted RBP21.18■□□□□ 0.98
USP53-203ENST00000507597 ST7Q9NRC1 585 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 ABHD10Q9NUJ1 306 aa21.18■□□□□ 0.98
USP53-203ENST00000507597 NOCTQ9UK39 431 aaKnown RBP21.18■□□□□ 0.98
USP53-203ENST00000507597 MAGED2Q9UNF1 606 aaPredicted RBP21.18■□□□□ 0.98
USP53-203ENST00000507597 SART1O43290 800 aaKnown RBP21.17■□□□□ 0.98
USP53-203ENST00000507597 NRDCO43847 1150 aa21.17■□□□□ 0.98
USP53-203ENST00000507597 TBX10O75333 385 aa21.17■□□□□ 0.98
USP53-203ENST00000507597 FBXO21O94952 628 aa21.17■□□□□ 0.98
USP53-203ENST00000507597 MMEP08473 750 aa21.17■□□□□ 0.98
USP53-203ENST00000507597 LTBRP36941 435 aa21.17■□□□□ 0.98
USP53-203ENST00000507597 SLC5A3P53794 718 aa21.17■□□□□ 0.98
USP53-203ENST00000507597 RBM10P98175 930 aaKnown RBP21.17■□□□□ 0.98
USP53-203ENST00000507597 ARHGAP18Q8N392 663 aa21.17■□□□□ 0.98
USP53-203ENST00000507597 C12orf76Q8N812 135 aaPredicted RBP21.17■□□□□ 0.98
USP53-203ENST00000507597 DDX1Q92499 740 aaKnown RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms