RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, human

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-205	ENST00000507316	HDDC2	Q7Z4H3	204 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	VSTM4	Q8IW00	320 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	DHX40	Q8IX18	779 aa	Known RBP	5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	RNF169	Q8NCN4	708 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	FLAD1	Q8NFF5	587 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	LILRB4	Q8NHJ6	448 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	NPLOC4	Q8TAT6	608 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	HSPH1	Q92598	858 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	GRAMD1A	Q96CP6	724 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	LTV1	Q96GA3	475 aa	Predicted RBP	5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	ZNF333	Q96JL9	665 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	FNBP1	Q96RU3	617 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	WDR24	Q96S15	920 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	MNT	Q99583	582 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	DPH2	Q9BQC3	489 aa	Predicted RBP	5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	CENPO	Q9BU64	300 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	ISCA1	Q9BUE6	129 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	C6orf62	Q9GZU0	229 aa	Predicted RBP	5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	PANK4	Q9NVE7	773 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	HSFX1	Q9UBD0	423 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	ZNF212	Q9UDV6	495 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	ASIC3	Q9UHC3	531 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	MAPRE3	Q9UPY8	281 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	ERVK-11	Q9UQG0	969 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	DMTF1	Q9Y222	760 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	B3GNT3	Q9Y2A9	372 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	DNAJC16	Q9Y2G8	782 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	PCDHB6	Q9Y5E3	794 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	NOX1	Q9Y5S8	564 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	SLC4A4	Q9Y6R1	1079 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	ZNF536	O15090	1300 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	ITIH6	Q6UXX5	1313 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	MYO3B	Q8WXR4	1341 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	ABCC5	O15440	1437 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	NPHP4	O75161	1426 aa	Predicted RBP	5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	ASXL1	Q8IXJ9	1541 aa		5.36	□□□□□ -1.55
TUSC3-205	ENST00000507316	ADGB	Q8N7X0	1667 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	PNPLA6	Q8IY17	1366 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	ZNF804B	A4D1E1	1349 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	FAM172BP	A6NC97	362 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	IFRD1	O00458	451 aa	Predicted RBP	5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	KPNA5	O15131	536 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	AP1G1	O43747	822 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	NUAK1	O60285	661 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	SUN1	O94901	812 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	DDX58	O95786	925 aa	Known RBP	5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	ASS1	P00966	412 aa	Known RBP	5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	SERPINC1	P01008	464 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	S100B	P04271	92 aa	Predicted RBP	5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	ABCB1	P08183	1280 aa	Predicted RBP	5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	ENO2	P09104	434 aa	Predicted RBP	5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	TPBGL	P0DKB5	382 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	PYGM	P11217	842 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	MTHFD1	P11586	935 aa	Known RBP	5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	PABPC1	P11940	636 aa	Known RBP	5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	CCNB1	P14635	433 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	DDX5	P17844	614 aa	Known RBP	5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	ATF4	P18848	351 aa	Predicted RBP	5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	CDH3	P22223	829 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	TYK2	P29597	1187 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	KRT20	P35900	424 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	UBA7	P41226	1012 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	SARS	P49591	514 aa	Known RBP	5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	BCAP31	P51572	246 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	HNRNPM	P52272	730 aa	Known RBP eCLIP	5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	RAD23B	P54727	409 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	GNG2	P59768	71 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	ECT2L	Q008S8	904 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	CDR2	Q01850	454 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	GBE1	Q04446	702 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	RAD51	Q06609	339 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	ACAP2	Q15057	778 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	RGS21	Q2M5E4	152 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	LETM2	Q2VYF4	491 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	ALF	Q53S48	1182 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	AARS2	Q5JTZ9	985 aa	Known RBP	5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	TCHHL1	Q5QJ38	904 aa	Predicted RBP	5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	EGFLAM	Q63HQ2	1017 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	OLFML2B	Q68BL8	750 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	LRRC8B	Q6P9F7	803 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	C1orf228	Q6PIY5	440 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	C4orf22	Q6V702	233 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	RHOU	Q7L0Q8	258 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	CATSPER4	Q7RTX7	472 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	PIGW	Q7Z7B1	504 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	RALYL	Q86SE5	291 aa	Known RBP	5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	ADAMTSL2	Q86TH1	951 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	CDH24	Q86UP0	819 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	ZNF677	Q86XU0	584 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	STX12	Q86Y82	276 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	TMTC1	Q8IUR5	882 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	NELFCD	Q8IXH7	590 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	PALM2	Q8IXS6	379 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	IQCK	Q8N0W5	287 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	ELMOD1	Q8N336	334 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	TSPYL6	Q8N831	410 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	FAM133A	Q8N9E0	248 aa		5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	GIMAP8	Q8ND71	665 aa	Predicted RBP	5.35	□□□□□ -1.55
TUSC3-205	ENST00000507316	PDZD8	Q8NEN9	1154 aa		5.35	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms