RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 CCDC142Q17RM4 750 aa17.63■□□□□ 0.41
SNF8-205ENST00000507302 LPCAT2Q7L5N7 544 aa17.63■□□□□ 0.41
SNF8-205ENST00000507302 TOP6BLQ8N6T0 577 aa17.63■□□□□ 0.41
SNF8-205ENST00000507302 KIF2CQ99661 725 aa17.63■□□□□ 0.41
SNF8-205ENST00000507302 TTLL2Q9BWV7 592 aa17.63■□□□□ 0.41
SNF8-205ENST00000507302 NUSAP1Q9BXS6 441 aaKnown RBP17.63■□□□□ 0.41
SNF8-205ENST00000507302 IKZF4Q9H2S9 585 aa17.63■□□□□ 0.41
SNF8-205ENST00000507302 SLC32A1Q9H598 525 aa17.63■□□□□ 0.41
SNF8-205ENST00000507302 KLK13Q9UKR3 277 aa17.63■□□□□ 0.41
SNF8-205ENST00000507302 LOC400499M0QZD8 3231 aa17.63■□□□□ 0.41
SNF8-205ENST00000507302 SMG1Q96Q15 3661 aaKnown RBP17.63■□□□□ 0.41
SNF8-205ENST00000507302 ADAMTS20P59510 1910 aa17.62■□□□□ 0.41
SNF8-205ENST00000507302 HUS1O60921 280 aa17.62■□□□□ 0.41
SNF8-205ENST00000507302 ALDH1A2O94788 518 aa17.62■□□□□ 0.41
SNF8-205ENST00000507302 SEC24BO95487 1268 aa17.62■□□□□ 0.41
SNF8-205ENST00000507302 ITGB3P05106 788 aa17.62■□□□□ 0.41
SNF8-205ENST00000507302 ENGP17813 658 aa17.62■□□□□ 0.41
SNF8-205ENST00000507302 ACAT1P24752 427 aaKnown RBP17.62■□□□□ 0.41
SNF8-205ENST00000507302 POLR2BP30876 1174 aaKnown RBP17.62■□□□□ 0.41
SNF8-205ENST00000507302 LHX1P48742 406 aa17.62■□□□□ 0.41
SNF8-205ENST00000507302 MCM6Q14566 821 aa17.62■□□□□ 0.41
SNF8-205ENST00000507302 KCNB1Q14721 858 aa17.62■□□□□ 0.41
SNF8-205ENST00000507302 UAP1L1Q3KQV9 507 aa17.62■□□□□ 0.41
SNF8-205ENST00000507302 VSTM1Q6UX27 236 aa17.62■□□□□ 0.41
SNF8-205ENST00000507302 SFTPA1Q8IWL2 248 aa17.62■□□□□ 0.41
SNF8-205ENST00000507302 BRSK2Q8IWQ3 736 aa17.62■□□□□ 0.41
SNF8-205ENST00000507302 PHTF2Q8N3S3 785 aa17.62■□□□□ 0.41
SNF8-205ENST00000507302 CCDC33Q8N5R6 958 aa17.62■□□□□ 0.41
SNF8-205ENST00000507302 WHAMMQ8TF30 809 aa17.62■□□□□ 0.41
SNF8-205ENST00000507302 LHX6Q9UPM6 363 aa17.62■□□□□ 0.41
SNF8-205ENST00000507302 AGAP1Q9UPQ3 857 aa17.62■□□□□ 0.41
SNF8-205ENST00000507302 H0Y626 953 aa17.61■□□□□ 0.41
SNF8-205ENST00000507302 SGK1O00141 431 aa17.61■□□□□ 0.41
SNF8-205ENST00000507302 LEFTY2O00292 366 aa17.61■□□□□ 0.41
SNF8-205ENST00000507302 ADAM23O75077 832 aa17.61■□□□□ 0.41
SNF8-205ENST00000507302 TRIM16O95361 564 aa17.61■□□□□ 0.41
SNF8-205ENST00000507302 PLCG1P19174 1290 aa17.61■□□□□ 0.41
SNF8-205ENST00000507302 PCSK1P29120 753 aa17.61■□□□□ 0.41
SNF8-205ENST00000507302 SEC13P55735 322 aa17.61■□□□□ 0.41
SNF8-205ENST00000507302 SOWAHAQ2M3V2 549 aa17.61■□□□□ 0.41
SNF8-205ENST00000507302 DPH6Q7L8W6 267 aa17.61■□□□□ 0.41
SNF8-205ENST00000507302 ALLCQ8N6M5 410 aa17.61■□□□□ 0.41
SNF8-205ENST00000507302 FRMD1Q8N878 549 aa17.61■□□□□ 0.41
SNF8-205ENST00000507302 CALML4Q96GE6 196 aa17.61■□□□□ 0.41
SNF8-205ENST00000507302 CAPN10Q9HC96 672 aa17.61■□□□□ 0.41
SNF8-205ENST00000507302 SIX4Q9UIU6 781 aa17.61■□□□□ 0.41
SNF8-205ENST00000507302 ITGA11Q9UKX5 1188 aa17.61■□□□□ 0.41
SNF8-205ENST00000507302 GCN1Q92616 2671 aaKnown RBP17.61■□□□□ 0.41
SNF8-205ENST00000507302 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.6■□□□□ 0.41
SNF8-205ENST00000507302 HCRTO43612 131 aa17.6■□□□□ 0.41
SNF8-205ENST00000507302 UBA7P41226 1012 aa17.6■□□□□ 0.41
SNF8-205ENST00000507302 PPP3CCP48454 512 aa17.6■□□□□ 0.41
SNF8-205ENST00000507302 DHCR24Q15392 516 aa17.6■□□□□ 0.41
SNF8-205ENST00000507302 RHBDF2Q6PJF5 856 aa17.6■□□□□ 0.41
SNF8-205ENST00000507302 RAB44Q7Z6P3 723 aaPredicted RBP17.6■□□□□ 0.41
SNF8-205ENST00000507302 FILIP1Q7Z7B0 1213 aa17.6■□□□□ 0.41
SNF8-205ENST00000507302 PROSER1Q86XN7 944 aa17.6■□□□□ 0.41
SNF8-205ENST00000507302 SPATA2LQ8IUW3 424 aaPredicted RBP17.6■□□□□ 0.41
SNF8-205ENST00000507302 TMEFF1Q8IYR6 380 aa17.6■□□□□ 0.41
SNF8-205ENST00000507302 TXNDC5Q8NBS9 432 aaKnown RBP17.6■□□□□ 0.41
SNF8-205ENST00000507302 ZSWIM2Q8NEG5 633 aa17.6■□□□□ 0.41
SNF8-205ENST00000507302 KBTBD7Q8WVZ9 684 aa17.6■□□□□ 0.41
SNF8-205ENST00000507302 RLN3Q8WXF3 142 aa17.6■□□□□ 0.41
SNF8-205ENST00000507302 POMGNT1Q8WZA1 660 aa17.6■□□□□ 0.41
SNF8-205ENST00000507302 LARP4BQ92615 738 aaKnown RBP17.6■□□□□ 0.41
SNF8-205ENST00000507302 SPACA7Q96KW9 195 aa17.6■□□□□ 0.41
SNF8-205ENST00000507302 PNKPQ96T60 521 aa17.6■□□□□ 0.41
SNF8-205ENST00000507302 DUSP9Q99956 384 aaKnown RBP17.6■□□□□ 0.41
SNF8-205ENST00000507302 RNF38Q9H0F5 515 aa17.6■□□□□ 0.41
SNF8-205ENST00000507302 ZNF840PA6NDX5 716 aa17.59■□□□□ 0.41
SNF8-205ENST00000507302 MYMKA6NI61 221 aa17.59■□□□□ 0.41
SNF8-205ENST00000507302 TBCAO75347 108 aaKnown RBP17.59■□□□□ 0.41
SNF8-205ENST00000507302 KAT7O95251 611 aa17.59■□□□□ 0.41
SNF8-205ENST00000507302 OAS1P00973 400 aaKnown RBP17.59■□□□□ 0.41
SNF8-205ENST00000507302 DDIT3P35638 169 aa17.59■□□□□ 0.41
SNF8-205ENST00000507302 TNFRSF4P43489 277 aa17.59■□□□□ 0.41
SNF8-205ENST00000507302 SLC6A11P48066 632 aa17.59■□□□□ 0.41
SNF8-205ENST00000507302 USP46P62068 366 aa17.59■□□□□ 0.41
SNF8-205ENST00000507302 NOP14P78316 857 aaKnown RBP17.59■□□□□ 0.41
SNF8-205ENST00000507302 SIM1P81133 766 aaPredicted RBP17.59■□□□□ 0.41
SNF8-205ENST00000507302 TFAMQ00059 246 aaKnown RBP17.59■□□□□ 0.41
SNF8-205ENST00000507302 KCNA1Q09470 495 aa17.59■□□□□ 0.41
SNF8-205ENST00000507302 BYSLQ13895 437 aaKnown RBP17.59■□□□□ 0.41
SNF8-205ENST00000507302 DHX8Q14562 1220 aaKnown RBP17.59■□□□□ 0.41
SNF8-205ENST00000507302 EOGTQ5NDL2 527 aa17.59■□□□□ 0.41
SNF8-205ENST00000507302 LMBRD2Q68DH5 695 aaPredicted RBP17.59■□□□□ 0.41
SNF8-205ENST00000507302 KIAA1211LQ6NV74 962 aa17.59■□□□□ 0.41
SNF8-205ENST00000507302 C4orf50Q6ZRC1 276 aa17.59■□□□□ 0.41
SNF8-205ENST00000507302 C12orf40Q86WS4 652 aa17.59■□□□□ 0.41
SNF8-205ENST00000507302 ADGRF2Q8IZF7 708 aa17.59■□□□□ 0.41
SNF8-205ENST00000507302 CEP76Q8TAP6 659 aa17.59■□□□□ 0.41
SNF8-205ENST00000507302 KCNV2Q8TDN2 545 aa17.59■□□□□ 0.41
SNF8-205ENST00000507302 CACTINQ8WUQ7 758 aaKnown RBP17.59■□□□□ 0.41
SNF8-205ENST00000507302 POLMQ9NP87 494 aaPredicted RBP17.59■□□□□ 0.41
SNF8-205ENST00000507302 CRTAC1Q9NQ79 661 aa17.59■□□□□ 0.41
SNF8-205ENST00000507302 SLC6A14Q9UN76 642 aa17.59■□□□□ 0.41
SNF8-205ENST00000507302 SPAARA0A1B0GVQ0 90 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 SLC9A3R1O14745 358 aaPredicted RBP17.58■□□□□ 0.4
SNF8-205ENST00000507302 ATP2C2O75185 946 aa17.58■□□□□ 0.4
SNF8-205ENST00000507302 KLF8O95600 359 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms