RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 CLEC20AQ6ZU45 233 aa19.27■□□□□ 0.68
NPHP4-210ENST00000506941 CEP295NLQ96MC4 621 aa19.27■□□□□ 0.68
NPHP4-210ENST00000506941 CSNK1G1Q9HCP0 422 aa19.27■□□□□ 0.68
NPHP4-210ENST00000506941 GDE1Q9NZC3 331 aa19.27■□□□□ 0.68
NPHP4-210ENST00000506941 MUTYHQ9UIF7 546 aa19.27■□□□□ 0.68
NPHP4-210ENST00000506941 CNTN6Q9UQ52 1028 aa19.27■□□□□ 0.68
NPHP4-210ENST00000506941 ZFP37Q9Y6Q3 630 aaPredicted RBP19.27■□□□□ 0.68
NPHP4-210ENST00000506941 TICRRQ7Z2Z1 1910 aa19.26■□□□□ 0.67
NPHP4-210ENST00000506941 LRRC10BA6NIK2 292 aa19.26■□□□□ 0.67
NPHP4-210ENST00000506941 SMTNL1A8MU46 457 aa19.26■□□□□ 0.67
NPHP4-210ENST00000506941 ANHXE9PGG2 379 aa19.26■□□□□ 0.67
NPHP4-210ENST00000506941 TNFRSF10BO14763 440 aa19.26■□□□□ 0.67
NPHP4-210ENST00000506941 FGF19O95750 216 aa19.26■□□□□ 0.67
NPHP4-210ENST00000506941 FAM200BP0CF97 657 aa19.26■□□□□ 0.67
NPHP4-210ENST00000506941 MAP3K7CLP57077 242 aa19.26■□□□□ 0.67
NPHP4-210ENST00000506941 HTR4Q13639 388 aa19.26■□□□□ 0.67
NPHP4-210ENST00000506941 ARHGAP17Q68EM7 881 aa19.26■□□□□ 0.67
NPHP4-210ENST00000506941 DENND5BQ6ZUT9 1274 aa19.26■□□□□ 0.67
NPHP4-210ENST00000506941 RBBP8NLQ8NC74 664 aaPredicted RBP19.26■□□□□ 0.67
NPHP4-210ENST00000506941 RSAD2Q8WXG1 361 aa19.26■□□□□ 0.67
NPHP4-210ENST00000506941 TFAP2BQ92481 460 aa19.26■□□□□ 0.67
NPHP4-210ENST00000506941 ZSWIM1Q9BR11 485 aa19.26■□□□□ 0.67
NPHP4-210ENST00000506941 TTLL2Q9BWV7 592 aa19.26■□□□□ 0.67
NPHP4-210ENST00000506941 DNAI2Q9GZS0 605 aa19.26■□□□□ 0.67
NPHP4-210ENST00000506941 ATXN3LQ9H3M9 355 aa19.26■□□□□ 0.67
NPHP4-210ENST00000506941 LGALS16A8MUM7 142 aa19.25■□□□□ 0.67
NPHP4-210ENST00000506941 HHLA1C9JL84 531 aa19.25■□□□□ 0.67
NPHP4-210ENST00000506941 DLL1O00548 723 aa19.25■□□□□ 0.67
NPHP4-210ENST00000506941 PAEPP09466 180 aa19.25■□□□□ 0.67
NPHP4-210ENST00000506941 CDK11BP21127 795 aaKnown RBP19.25■□□□□ 0.67
NPHP4-210ENST00000506941 CDC25CP30307 473 aa19.25■□□□□ 0.67
NPHP4-210ENST00000506941 KLK7P49862 253 aa19.25■□□□□ 0.67
NPHP4-210ENST00000506941 MFAP3P55082 362 aa19.25■□□□□ 0.67
NPHP4-210ENST00000506941 ARHGAP44Q17R89 818 aa19.25■□□□□ 0.67
NPHP4-210ENST00000506941 SGO2Q562F6 1265 aa19.25■□□□□ 0.67
NPHP4-210ENST00000506941 PARM1Q6UWI2 310 aa19.25■□□□□ 0.67
NPHP4-210ENST00000506941 ENOSF1Q7L5Y1 443 aa19.25■□□□□ 0.67
NPHP4-210ENST00000506941 LUZP1Q86V48 1076 aa19.25■□□□□ 0.67
NPHP4-210ENST00000506941 FGF14Q92915 247 aa19.25■□□□□ 0.67
NPHP4-210ENST00000506941 JAKMIP2Q96AA8 810 aa19.25■□□□□ 0.67
NPHP4-210ENST00000506941 LSM14BQ9BX40 385 aaKnown RBP19.25■□□□□ 0.67
NPHP4-210ENST00000506941 SMOC2Q9H3U7 446 aa19.25■□□□□ 0.67
NPHP4-210ENST00000506941 KCNK12Q9HB15 430 aa19.25■□□□□ 0.67
NPHP4-210ENST00000506941 COL4A2P08572 1712 aa19.25■□□□□ 0.67
NPHP4-210ENST00000506941 BECN2A8MW95 431 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 CD19P15391 556 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 NPR3P17342 541 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 FCARP24071 287 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 PTPN21Q16825 1174 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 GOLGA7BQ2TAP0 167 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 FAM78AQ5JUQ0 283 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 KLHDC7AQ5VTJ3 777 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 GPRIN1Q7Z2K8 1008 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 TTC30AQ86WT1 665 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 NUP93Q8N1F7 819 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 ANKRD20A12PQ8NF67 263 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 SCAMP5Q8TAC9 235 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 SHC3Q92529 594 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 ASB16Q96NS5 453 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 RPP25Q9BUL9 199 aaKnown RBP19.24■□□□□ 0.67
NPHP4-210ENST00000506941 DUSP16Q9BY84 665 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 UXTQ9UBK9 157 aaPredicted RBP19.24■□□□□ 0.67
NPHP4-210ENST00000506941 DNAJC12Q9UKB3 198 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 FHOD1Q9Y613 1164 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 NUMBLQ9Y6R0 609 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 TECTAO75443 2155 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 NCANO14594 1321 aa19.24■□□□□ 0.67
NPHP4-210ENST00000506941 O00370 1275 aa19.23■□□□□ 0.67
NPHP4-210ENST00000506941 TPM2P07951 284 aa19.23■□□□□ 0.67
NPHP4-210ENST00000506941 VDRP11473 427 aa19.23■□□□□ 0.67
NPHP4-210ENST00000506941 KRT5P13647 590 aa19.23■□□□□ 0.67
NPHP4-210ENST00000506941 BRD2P25440 801 aaKnown RBP19.23■□□□□ 0.67
NPHP4-210ENST00000506941 SLC5A3P53794 718 aa19.23■□□□□ 0.67
NPHP4-210ENST00000506941 IFRD2Q12894 506 aaPredicted RBP19.23■□□□□ 0.67
NPHP4-210ENST00000506941 GPR158Q5T848 1215 aa19.23■□□□□ 0.67
NPHP4-210ENST00000506941 FAM81BQ96LP2 452 aa19.23■□□□□ 0.67
NPHP4-210ENST00000506941 GCNAQ96QF7 691 aa19.23■□□□□ 0.67
NPHP4-210ENST00000506941 KXD1Q9BQD3 176 aa19.23■□□□□ 0.67
NPHP4-210ENST00000506941 NAA15Q9BXJ9 866 aaKnown RBP19.23■□□□□ 0.67
NPHP4-210ENST00000506941 GPR88Q9GZN0 384 aa19.23■□□□□ 0.67
NPHP4-210ENST00000506941 SLITRK6Q9H5Y7 841 aa19.23■□□□□ 0.67
NPHP4-210ENST00000506941 ACP6Q9NPH0 428 aa19.23■□□□□ 0.67
NPHP4-210ENST00000506941 IL37Q9NZH6 218 aa19.23■□□□□ 0.67
NPHP4-210ENST00000506941 TSPAN16Q9UKR8 245 aa19.23■□□□□ 0.67
NPHP4-210ENST00000506941 SIK3Q9Y2K2 1263 aa19.23■□□□□ 0.67
NPHP4-210ENST00000506941 PNMA6AP0CW24 399 aaPredicted RBP19.22■□□□□ 0.67
NPHP4-210ENST00000506941 TAF10Q12962 218 aa19.22■□□□□ 0.67
NPHP4-210ENST00000506941 ARHGAP15Q53QZ3 475 aa19.22■□□□□ 0.67
NPHP4-210ENST00000506941 FKBP15Q5T1M5 1219 aa19.22■□□□□ 0.67
NPHP4-210ENST00000506941 TXNDC8Q6A555 127 aa19.22■□□□□ 0.67
NPHP4-210ENST00000506941 TANGO2Q6ICL3 276 aa19.22■□□□□ 0.67
NPHP4-210ENST00000506941 ANKRD52Q8NB46 1076 aa19.22■□□□□ 0.67
NPHP4-210ENST00000506941 ZSCAN18Q8TBC5 510 aaPredicted RBP19.22■□□□□ 0.67
NPHP4-210ENST00000506941 SLC46A2Q9BY10 475 aa19.22■□□□□ 0.67
NPHP4-210ENST00000506941 GANQ9H2C0 597 aa19.22■□□□□ 0.67
NPHP4-210ENST00000506941 TASP1Q9H6P5 420 aa19.22■□□□□ 0.67
NPHP4-210ENST00000506941 PLCB1Q9NQ66 1216 aa19.22■□□□□ 0.67
NPHP4-210ENST00000506941 IGSF9Q9P2J2 1179 aa19.22■□□□□ 0.67
NPHP4-210ENST00000506941 KIAA1257Q9ULG3 409 aa19.22■□□□□ 0.67
NPHP4-210ENST00000506941 SORCS3Q9UPU3 1222 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms