RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 ZBED6P86452 979 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 CYP27A1Q02318 531 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 TWF1Q12792 350 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 DRAP1Q14919 205 aaPredicted RBP8.95□□□□□ -0.98
PDGFC-205ENST00000506880 PKDCCQ504Y2 493 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 RAB41Q5JT25 222 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 TJAP1Q5JTD0 557 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 SCARA5Q6ZMJ2 495 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 PDZD4Q76G19 769 aaPredicted RBP8.95□□□□□ -0.98
PDGFC-205ENST00000506880 CCDC186Q7Z3E2 898 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.95□□□□□ -0.98
PDGFC-205ENST00000506880 DNAJB7Q7Z6W7 309 aaPredicted RBP8.95□□□□□ -0.98
PDGFC-205ENST00000506880 ACOT1Q86TX2 421 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 VPS36Q86VN1 386 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 MON1AQ86VX9 555 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 DDX42Q86XP3 938 aaKnown RBP eCLIP8.95□□□□□ -0.98
PDGFC-205ENST00000506880 ADHFE1Q8IWW8 467 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 ATAD1Q8NBU5 361 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 C1orf131Q8NDD1 294 aaKnown RBP8.95□□□□□ -0.98
PDGFC-205ENST00000506880 VCPIP1Q96JH7 1222 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 B3GALT6Q96L58 329 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 ASB2Q96Q27 587 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 CRACR2AQ9BSW2 395 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 LSM14BQ9BX40 385 aaKnown RBP8.95□□□□□ -0.98
PDGFC-205ENST00000506880 B3GNT5Q9BYG0 378 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 SDCBP2Q9H190 292 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 IGFLR1Q9H665 355 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 ASNSD1Q9NWL6 643 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 RRN3Q9NYV6 651 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 CLIC5Q9NZA1 410 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 CAPN11Q9UMQ6 739 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 SCML2Q9UQR0 700 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 USP15Q9Y4E8 981 aaPredicted RBP8.95□□□□□ -0.98
PDGFC-205ENST00000506880 USP3Q9Y6I4 520 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 REV3LO60673 3130 aa8.95□□□□□ -0.98
PDGFC-205ENST00000506880 HELZP42694 1942 aaKnown RBP8.94□□□□□ -0.98
PDGFC-205ENST00000506880 MYO10Q9HD67 2058 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 GOLGA6L6A8MZA4 724 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 TULP1O00294 542 aaPredicted RBP8.94□□□□□ -0.98
PDGFC-205ENST00000506880 TNFRSF10BO14763 440 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 AP1G2O75843 785 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 SEC24AO95486 1093 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 VNN2O95498 520 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 RHOP08100 348 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 GZMAP12544 262 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 KRT5P13647 590 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 CD58P19256 250 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 BDNFP23560 247 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 IGFBP6P24592 240 aaPredicted RBP8.94□□□□□ -0.98
PDGFC-205ENST00000506880 YWHAQP27348 245 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 CDC25BP30305 580 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 KRT9P35527 623 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 KPNA1P52294 538 aaPredicted RBP8.94□□□□□ -0.98
PDGFC-205ENST00000506880 GSCP56915 257 aaPredicted RBP8.94□□□□□ -0.98
PDGFC-205ENST00000506880 POLR2FP61218 127 aaKnown RBP8.94□□□□□ -0.98
PDGFC-205ENST00000506880 CDK17Q00537 523 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 NNTQ13423 1086 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 TSR1Q2NL82 804 aaKnown RBP8.94□□□□□ -0.98
PDGFC-205ENST00000506880 PM20D1Q6GTS8 502 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 PTCRAQ6ISU1 281 aaPredicted RBP8.94□□□□□ -0.98
PDGFC-205ENST00000506880 CLEC20AQ6ZU45 233 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 CNGA4Q8IV77 575 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 ARHGEF19Q8IW93 802 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 TMEM35BQ8NCS4 154 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 SLC2A14Q8TDB8 520 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 SLC35F5Q8WV83 523 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 UBE2Q2Q8WVN8 375 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 ZNF606Q8WXB4 792 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 MRPS31Q92665 395 aaKnown RBP8.94□□□□□ -0.98
PDGFC-205ENST00000506880 MSANTD3Q96H12 275 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 PCMTD1Q96MG8 357 aaPredicted RBP8.94□□□□□ -0.98
PDGFC-205ENST00000506880 SEPT5Q99719 369 aaPredicted RBP8.94□□□□□ -0.98
PDGFC-205ENST00000506880 MED10Q9BTT4 135 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 TTYH3Q9C0H2 523 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 TRPV5Q9NQA5 729 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 TLR8Q9NR97 1041 aaKnown RBP8.94□□□□□ -0.98
PDGFC-205ENST00000506880 KRT82Q9NSB4 513 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 OLA1Q9NTK5 396 aaKnown RBP8.94□□□□□ -0.98
PDGFC-205ENST00000506880 TRPM5Q9NZQ8 1165 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 WDR35Q9P2L0 1181 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 LCMT1Q9UIC8 334 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 CDH7Q9ULB5 785 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 STRIP2Q9ULQ0 834 aa8.94□□□□□ -0.98
PDGFC-205ENST00000506880 LUC7L2Q9Y383 392 aaKnown RBP8.94□□□□□ -0.98
PDGFC-205ENST00000506880 LOC730098B7Z3J9 87 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 F8VP50 259 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 FOXN3O00409 490 aaPredicted RBP8.93□□□□□ -0.98
PDGFC-205ENST00000506880 GABBR2O75899 941 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 ZDHHC11BP0C7U3 371 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 CD19P15391 556 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 HMGA1P17096 107 aaKnown RBP8.93□□□□□ -0.98
PDGFC-205ENST00000506880 ATF6P18850 670 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 FSHRP23945 695 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 ACAT1P24752 427 aaKnown RBP8.93□□□□□ -0.98
PDGFC-205ENST00000506880 CYP2F1P24903 491 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 KIF11P52732 1056 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 ARPP19P56211 112 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 PSMC1P62191 440 aaKnown RBP8.93□□□□□ -0.98
PDGFC-205ENST00000506880 PLCB2Q00722 1185 aa8.93□□□□□ -0.98
PDGFC-205ENST00000506880 GOLGA8FQ08AF8 430 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms