RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 CYP2F1P24903 491 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 MPLP40238 635 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 IFNAR2P48551 515 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 PDE6CP51160 858 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 CDR1P51861 262 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 RBP5P82980 135 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 KCNA1Q09470 495 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 USP4Q13107 963 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 ELF2Q15723 593 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 KLHL40Q2TBA0 621 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 STPG1Q5TH74 334 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 FAM171BQ6P995 826 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 UNC13DQ70J99 1090 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 C11orf74Q86VG3 221 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 SPATA2LQ8IUW3 424 aaPredicted RBP12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 CCDC65Q8IXS2 484 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 CSGALNACT2Q8N6G5 542 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 ERCC4Q92889 916 aaPredicted RBP12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 LSM14BQ9BX40 385 aaKnown RBP12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 IKZF4Q9H2S9 585 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 PANK4Q9NVE7 773 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 RBAKQ9NYW8 714 aaPredicted RBP12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 GCNT4Q9P109 453 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 GTF3C4Q9UKN8 822 aa12.11□□□□□ -0.47
CCHCR1-220ENST00000506831 CHD6Q8TD26 2715 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 ABCA7Q8IZY2 2146 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 ZFHX4Q86UP3 3567 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 FRMD3A2A2Y4 597 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 KLRC4O43908 158 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 CKMP06732 381 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 WNT7BP56706 349 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 DMC1Q14565 340 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 MAPRE1Q15691 268 aaKnown RBP12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 EML3Q32P44 896 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 CCDC183Q5T5S1 534 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 N4BP2L1Q5TBK1 243 aaPredicted RBP12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 SDHAF4Q5VUM1 108 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 CAVIN1Q6NZI2 390 aaKnown RBP12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 VSTM1Q6UX27 236 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 C4orf50Q6ZRC1 276 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 LIMS2Q7Z4I7 341 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 RPLP0P6Q8NHW5 317 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 SPATA17Q96L03 361 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 CYP2S1Q96SQ9 504 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 DUSP15Q9H1R2 295 aaPredicted RBP12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 RXFP3Q9NSD7 469 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 EHD2Q9NZN4 543 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 ARHGAP26Q9UNA1 814 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 SNX9Q9Y5X1 595 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 NUP205Q92621 2012 aa12.1□□□□□ -0.47
CCHCR1-220ENST00000506831 MYO16Q9Y6X6 1858 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 PVALEFA0A1B0GWK0 134 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 SMC2O95347 1197 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 GCNT3O95395 438 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 RPN1P04843 607 aaKnown RBP12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 FAM163BP0C2L3 166 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 HDCP19113 662 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 ACAT1P24752 427 aaKnown RBP12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 PPP3CCP48454 512 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 MYO1EQ12965 1108 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 KCNB1Q14721 858 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 SURF1Q15526 300 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 CCDC6Q16204 474 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 SOWAHAQ2M3V2 549 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 SKOR2Q2VWA4 1001 aaPredicted RBP12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 KMT5BQ4FZB7 885 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 OSTM1Q86WC4 334 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 ADGRF2Q8IZF7 708 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 SYCP3Q8IZU3 236 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 STKLD1Q8NE28 680 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 EZH1Q92800 747 aaPredicted RBP12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 SMARCE1Q969G3 411 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 CCDC47Q96A33 483 aaKnown RBP12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 SYAP1Q96A49 352 aaPredicted RBP12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 SAAL1Q96ER3 474 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 HHIPQ96QV1 700 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 SLC22A12Q96S37 553 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 EXOC1Q9NV70 894 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 TMEM63CQ9P1W3 806 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 MAGEC2Q9UBF1 373 aaPredicted RBP12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 SIX4Q9UIU6 781 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 CDH9Q9ULB4 789 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 R3HCC1Q9Y3T6 440 aaKnown RBP12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 PCDHA5Q9Y5H7 936 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 CFAP47Q6ZTR5 3102 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 LAMA1P25391 3075 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 KIAA1549LQ6ZVL6 1849 aa12.09□□□□□ -0.47
CCHCR1-220ENST00000506831 BCLAF3A2AJT9 711 aaKnown RBP12.08□□□□□ -0.48
CCHCR1-220ENST00000506831 KCNK5O95279 499 aa12.08□□□□□ -0.48
CCHCR1-220ENST00000506831 NFATC1O95644 943 aa12.08□□□□□ -0.48
CCHCR1-220ENST00000506831 CAVIN2O95810 425 aa12.08□□□□□ -0.48
CCHCR1-220ENST00000506831 KRT19P08727 400 aa12.08□□□□□ -0.48
CCHCR1-220ENST00000506831 TMEM191BP0C7N4 346 aa12.08□□□□□ -0.48
CCHCR1-220ENST00000506831 USP39Q53GS9 565 aaKnown RBP12.08□□□□□ -0.48
CCHCR1-220ENST00000506831 FAM26FQ5R3K3 315 aa12.08□□□□□ -0.48
CCHCR1-220ENST00000506831 RNF43Q68DV7 783 aa12.08□□□□□ -0.48
CCHCR1-220ENST00000506831 NAIF1Q69YI7 327 aaPredicted RBP12.08□□□□□ -0.48
CCHCR1-220ENST00000506831 RASSF3Q86WH2 238 aa12.08□□□□□ -0.48
CCHCR1-220ENST00000506831 GPD1LQ8N335 351 aa12.08□□□□□ -0.48
CCHCR1-220ENST00000506831 ARL14EPQ8N8R7 260 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms