RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 SF3A3Q12874 501 aaKnown RBP eCLIP13.9□□□□□ -0.18
CCSER1-205ENST00000505073 CYP4A22Q5TCH4 519 aa13.9□□□□□ -0.18
CCSER1-205ENST00000505073 ADAT2Q7Z6V5 191 aaKnown RBP13.9□□□□□ -0.18
CCSER1-205ENST00000505073 RNF180Q86T96 592 aa13.9□□□□□ -0.18
CCSER1-205ENST00000505073 PCSK9Q8NBP7 692 aaKnown RBP13.9□□□□□ -0.18
CCSER1-205ENST00000505073 AGAP11Q8TF27 550 aa13.9□□□□□ -0.18
CCSER1-205ENST00000505073 VCPIP1Q96JH7 1222 aa13.9□□□□□ -0.18
CCSER1-205ENST00000505073 HEXIM2Q96MH2 286 aaKnown RBP13.9□□□□□ -0.18
CCSER1-205ENST00000505073 NAP1L3Q99457 506 aaPredicted RBP13.9□□□□□ -0.18
CCSER1-205ENST00000505073 MRPL45Q9BRJ2 306 aaKnown RBP13.9□□□□□ -0.18
CCSER1-205ENST00000505073 TJP2Q9UDY2 1190 aa13.9□□□□□ -0.18
CCSER1-205ENST00000505073 CYTH4Q9UIA0 394 aa13.9□□□□□ -0.18
CCSER1-205ENST00000505073 BARX2Q9UMQ3 279 aaPredicted RBP13.9□□□□□ -0.18
CCSER1-205ENST00000505073 L3MBTL1Q9Y468 752 aa13.9□□□□□ -0.18
CCSER1-205ENST00000505073 SMIM23A6NLE4 172 aa13.89□□□□□ -0.19
CCSER1-205ENST00000505073 MIF4GDA9UHW6 222 aaKnown RBP13.89□□□□□ -0.19
CCSER1-205ENST00000505073 INHAP05111 366 aa13.89□□□□□ -0.19
CCSER1-205ENST00000505073 NQO1P15559 274 aaKnown RBP13.89□□□□□ -0.19
CCSER1-205ENST00000505073 PEX5P50542 639 aa13.89□□□□□ -0.19
CCSER1-205ENST00000505073 ACLYP53396 1101 aa13.89□□□□□ -0.19
CCSER1-205ENST00000505073 NCALDP61601 193 aa13.89□□□□□ -0.19
CCSER1-205ENST00000505073 ITGA7Q13683 1181 aa13.89□□□□□ -0.19
CCSER1-205ENST00000505073 DHX34Q14147 1143 aaKnown RBP13.89□□□□□ -0.19
CCSER1-205ENST00000505073 ZKSCAN8Q15776 578 aaPredicted RBP13.89□□□□□ -0.19
CCSER1-205ENST00000505073 C6orf118Q5T5N4 469 aa13.89□□□□□ -0.19
CCSER1-205ENST00000505073 PLEKHA7Q6IQ23 1121 aa13.89□□□□□ -0.19
CCSER1-205ENST00000505073 UBL4BQ8N7F7 174 aa13.89□□□□□ -0.19
CCSER1-205ENST00000505073 ZFP42Q96MM3 310 aa13.89□□□□□ -0.19
CCSER1-205ENST00000505073 CARD9Q9H257 536 aa13.89□□□□□ -0.19
CCSER1-205ENST00000505073 PDCD11Q14690 1871 aaKnown RBP13.89□□□□□ -0.19
CCSER1-205ENST00000505073 IFI35P80217 286 aaPredicted RBP13.89□□□□□ -0.19
CCSER1-205ENST00000505073 INCA1Q0VD86 236 aa13.89□□□□□ -0.19
CCSER1-205ENST00000505073 XKR4Q5GH76 650 aa13.89□□□□□ -0.19
CCSER1-205ENST00000505073 ZDHHC24Q6UX98 284 aa13.89□□□□□ -0.19
CCSER1-205ENST00000505073 ERICH1Q86X53 443 aa13.89□□□□□ -0.19
CCSER1-205ENST00000505073 ZNF784Q8NCA9 323 aaPredicted RBP13.89□□□□□ -0.19
CCSER1-205ENST00000505073 WNT8AQ9H1J5 351 aa13.89□□□□□ -0.19
CCSER1-205ENST00000505073 MED7O43513 233 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 MICAL2O94851 1124 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 UBOX5O94941 541 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 OAS1P00973 400 aaKnown RBP13.88□□□□□ -0.19
CCSER1-205ENST00000505073 KCNE1P15382 129 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 CD52P31358 61 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 CDH5P33151 784 aaPredicted RBP13.88□□□□□ -0.19
CCSER1-205ENST00000505073 PLTPP55058 493 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 PTPN20Q4JDL3 420 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 BZW1Q7L1Q6 419 aaKnown RBP13.88□□□□□ -0.19
CCSER1-205ENST00000505073 JAMLQ86YT9 394 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 ZNF296Q8WUU4 475 aaPredicted RBP13.88□□□□□ -0.19
CCSER1-205ENST00000505073 LPPQ93052 612 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 STMN4Q9H169 189 aaPredicted RBP13.88□□□□□ -0.19
CCSER1-205ENST00000505073 RASAL2Q9UJF2 1139 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 NOD1Q9Y239 953 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 NME7Q9Y5B8 376 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 PTGESO14684 152 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 SPTLC1O15269 473 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 SNX3O60493 162 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 CALB1P05937 261 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 RARAP10276 462 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 CALRP27797 417 aaKnown RBP13.88□□□□□ -0.19
CCSER1-205ENST00000505073 DRG2P55039 364 aaKnown RBP13.88□□□□□ -0.19
CCSER1-205ENST00000505073 RPL7AP62424 266 aaKnown RBP13.88□□□□□ -0.19
CCSER1-205ENST00000505073 KCNJ2P63252 427 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 SLC29A2Q14542 456 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 NAIF1Q69YI7 327 aaPredicted RBP13.88□□□□□ -0.19
CCSER1-205ENST00000505073 LRRC52Q8N7C0 313 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 C12orf29Q8N999 325 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 UBA3Q8TBC4 463 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 FBXO25Q8TCJ0 367 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 TMEM109Q9BVC6 243 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 ZNF518BQ9C0D4 1074 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 MRPL47Q9HD33 250 aaKnown RBP13.88□□□□□ -0.19
CCSER1-205ENST00000505073 ERVK-5Q9HDB9 667 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 FAM105AQ9NUU6 356 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 PARVAQ9NVD7 372 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 CACNG4Q9UBN1 327 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 SNX24Q9Y343 169 aa13.88□□□□□ -0.19
CCSER1-205ENST00000505073 M0QYV0 167 aa13.87□□□□□ -0.19
CCSER1-205ENST00000505073 PIRO00625 290 aa13.87□□□□□ -0.19
CCSER1-205ENST00000505073 HCRTO43612 131 aa13.87□□□□□ -0.19
CCSER1-205ENST00000505073 PYGMP11217 842 aa13.87□□□□□ -0.19
CCSER1-205ENST00000505073 CYP3A5P20815 502 aa13.87□□□□□ -0.19
CCSER1-205ENST00000505073 IFNAR2P48551 515 aa13.87□□□□□ -0.19
CCSER1-205ENST00000505073 AFF1P51825 1210 aaKnown RBP13.87□□□□□ -0.19
CCSER1-205ENST00000505073 GRIK3Q13003 919 aa13.87□□□□□ -0.19
CCSER1-205ENST00000505073 LLGL1Q15334 1064 aa13.87□□□□□ -0.19
CCSER1-205ENST00000505073 CLUL1Q15846 466 aa13.87□□□□□ -0.19
CCSER1-205ENST00000505073 PPP1R2P3Q6NXS1 205 aa13.87□□□□□ -0.19
CCSER1-205ENST00000505073 FEZF2Q8TBJ5 459 aa13.87□□□□□ -0.19
CCSER1-205ENST00000505073 PXYLP1Q8TE99 480 aa13.87□□□□□ -0.19
CCSER1-205ENST00000505073 NT5C1AQ9BXI3 368 aa13.87□□□□□ -0.19
CCSER1-205ENST00000505073 ECT2Q9H8V3 914 aa13.87□□□□□ -0.19
CCSER1-205ENST00000505073 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCSER1-205ENST00000505073 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCSER1-205ENST00000505073 USTQ9Y2C2 406 aa13.87□□□□□ -0.19
CCSER1-205ENST00000505073 PCDHA3Q9Y5H8 950 aa13.87□□□□□ -0.19
CCSER1-205ENST00000505073 SCINQ9Y6U3 715 aa13.87□□□□□ -0.19
CCSER1-205ENST00000505073 O00370 1275 aa13.87□□□□□ -0.19
CCSER1-205ENST00000505073 SKAP2O75563 359 aaPredicted RBP13.87□□□□□ -0.19
CCSER1-205ENST00000505073 PROSCO94903 275 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms