RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 ZPBP2Q6X784 338 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 SLCO6A1Q86UG4 719 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 CD302Q8IX05 232 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 ADGRG2Q8IZP9 1017 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 ZNF843Q8N446 348 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 KCTD17Q8N5Z5 321 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 MAB21L3Q8N8X9 362 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 CEP120Q8N960 986 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 IL17RCQ8NAC3 791 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 RIN3Q8TB24 985 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 MDM1Q8TC05 714 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 LEO1Q8WVC0 666 aaPredicted RBP6.5□□□□□ -1.37
GYPB-204ENST00000504951 DNASE2BQ8WZ79 361 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 MRPS31Q92665 395 aaKnown RBP6.5□□□□□ -1.37
GYPB-204ENST00000504951 C18orf25Q96B23 403 aaPredicted RBP6.5□□□□□ -1.37
GYPB-204ENST00000504951 PGLYRP2Q96PD5 576 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 CDC6Q99741 560 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 TIPINQ9BVW5 301 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 TMEM60Q9H2L4 133 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 POLD4Q9HCU8 107 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 ABCB6Q9NP58 842 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 DUS2Q9NX74 493 aaKnown RBP6.5□□□□□ -1.37
GYPB-204ENST00000504951 GCNT4Q9P109 453 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 ORC3Q9UBD5 711 aaPredicted RBP6.5□□□□□ -1.37
GYPB-204ENST00000504951 SUSD2Q9UGT4 822 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 PCOLCE2Q9UKZ9 415 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 CFAP46Q8IYW2 2715 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 ZNF462Q96JM2 2506 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 CITO14578 2027 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 COL6A6A6NMZ7 2263 aa6.5□□□□□ -1.37
GYPB-204ENST00000504951 PTPRBP23467 1997 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 TEX51A0A1B0GUA7 166 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 ANO9A1A5B4 782 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 TRABD2BA6NFA1 517 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 J3QKU1 62 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 PIRO00625 290 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 CAPN9O14815 690 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 JAK2O60674 1132 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 ZNF217O75362 1048 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 MED24O75448 989 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 CDKL5O76039 1030 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 NOL4O94818 638 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 CLTAP09496 248 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 OR4Q2P0C623 313 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 CDK4P11802 303 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 ODC1P11926 461 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 HNRNPLP14866 589 aaKnown RBP eCLIP6.49□□□□□ -1.371e-6■■■□□ 17.3
GYPB-204ENST00000504951 KRT2P35908 639 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 TXKP42681 527 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 NPTX2P47972 431 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 IFNAR2P48551 515 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 ZNF33AQ06730 810 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 ST3GAL1Q11201 340 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 SMAD1Q15797 465 aaKnown RBP6.49□□□□□ -1.37
GYPB-204ENST00000504951 PREPLQ4J6C6 727 aaPredicted RBP6.49□□□□□ -1.37
GYPB-204ENST00000504951 SPATA1Q5VX52 437 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 TXNDC8Q6A555 127 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 TAS1R3Q7RTX0 852 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 TRMT11Q7Z4G4 463 aaKnown RBP6.49□□□□□ -1.37
GYPB-204ENST00000504951 NAXDQ8IW45 347 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 TMEFF1Q8IYR6 380 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 CACTIN-AS1Q8N1I8 211 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 ERMNQ8TAM6 284 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 SPATA18Q8TC71 538 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 SPIRE2Q8WWL2 714 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 FOXJ1Q92949 421 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 SENP8Q96LD8 212 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 TPSD1Q9BZJ3 242 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 NXF1Q9UBU9 619 aaKnown RBP6.49□□□□□ -1.37
GYPB-204ENST00000504951 ARHGAP26Q9UNA1 814 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 INVSQ9Y283 1065 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 DERAQ9Y315 318 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 STARD13Q9Y3M8 1113 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 MYO16Q9Y6X6 1858 aa6.49□□□□□ -1.37
GYPB-204ENST00000504951 PTPRQQ9UMZ3 2332 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 MYO18BQ8IUG5 2567 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 ARHGEF35A5YM69 484 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 MYMKA6NI61 221 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 CYSRT1A8MQ03 144 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.48□□□□□ -1.37
GYPB-204ENST00000504951 SLC9A3R1O14745 358 aaPredicted RBP6.48□□□□□ -1.37
GYPB-204ENST00000504951 NEMFO60524 1076 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 ADAM23O75077 832 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 CFIP05156 583 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 NFICP08651 508 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 GNSP15586 552 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 JUNDP17535 347 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 CDC25AP30304 524 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 GRIA2P42262 883 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 ABCG1P45844 678 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 PPP3CCP48454 512 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 DMP1Q13316 513 aaPredicted RBP6.48□□□□□ -1.37
GYPB-204ENST00000504951 NOLC1Q14978 699 aaKnown RBP eCLIP6.48□□□□□ -1.37
GYPB-204ENST00000504951 TAF12Q16514 161 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 NFE2Q16621 373 aaPredicted RBP6.48□□□□□ -1.37
GYPB-204ENST00000504951 C2orf27AQ580R0 203 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 NAIF1Q69YI7 327 aaPredicted RBP6.48□□□□□ -1.37
GYPB-204ENST00000504951 IL27RAQ6UWB1 636 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 DSTYKQ6XUX3 929 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms