RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 SDCBP2Q9H190 292 aa14.07□□□□□ -0.16
DDX41-204ENST00000504807 GOLPH3LQ9H4A5 285 aa14.07□□□□□ -0.16
DDX41-204ENST00000504807 LAMA1P25391 3075 aa14.07□□□□□ -0.16
DDX41-204ENST00000504807 PVALEFA0A1B0GWK0 134 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 C2orf78A6NCI8 922 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 ANTXRLA6NF34 631 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 SPECC1L-ADORA2AF8WAN1 911 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 K7ESF4 209 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 KIAA0391O15091 583 aaKnown RBP14.06□□□□□ -0.16
DDX41-204ENST00000504807 HSP90AA1P07900 732 aaKnown RBP14.06□□□□□ -0.16
DDX41-204ENST00000504807 PDGFRBP09619 1106 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 SLFN14P0C7P3 912 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 ARSAP15289 507 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 WARSP23381 471 aaKnown RBP14.06□□□□□ -0.16
DDX41-204ENST00000504807 CTHP32929 405 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 MYL6P60660 151 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 AMPD3Q01432 767 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 TSPY1Q01534 308 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 VEPH1Q14D04 833 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 DUOXA2Q1HG44 320 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 KMT5BQ4FZB7 885 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 CFAP221Q4G0U5 840 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 C1orf220Q5T0J3 134 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 SH3PXD2AQ5TCZ1 1133 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 C12orf56Q8IXR9 622 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 TMEM86AQ8N2M4 240 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 XXYLT1Q8NBI6 393 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 BPIFB1Q8TDL5 484 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 FAM83CQ9BQN1 747 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 SYT15Q9BQS2 421 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 LRRC27Q9C0I9 530 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 KCTD10Q9H3F6 313 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 MAGEF1Q9HAY2 307 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 FBRSL1Q9HCM7 1045 aaKnown RBP14.06□□□□□ -0.16
DDX41-204ENST00000504807 POLR3BQ9NW08 1133 aaPredicted RBP14.06□□□□□ -0.16
DDX41-204ENST00000504807 DMAC2Q9NW81 257 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 UBE4BO95155 1302 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 FREM2Q5SZK8 3169 aa14.06□□□□□ -0.16
DDX41-204ENST00000504807 PTPRDP23468 1912 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 GREB1Q4ZG55 1949 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 LRRIQ3A6PVS8 624 aaPredicted RBP14.05□□□□□ -0.16
DDX41-204ENST00000504807 EPN2O95208 641 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 VNN1O95497 513 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 TNNC2P02585 160 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 BDNFP23560 247 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 CDC25CP30307 473 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 RAP1GAPP47736 663 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 NDUFA8P51970 172 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 MYL7Q01449 175 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 SMARCB1Q12824 385 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 PON2Q15165 354 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 NFE2Q16621 373 aaPredicted RBP14.05□□□□□ -0.16
DDX41-204ENST00000504807 KNOP1Q1ED39 458 aaKnown RBP14.05□□□□□ -0.16
DDX41-204ENST00000504807 ARHGAP15Q53QZ3 475 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 TDRD10Q5VZ19 366 aaKnown RBP14.05□□□□□ -0.16
DDX41-204ENST00000504807 PDZD3Q86UT5 571 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 SCN4BQ8IWT1 228 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 YAF2Q8IY57 180 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 SPEM1Q8N4L4 309 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 PCED1BQ96HM7 432 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 MYRFLQ96LU7 910 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 ABCB6Q9NP58 842 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 GKN1Q9NS71 199 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 OBP2AQ9NY56 170 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 FAM13BQ9NYF5 915 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 GCNT4Q9P109 453 aa14.05□□□□□ -0.16
DDX41-204ENST00000504807 C4orf47A7E2U8 309 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 CYSRT1A8MQ03 144 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 CLDN5O00501 218 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 FGF19O95750 216 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 LHX1P48742 406 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 KPNA1P52294 538 aaPredicted RBP14.04□□□□□ -0.16
DDX41-204ENST00000504807 CDH8P55286 799 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 ARHGAP29Q52LW3 1261 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 MDH1BQ5I0G3 518 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 ATL3Q6DD88 541 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 STXBP4Q6ZWJ1 553 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 KBTBD6Q86V97 674 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 MON1AQ86VX9 555 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 SPATA2LQ8IUW3 424 aaPredicted RBP14.04□□□□□ -0.16
DDX41-204ENST00000504807 EZH1Q92800 747 aaPredicted RBP14.04□□□□□ -0.16
DDX41-204ENST00000504807 E2F7Q96AV8 911 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 TRMT2BQ96GJ1 504 aaKnown RBP14.04□□□□□ -0.16
DDX41-204ENST00000504807 MMS19Q96T76 1030 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 EDEM2Q9BV94 578 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 EBF3Q9H4W6 596 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 SMYD3Q9H7B4 428 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 GDPD2Q9HCC8 539 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 KIAA1586Q9HCI6 787 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 CDH9Q9ULB4 789 aa14.04□□□□□ -0.16
DDX41-204ENST00000504807 ANAPC1Q9H1A4 1944 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 FAM237AA0A1B0GTK4 181 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 EIF4E1BA6NMX2 242 aaKnown RBP14.03□□□□□ -0.16
DDX41-204ENST00000504807 DPYSL4O14531 572 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 HYAL3O43820 417 aaPredicted RBP14.03□□□□□ -0.16
DDX41-204ENST00000504807 CSH1P0DML2 217 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 CSH2P0DML3 217 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 TNNI1P19237 187 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 CMA1P23946 247 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 MPLP40238 635 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms