RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 TNNC1P63316 161 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 FAM160A1Q05DH4 1040 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 USP4Q13107 963 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 TRPC3Q13507 836 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 MTF1Q14872 753 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 TMEM196Q5HYL7 178 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 C1orf220Q5T0J3 134 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 VSTM1Q6UX27 236 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 SCARA5Q6ZMJ2 495 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 PAQR9Q6ZVX9 377 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 SH3RF2Q8TEC5 729 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 SPATA32Q96LK8 384 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 IER2Q9BTL4 223 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 FAM126AQ9BYI3 521 aaPredicted RBP13.64□□□□□ -0.23
RNF4-206ENST00000504782 RNF38Q9H0F5 515 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 GOLPH3LQ9H4A5 285 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 KIF9Q9HAQ2 790 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 PARD6AQ9NPB6 346 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.64□□□□□ -0.23
RNF4-206ENST00000504782 CGNQ9P2M7 1197 aaKnown RBP13.64□□□□□ -0.23
RNF4-206ENST00000504782 ZMYM5Q9UJ78 669 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 MYOFQ9NZM1 2061 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 MYH10P35580 1976 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 SOBPA7XYQ1 873 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 A8MXQ7 604 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 TRDMT1O14717 391 aaKnown RBP13.63□□□□□ -0.23
RNF4-206ENST00000504782 SCAMP3O14828 347 aaKnown RBP13.63□□□□□ -0.23
RNF4-206ENST00000504782 STAU1O95793 577 aaKnown RBP13.63□□□□□ -0.23
RNF4-206ENST00000504782 RPN1P04843 607 aaKnown RBP13.63□□□□□ -0.23
RNF4-206ENST00000504782 HDCP19113 662 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 GJA4P35212 333 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 NRLP54845 237 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 CLDN10P78369 228 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 IFRD2Q12894 506 aaPredicted RBP13.63□□□□□ -0.23
RNF4-206ENST00000504782 ORC1Q13415 861 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 BIRC3Q13489 604 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 MAPRE1Q15691 268 aaKnown RBP13.63□□□□□ -0.23
RNF4-206ENST00000504782 EML3Q32P44 896 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 SPOPLQ6IQ16 392 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 CC2D1AQ6P1N0 951 aaPredicted RBP13.63□□□□□ -0.23
RNF4-206ENST00000504782 C1orf228Q6PIY5 440 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 DENND5BQ6ZUT9 1274 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 B3GALNT2Q8NCR0 500 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 OSCP1Q8WVF1 389 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 KCNK16Q96T55 309 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 TTLL2Q9BWV7 592 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 ECT2Q9H8V3 914 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 GDPD2Q9HCC8 539 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 DUS2Q9NX74 493 aaKnown RBP13.63□□□□□ -0.23
RNF4-206ENST00000504782 MAPK8IP1Q9UQF2 711 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 RALGAPA1Q6GYQ0 2036 aa13.63□□□□□ -0.23
RNF4-206ENST00000504782 ZNF840PA6NDX5 716 aa13.62□□□□□ -0.23
RNF4-206ENST00000504782 PAPSS2O95340 614 aaPredicted RBP13.62□□□□□ -0.23
RNF4-206ENST00000504782 NR3C1P04150 777 aa13.62□□□□□ -0.23
RNF4-206ENST00000504782 ANXA13P27216 316 aa13.62□□□□□ -0.23
RNF4-206ENST00000504782 ATICP31939 592 aa13.62□□□□□ -0.23
RNF4-206ENST00000504782 SYKP43405 635 aa13.62□□□□□ -0.23
RNF4-206ENST00000504782 KRT85P78386 507 aa13.62□□□□□ -0.23
RNF4-206ENST00000504782 TAF10Q12962 218 aa13.62□□□□□ -0.23
RNF4-206ENST00000504782 PSMD2Q13200 908 aa13.62□□□□□ -0.23
RNF4-206ENST00000504782 NCOA4Q13772 614 aa13.62□□□□□ -0.23
RNF4-206ENST00000504782 ZNF699Q32M78 642 aa13.62□□□□□ -0.23
RNF4-206ENST00000504782 PRR23BQ6ZRT6 265 aa13.62□□□□□ -0.23
RNF4-206ENST00000504782 SLC9A9Q8IVB4 645 aa13.62□□□□□ -0.23
RNF4-206ENST00000504782 FSIP1Q8NA03 581 aa13.62□□□□□ -0.23
RNF4-206ENST00000504782 SYAP1Q96A49 352 aaPredicted RBP13.62□□□□□ -0.23
RNF4-206ENST00000504782 C8orf48Q96LL4 319 aa13.62□□□□□ -0.23
RNF4-206ENST00000504782 HMGXB4Q9UGU5 601 aa13.62□□□□□ -0.23
RNF4-206ENST00000504782 FAM237AA0A1B0GTK4 181 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 LEFTY2O00292 366 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 PDXKO00764 312 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 TRIM66O15016 1216 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 RNF40O75150 1001 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 BEST1O76090 585 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 ABL1P00519 1130 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 FAM163BP0C2L3 166 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 PGFP49763 221 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 NOP14P78316 857 aaKnown RBP13.61□□□□□ -0.23
RNF4-206ENST00000504782 SPEM2Q0P670 501 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 GRSF1Q12849 480 aaKnown RBP eCLIP13.61□□□□□ -0.23
RNF4-206ENST00000504782 DPYDQ12882 1025 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 SIM2Q14190 667 aaPredicted RBP13.61□□□□□ -0.23
RNF4-206ENST00000504782 KCNB1Q14721 858 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 PPP2R5DQ14738 602 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 PDGFRLQ15198 375 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 RSPO4Q2I0M5 234 aaPredicted RBP13.61□□□□□ -0.23
RNF4-206ENST00000504782 GAB4Q2WGN9 574 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 ZNF667Q5HYK9 610 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 CEP135Q66GS9 1140 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 ACOT1Q86TX2 421 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 LONP2Q86WA8 852 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 SYNPOQ8N3V7 929 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 SCAMP5Q8TAC9 235 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 P2RY13Q9BPV8 354 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 VRTNQ9H8Y1 702 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 SMPD4Q9NXE4 827 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 TRPM5Q9NZQ8 1165 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 ARHGAP26Q9UNA1 814 aa13.61□□□□□ -0.23
RNF4-206ENST00000504782 CLSTN1O94985 981 aa13.6□□□□□ -0.23
RNF4-206ENST00000504782 OAS1P00973 400 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms