RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 BNC1Q01954 994 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 SSRP1Q08945 709 aaKnown RBP13.54□□□□□ -0.24
LSM6-204ENST00000504181 KCNH2Q12809 1159 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 GALNT17Q6IS24 598 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 PADI6Q6TGC4 694 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 DBX2Q6ZNG2 339 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 PIK3AP1Q6ZUJ8 805 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 TRIM22Q8IYM9 498 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 SPPL2BQ8TCT7 592 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 SPIRE2Q8WWL2 714 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 FOXJ1Q92949 421 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 ZBTB45Q96K62 511 aaPredicted RBP13.54□□□□□ -0.24
LSM6-204ENST00000504181 SENP8Q96LD8 212 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 NAP1L4Q99733 375 aaKnown RBP13.54□□□□□ -0.24
LSM6-204ENST00000504181 MRPL4Q9BYD3 311 aaKnown RBP13.54□□□□□ -0.24
LSM6-204ENST00000504181 TTC12Q9H892 705 aaPredicted RBP13.54□□□□□ -0.24
LSM6-204ENST00000504181 IL17BQ9UHF5 180 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 FARP1Q9Y4F1 1045 aaPredicted RBP13.54□□□□□ -0.24
LSM6-204ENST00000504181 PCDHGB2Q9Y5G2 931 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 PLXNA2O75051 1894 aa13.54□□□□□ -0.24
LSM6-204ENST00000504181 ARHGEF35A5YM69 484 aa13.53□□□□□ -0.24
LSM6-204ENST00000504181 C2orf78A6NCI8 922 aa13.53□□□□□ -0.24
LSM6-204ENST00000504181 BTBD18B2RXH4 712 aa13.53□□□□□ -0.24
LSM6-204ENST00000504181 ABLIM1O14639 778 aa13.53□□□□□ -0.24
LSM6-204ENST00000504181 CXCL8P10145 99 aa13.53□□□□□ -0.24
LSM6-204ENST00000504181 CYP11B2P19099 503 aa13.53□□□□□ -0.24
LSM6-204ENST00000504181 PROZP22891 400 aa13.53□□□□□ -0.24
LSM6-204ENST00000504181 NUMA1Q14980 2115 aa13.53□□□□□ -0.24
LSM6-204ENST00000504181 ARHGAP40Q5TG30 622 aa13.53□□□□□ -0.24
LSM6-204ENST00000504181 MPZL3Q6UWV2 235 aa13.53□□□□□ -0.24
LSM6-204ENST00000504181 FILIP1Q7Z7B0 1213 aa13.53□□□□□ -0.24
LSM6-204ENST00000504181 LRRTM3Q86VH5 581 aa13.53□□□□□ -0.24
LSM6-204ENST00000504181 ZNF513Q8N8E2 541 aaPredicted RBP13.53□□□□□ -0.24
LSM6-204ENST00000504181 LRRC15Q8TF66 581 aa13.53□□□□□ -0.24
LSM6-204ENST00000504181 FGF11Q92914 225 aa13.53□□□□□ -0.24
LSM6-204ENST00000504181 SLC6A17Q9H1V8 727 aa13.53□□□□□ -0.24
LSM6-204ENST00000504181 CPNE5Q9HCH3 593 aa13.53□□□□□ -0.24
LSM6-204ENST00000504181 GMIPQ9P107 970 aa13.53□□□□□ -0.24
LSM6-204ENST00000504181 AHCTF1Q8WYP5 2266 aa13.52□□□□□ -0.24
LSM6-204ENST00000504181 SCAMP3O14828 347 aaKnown RBP13.52□□□□□ -0.25
LSM6-204ENST00000504181 DEXIO95424 95 aa13.52□□□□□ -0.25
LSM6-204ENST00000504181 SPATA31C1P0DKV0 1188 aa13.52□□□□□ -0.25
LSM6-204ENST00000504181 GRIA2P42262 883 aa13.52□□□□□ -0.25
LSM6-204ENST00000504181 TXKP42681 527 aa13.52□□□□□ -0.25
LSM6-204ENST00000504181 TNFRSF4P43489 277 aa13.52□□□□□ -0.25
LSM6-204ENST00000504181 KCNB1Q14721 858 aa13.52□□□□□ -0.25
LSM6-204ENST00000504181 SUZ12Q15022 739 aaKnown RBP13.52□□□□□ -0.25
LSM6-204ENST00000504181 DHCR24Q15392 516 aa13.52□□□□□ -0.25
LSM6-204ENST00000504181 IL27RAQ6UWB1 636 aa13.52□□□□□ -0.25
LSM6-204ENST00000504181 TAS1R3Q7RTX0 852 aa13.52□□□□□ -0.25
LSM6-204ENST00000504181 C2orf15Q8WU43 125 aaKnown RBP13.52□□□□□ -0.25
LSM6-204ENST00000504181 TMEM176AQ96HP8 235 aa13.52□□□□□ -0.25
LSM6-204ENST00000504181 LGMNQ99538 433 aa13.52□□□□□ -0.25
LSM6-204ENST00000504181 GCNT4Q9P109 453 aa13.52□□□□□ -0.25
LSM6-204ENST00000504181 UXTQ9UBK9 157 aaPredicted RBP13.52□□□□□ -0.25
LSM6-204ENST00000504181 A0A0A0MRY4 1105 aa13.51□□□□□ -0.25
LSM6-204ENST00000504181 A0A1W2PQF6 199 aa13.51□□□□□ -0.25
LSM6-204ENST00000504181 FAM205CA6NFA0 338 aa13.51□□□□□ -0.25
LSM6-204ENST00000504181 CCDC169A6NNP5 214 aa13.51□□□□□ -0.25
LSM6-204ENST00000504181 ZBTB24O43167 697 aaPredicted RBP13.51□□□□□ -0.25
LSM6-204ENST00000504181 BRINP1O60477 761 aa13.51□□□□□ -0.25
LSM6-204ENST00000504181 PRPF40AO75400 957 aaKnown RBP13.51□□□□□ -0.25
LSM6-204ENST00000504181 MED24O75448 989 aa13.51□□□□□ -0.25
LSM6-204ENST00000504181 TCF3P15923 654 aa13.51□□□□□ -0.25
LSM6-204ENST00000504181 EIF2DP41214 584 aaKnown RBP13.51□□□□□ -0.25
LSM6-204ENST00000504181 TNFSF9P41273 254 aa13.51□□□□□ -0.25
LSM6-204ENST00000504181 LILRA4P59901 499 aa13.51□□□□□ -0.25
LSM6-204ENST00000504181 ZXDBP98169 803 aa13.51□□□□□ -0.25
LSM6-204ENST00000504181 ATP2C1P98194 919 aaPredicted RBP13.51□□□□□ -0.25
LSM6-204ENST00000504181 TARDBPQ13148 414 aaKnown RBP eCLIP13.51□□□□□ -0.25
LSM6-204ENST00000504181 RTP5Q14D33 572 aa13.51□□□□□ -0.25
LSM6-204ENST00000504181 CALCRLQ16602 461 aa13.51□□□□□ -0.25
LSM6-204ENST00000504181 PKDCCQ504Y2 493 aa13.51□□□□□ -0.25
LSM6-204ENST00000504181 EARS2Q5JPH6 523 aaKnown RBP13.51□□□□□ -0.25
LSM6-204ENST00000504181 TRMT11Q7Z4G4 463 aaKnown RBP13.51□□□□□ -0.25
LSM6-204ENST00000504181 CATSPER3Q86XQ3 398 aa13.51□□□□□ -0.25
LSM6-204ENST00000504181 DNASE2BQ8WZ79 361 aa13.51□□□□□ -0.25
LSM6-204ENST00000504181 NAF1Q96HR8 494 aaKnown RBP13.51□□□□□ -0.25
LSM6-204ENST00000504181 DRC1Q96MC2 740 aa13.51□□□□□ -0.25
LSM6-204ENST00000504181 UBQLN1Q9UMX0 589 aaKnown RBP13.51□□□□□ -0.25
LSM6-204ENST00000504181 ARHGAP26Q9UNA1 814 aa13.51□□□□□ -0.25
LSM6-204ENST00000504181 RELNP78509 3460 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 A0A1B0GVT2 93 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 LEFTY2O00292 366 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 CYP11A1P05108 521 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 HMGB1P09429 215 aaKnown RBP13.5□□□□□ -0.25
LSM6-204ENST00000504181 NCAM1P13591 858 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 HDCP19113 662 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 CYP3A5P20815 502 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 ADSSP30520 456 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 GRK6P43250 576 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 TMPRSS3P57727 454 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 KRT32Q14532 448 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 NOLC1Q14978 699 aaKnown RBP eCLIP13.5□□□□□ -0.25
LSM6-204ENST00000504181 ZBTB6Q15916 424 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 DDR2Q16832 855 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 KIAA1324Q6UXG2 1013 aaKnown RBP13.5□□□□□ -0.25
LSM6-204ENST00000504181 MIB1Q86YT6 1006 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 ADGRG2Q8IZP9 1017 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 PHTF2Q8N3S3 785 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms