RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 CNTFP26441 200 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 GCAP28676 217 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 RPL22P35268 128 aaKnown RBP4.07□□□□□ -1.76
ALYREF-201ENST00000504015 GJC1P36383 396 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 GRM5P41594 1212 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 MSH2P43246 934 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 GPD2P43304 727 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 MAGEA6P43360 314 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 NR2C2P49116 596 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 CTCFP49711 727 aaPredicted RBP4.07□□□□□ -1.76
ALYREF-201ENST00000504015 VPS41P49754 854 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 APLP1P51693 650 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 HIRAP54198 1017 aaPredicted RBP4.07□□□□□ -1.76
ALYREF-201ENST00000504015 WDR4P57081 412 aaKnown RBP4.07□□□□□ -1.76
ALYREF-201ENST00000504015 EIF3EP60228 445 aaKnown RBP4.07□□□□□ -1.76
ALYREF-201ENST00000504015 CDK16Q00536 496 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 OTUD4Q01804 1114 aaKnown RBP4.07□□□□□ -1.76
ALYREF-201ENST00000504015 OGDHQ02218 1023 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 CDK18Q07002 472 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 FSTL1Q12841 308 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 PDIA2Q13087 525 aaKnown RBP4.07□□□□□ -1.76
ALYREF-201ENST00000504015 DNAJC3Q13217 504 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 MPP2Q14168 576 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 DPYSL3Q14195 570 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 TMEM132DQ14C87 1099 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 LRRC14Q15048 493 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 NOMO1Q15155 1222 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 TMED2Q15363 201 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 TRIP13Q15645 432 aaPredicted RBP4.07□□□□□ -1.76
ALYREF-201ENST00000504015 SEPT7Q16181 437 aaKnown RBP4.07□□□□□ -1.76
ALYREF-201ENST00000504015 PKN2Q16513 984 aaKnown RBP4.07□□□□□ -1.76
ALYREF-201ENST00000504015 DBN1Q16643 649 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 LY6KQ17RY6 165 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 TMEM132AQ24JP5 1023 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 DCAF4L1Q3SXM0 396 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 PREPLQ4J6C6 727 aaPredicted RBP4.07□□□□□ -1.76
ALYREF-201ENST00000504015 PTPN20Q4JDL3 420 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 ATP13A4Q4VNC1 1196 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 CCDC38Q502W7 563 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 SEZ6Q53EL9 994 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 ZNF394Q53GI3 561 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 C2CD6Q53TS8 623 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 HHATQ5VTY9 493 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 FYB2Q5VWT5 728 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 LLGL2Q6P1M3 1020 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 GADL1Q6ZQY3 521 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 C3orf62Q6ZUJ4 267 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 ASRGL1Q7L266 308 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 PHLDB2Q86SQ0 1253 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 UNC93AQ86WB7 457 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 RFX6Q8HWS3 928 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 PSTKQ8IV42 348 aaKnown RBP4.07□□□□□ -1.76
ALYREF-201ENST00000504015 TRIM42Q8IWZ5 723 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 ZBED8Q8IZ13 594 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 CYP4X1Q8N118 509 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 AGGF1Q8N302 714 aaeCLIP4.07□□□□□ -1.76
ALYREF-201ENST00000504015 LRRC52Q8N7C0 313 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 LINC01465Q8N7H1 131 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 ANKRD42Q8N9B4 389 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 C1orf127Q8N9H9 656 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 PPTC7Q8NI37 304 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 CXorf38Q8TB03 319 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 RAB3IL1Q8TBN0 382 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 SPATA18Q8TC71 538 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 TRPM4Q8TD43 1214 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 LRRC8CQ8TDW0 803 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 CPT1BQ92523 772 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 KLHL29Q96CT2 875 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 MTBPQ96DY7 904 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 HPDLQ96IR7 371 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 FGD4Q96M96 766 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 NLRP4Q96MN2 994 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 ACAP3Q96P50 834 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 RNF157Q96PX1 679 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 LRRC37BQ96QE4 947 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 SGIP1Q9BQI5 828 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 FERMT1Q9BQL6 677 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 ADPGKQ9BRR6 497 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 TMEM121Q9BTD3 319 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 NT5C1AQ9BXI3 368 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 GCOM2Q9BZD3 368 aaPredicted RBP4.07□□□□□ -1.76
ALYREF-201ENST00000504015 FHDC1Q9C0D6 1143 aaPredicted RBP4.07□□□□□ -1.76
ALYREF-201ENST00000504015 VPS37BQ9H9H4 285 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 GBA2Q9HCG7 927 aaPredicted RBP4.07□□□□□ -1.76
ALYREF-201ENST00000504015 IGSF5Q9NSI5 407 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 FGFR1OP2Q9NVK5 253 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 DPP3Q9NY33 737 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 RBPJLQ9UBG7 517 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 NXF1Q9UBU9 619 aaKnown RBP4.07□□□□□ -1.76
ALYREF-201ENST00000504015 TBK1Q9UHD2 729 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 GTF2IRD1Q9UHL9 959 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 SIX4Q9UIU6 781 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 ZNF180Q9UJW8 692 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 USP18Q9UMW8 372 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 SLC45A1Q9Y2W3 748 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.07□□□□□ -1.76
ALYREF-201ENST00000504015 IKBKGQ9Y6K9 419 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 OTOFQ9HC10 1997 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 RALGAPA2Q2PPJ7 1873 aa4.07□□□□□ -1.76
ALYREF-201ENST00000504015 RRN3P2A6NIE6 340 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms