RNA–Protein interactions for RNA: ENST00000503255.5

GYPB-203, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-203ENST00000503255 FOXP1Q9H334 677 aaPredicted RBP4.41□□□□□ -1.7
GYPB-203ENST00000503255 HOMER2Q9NSB8 354 aa4.41□□□□□ -1.7
GYPB-203ENST00000503255 LPAR3Q9UBY5 353 aa4.41□□□□□ -1.7
GYPB-203ENST00000503255 GRPP07492 148 aa4.4□□□□□ -1.71
GYPB-203ENST00000503255 KCNJ5P48544 419 aa4.4□□□□□ -1.71
GYPB-203ENST00000503255 TPTEP56180 551 aa4.4□□□□□ -1.71
GYPB-203ENST00000503255 SOX8P57073 446 aa4.4□□□□□ -1.71
GYPB-203ENST00000503255 E2F1Q01094 437 aa4.4□□□□□ -1.71
GYPB-203ENST00000503255 PLS1Q14651 629 aa4.4□□□□□ -1.71
GYPB-203ENST00000503255 CYP1B1Q16678 543 aa4.4□□□□□ -1.71
GYPB-203ENST00000503255 ZIK1Q3SY52 487 aaPredicted RBP4.4□□□□□ -1.71
GYPB-203ENST00000503255 CERKLQ49MI3 558 aaPredicted RBP4.4□□□□□ -1.71
GYPB-203ENST00000503255 AMOTQ4VCS5 1084 aa4.4□□□□□ -1.71
GYPB-203ENST00000503255 MIDNQ504T8 468 aa4.4□□□□□ -1.71
GYPB-203ENST00000503255 CATIPQ7Z7H3 387 aa4.4□□□□□ -1.71
GYPB-203ENST00000503255 MRPL10Q7Z7H8 261 aaKnown RBP4.4□□□□□ -1.71
GYPB-203ENST00000503255 PRR18Q8N4B5 295 aa4.4□□□□□ -1.71
GYPB-203ENST00000503255 PRPF38AQ8NAV1 312 aaKnown RBP4.4□□□□□ -1.71
GYPB-203ENST00000503255 ACRBPQ8NEB7 543 aa4.4□□□□□ -1.71
GYPB-203ENST00000503255 VCPIP1Q96JH7 1222 aa4.4□□□□□ -1.71
GYPB-203ENST00000503255 FAM118BQ9BPY3 351 aa4.4□□□□□ -1.71
GYPB-203ENST00000503255 CXorf36Q9H7Y0 433 aa4.4□□□□□ -1.71
GYPB-203ENST00000503255 TMEM184CQ9NVA4 438 aa4.4□□□□□ -1.71
GYPB-203ENST00000503255 ASIC5Q9NY37 505 aa4.4□□□□□ -1.71
GYPB-203ENST00000503255 XPR1Q9UBH6 696 aa4.4□□□□□ -1.71
GYPB-203ENST00000503255 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.4□□□□□ -1.716e-10■■■■■ 33.8
GYPB-203ENST00000503255 LY6G6EA0A0G2JKS1 128 aa4.39□□□□□ -1.71
GYPB-203ENST00000503255 CD8B2A6NJW9 211 aa4.39□□□□□ -1.71
GYPB-203ENST00000503255 DSCR3O14972 297 aa4.39□□□□□ -1.71
GYPB-203ENST00000503255 ABLIM3O94929 683 aa4.39□□□□□ -1.71
GYPB-203ENST00000503255 CCND1P24385 295 aa4.39□□□□□ -1.71
GYPB-203ENST00000503255 PSG6Q00889 435 aa4.39□□□□□ -1.71
GYPB-203ENST00000503255 MYO1EQ12965 1108 aa4.39□□□□□ -1.71
GYPB-203ENST00000503255 FAM187BQ17R55 369 aa4.39□□□□□ -1.71
GYPB-203ENST00000503255 LEXMQ3ZCV2 418 aa4.39□□□□□ -1.71
GYPB-203ENST00000503255 CCDC157Q569K6 752 aa4.39□□□□□ -1.71
GYPB-203ENST00000503255 MEX3CQ5U5Q3 659 aaKnown RBP4.39□□□□□ -1.71
GYPB-203ENST00000503255 KIAA1161Q6NSJ0 714 aa4.39□□□□□ -1.71
GYPB-203ENST00000503255 BCDIN3DQ7Z5W3 292 aaKnown RBP4.39□□□□□ -1.71
GYPB-203ENST00000503255 CAND1Q86VP6 1230 aaKnown RBP4.39□□□□□ -1.71
GYPB-203ENST00000503255 GABRQQ9UN88 632 aa4.39□□□□□ -1.71
GYPB-203ENST00000503255 SLC16A6O15403 523 aa4.38□□□□□ -1.71
GYPB-203ENST00000503255 TJP3O95049 919 aa4.38□□□□□ -1.71
GYPB-203ENST00000503255 CHRM5P08912 532 aaPredicted RBP4.38□□□□□ -1.71
GYPB-203ENST00000503255 HMGB1P09429 215 aaKnown RBP4.38□□□□□ -1.71
GYPB-203ENST00000503255 SCP2P22307 547 aa4.38□□□□□ -1.71
GYPB-203ENST00000503255 UCP3P55916 312 aa4.38□□□□□ -1.71
GYPB-203ENST00000503255 NANOS2P60321 138 aaKnown RBP4.38□□□□□ -1.71
GYPB-203ENST00000503255 KRT85P78386 507 aa4.38□□□□□ -1.71
GYPB-203ENST00000503255 GHRHRQ02643 423 aa4.38□□□□□ -1.71
GYPB-203ENST00000503255 ZNF91Q05481 1191 aa4.38□□□□□ -1.71
GYPB-203ENST00000503255 GTF2H3Q13889 308 aa4.38□□□□□ -1.71
GYPB-203ENST00000503255 KHDC1LQ5JSQ8 128 aa4.38□□□□□ -1.71
GYPB-203ENST00000503255 C10orf25Q5T742 122 aa4.38□□□□□ -1.71
GYPB-203ENST00000503255 THEMIS2Q5TEJ8 643 aa4.38□□□□□ -1.71
GYPB-203ENST00000503255 USP45Q70EL2 814 aa4.38□□□□□ -1.71
GYPB-203ENST00000503255 OSCP1Q8WVF1 389 aa4.38□□□□□ -1.71
GYPB-203ENST00000503255 SOCS4Q8WXH5 440 aa4.38□□□□□ -1.71
GYPB-203ENST00000503255 PRR25Q96S07 402 aa4.38□□□□□ -1.71
GYPB-203ENST00000503255 ARMT1Q9H993 441 aa4.38□□□□□ -1.71
GYPB-203ENST00000503255 SNX14Q9Y5W7 946 aa4.38□□□□□ -1.71
GYPB-203ENST00000503255 UBE2Q2LH0YL09 131 aa4.37□□□□□ -1.71
GYPB-203ENST00000503255 PPM1GO15355 546 aaPredicted RBP4.37□□□□□ -1.71
GYPB-203ENST00000503255 USP1O94782 785 aa4.37□□□□□ -1.71
GYPB-203ENST00000503255 A1BGP04217 495 aa4.37□□□□□ -1.71
GYPB-203ENST00000503255 NKX6-1P78426 367 aaPredicted RBP4.37□□□□□ -1.71
GYPB-203ENST00000503255 ZNF813Q6ZN06 617 aa4.37□□□□□ -1.71
GYPB-203ENST00000503255 ABRAQ8N0Z2 381 aa4.37□□□□□ -1.71
GYPB-203ENST00000503255 ZNF548Q8NEK5 533 aaPredicted RBP4.37□□□□□ -1.71
GYPB-203ENST00000503255 ADAMTS18Q8TE60 1221 aa4.37□□□□□ -1.71
GYPB-203ENST00000503255 PIGOQ8TEQ8 1089 aa4.37□□□□□ -1.71
GYPB-203ENST00000503255 TMEM171Q8WVE6 324 aa4.37□□□□□ -1.71
GYPB-203ENST00000503255 SLC35A4Q96G79 324 aa4.37□□□□□ -1.71
GYPB-203ENST00000503255 CCDC17Q96LX7 622 aa4.37□□□□□ -1.71
GYPB-203ENST00000503255 PUS7Q96PZ0 661 aaKnown RBP4.37□□□□□ -1.71
GYPB-203ENST00000503255 SMAD5Q99717 465 aaKnown RBP4.37□□□□□ -1.71
GYPB-203ENST00000503255 CPA4Q9UI42 421 aa4.37□□□□□ -1.71
GYPB-203ENST00000503255 PLEKHM1Q9Y4G2 1056 aa4.37□□□□□ -1.71
GYPB-203ENST00000503255 CYSRT1A8MQ03 144 aa4.36□□□□□ -1.71
GYPB-203ENST00000503255 PRR23D1E9PI22 279 aaPredicted RBP4.36□□□□□ -1.71
GYPB-203ENST00000503255 GCATO75600 419 aa4.36□□□□□ -1.71
GYPB-203ENST00000503255 POU2F2P09086 479 aa4.36□□□□□ -1.71
GYPB-203ENST00000503255 TMEM191BP0C7N4 346 aa4.36□□□□□ -1.71
GYPB-203ENST00000503255 PRR23D2P0DMB1 279 aaPredicted RBP4.36□□□□□ -1.71
GYPB-203ENST00000503255 PDE6CP51160 858 aa4.36□□□□□ -1.71
GYPB-203ENST00000503255 SEC23BQ15437 767 aa4.36□□□□□ -1.71
GYPB-203ENST00000503255 PTCHD3Q3KNS1 767 aa4.36□□□□□ -1.71
GYPB-203ENST00000503255 IZUMO1Q8IYV9 350 aa4.36□□□□□ -1.71
GYPB-203ENST00000503255 SPATA3Q8NHX4 192 aa4.36□□□□□ -1.71
GYPB-203ENST00000503255 MARK4Q96L34 752 aa4.36□□□□□ -1.71
GYPB-203ENST00000503255 CAMK1GQ96NX5 476 aa4.36□□□□□ -1.71
GYPB-203ENST00000503255 WWOXQ9NZC7 414 aa4.36□□□□□ -1.71
GYPB-203ENST00000503255 TFCP2L1Q9NZI6 479 aa4.36□□□□□ -1.71
GYPB-203ENST00000503255 SPEF1Q9Y4P9 236 aa4.36□□□□□ -1.71
GYPB-203ENST00000503255 H3BNX3 289 aa4.35□□□□□ -1.71
GYPB-203ENST00000503255 CES2O00748 559 aa4.35□□□□□ -1.71
GYPB-203ENST00000503255 CRYABP02511 175 aaKnown RBP4.35□□□□□ -1.71
GYPB-203ENST00000503255 FGAP02671 866 aa4.35□□□□□ -1.71
GYPB-203ENST00000503255 DLDP09622 509 aaKnown RBP4.35□□□□□ -1.71
GYPB-203ENST00000503255 THBS3P49746 956 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms