RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ARFGAP1Q8N6T3 406 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 SPATA18Q8TC71 538 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 RNF25Q96BH1 459 aaPredicted RBP23.13■■□□□ 1.29
PTPN13-205ENST00000502971 HSFY1Q96LI6 401 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 GDAP1L1Q96MZ0 367 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 HERPUD2Q9BSE4 406 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 CNPY3Q9BT09 278 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 CRISPLD2Q9H0B8 497 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 HPCAL4Q9UM19 191 aa23.13■■□□□ 1.29
PTPN13-205ENST00000502971 CASTOR2A6NHX0 329 aa23.12■■□□□ 1.29
PTPN13-205ENST00000502971 PCK1P35558 622 aa23.12■■□□□ 1.29
PTPN13-205ENST00000502971 CDK7P50613 346 aa23.12■■□□□ 1.29
PTPN13-205ENST00000502971 HLTFQ14527 1009 aaKnown RBP eCLIP23.12■■□□□ 1.29
PTPN13-205ENST00000502971 MBTPS1Q14703 1052 aa23.12■■□□□ 1.29
PTPN13-205ENST00000502971 TRIM51Q9BSJ1 452 aa23.12■■□□□ 1.29
PTPN13-205ENST00000502971 DCLK3Q9C098 648 aa23.12■■□□□ 1.29
PTPN13-205ENST00000502971 DDX43Q9NXZ2 648 aaKnown RBP23.12■■□□□ 1.29
PTPN13-205ENST00000502971 CACNG4Q9UBN1 327 aa23.12■■□□□ 1.29
PTPN13-205ENST00000502971 BRCA2P51587 3418 aa23.12■■□□□ 1.29
PTPN13-205ENST00000502971 C9IYK1 514 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 PIK3R2O00459 728 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 DPYSL4O14531 572 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 DAPK3O43293 454 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 POMCP01189 267 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 PDGFRAP16234 1089 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 ECHS1P30084 290 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 GBP1P32455 592 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 SLC8A3P57103 927 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 TUSC3Q13454 348 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 SPOCD1Q6ZMY3 1216 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 SLC24A5Q71RS6 500 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 C3orf58Q8NDZ4 430 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 RXFP2Q8WXD0 754 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 HEMGNQ9BXL5 484 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 FTHL17Q9BXU8 183 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 FEZ2Q9UHY8 353 aaPredicted RBP23.11■■□□□ 1.29
PTPN13-205ENST00000502971 XPO1O14980 1071 aaKnown RBP23.11■■□□□ 1.29
PTPN13-205ENST00000502971 PAPSS1O43252 624 aaPredicted RBP23.11■■□□□ 1.29
PTPN13-205ENST00000502971 TJP3O95049 919 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 MYCP01106 439 aaPredicted RBP23.11■■□□□ 1.29
PTPN13-205ENST00000502971 IGFBP6P24592 240 aaPredicted RBP23.11■■□□□ 1.29
PTPN13-205ENST00000502971 LLGL1Q15334 1064 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 TXNRD3NBQ6F5E7 133 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 FAM43BQ6ZT52 329 aaPredicted RBP23.11■■□□□ 1.29
PTPN13-205ENST00000502971 SYDE1Q6ZW31 735 aaPredicted RBP23.11■■□□□ 1.29
PTPN13-205ENST00000502971 DDX42Q86XP3 938 aaKnown RBP eCLIP23.11■■□□□ 1.29
PTPN13-205ENST00000502971 MREGQ8N565 214 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 C1orf54Q8WWF1 131 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 DUSP16Q9BY84 665 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 KLHL11Q9NVR0 708 aa23.11■■□□□ 1.29
PTPN13-205ENST00000502971 GABBR2O75899 941 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 ECEL1O95672 775 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 FAM153BP0C7A2 387 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 SELPP16109 830 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 DESP17661 470 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 FAM189BP81408 668 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 CBX1P83916 185 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 BFSP2Q13515 415 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 CCNG2Q16589 344 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 FAM153CQ494X1 144 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 MFSD7Q6UXD7 560 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 LRRC8DQ7L1W4 858 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 ARCQ7LC44 396 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 RTN4RL1Q86UN2 441 aaPredicted RBP23.1■■□□□ 1.29
PTPN13-205ENST00000502971 SCUBE3Q8IX30 993 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 FUKQ8N0W3 1084 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 GRK7Q8WTQ7 553 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 RAPGEF5Q92565 580 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 PIWIL1Q96J94 861 aaKnown RBP23.1■■□□□ 1.29
PTPN13-205ENST00000502971 NCAPGQ9BPX3 1015 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 DPH5Q9H2P9 285 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 FAM153AQ9UHL3 310 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 EFR3BQ9Y2G0 817 aa23.1■■□□□ 1.29
PTPN13-205ENST00000502971 PI4K2BG5E9Z4 385 aa23.09■■□□□ 1.29
PTPN13-205ENST00000502971 ATP2C2O75185 946 aa23.09■■□□□ 1.29
PTPN13-205ENST00000502971 ODC1P11926 461 aa23.09■■□□□ 1.29
PTPN13-205ENST00000502971 ACAT1P24752 427 aaKnown RBP23.09■■□□□ 1.29
PTPN13-205ENST00000502971 TKTP29401 623 aaKnown RBP23.09■■□□□ 1.29
PTPN13-205ENST00000502971 MIPP30301 263 aa23.09■■□□□ 1.29
PTPN13-205ENST00000502971 PLCB3Q01970 1234 aa23.09■■□□□ 1.29
PTPN13-205ENST00000502971 TIGD5Q53EQ6 642 aa23.09■■□□□ 1.29
PTPN13-205ENST00000502971 TFDP3Q5H9I0 405 aa23.09■■□□□ 1.29
PTPN13-205ENST00000502971 ANKS1BQ7Z6G8 1248 aa23.09■■□□□ 1.29
PTPN13-205ENST00000502971 KHSRPQ92945 711 aaKnown RBP eCLIP23.09■■□□□ 1.29
PTPN13-205ENST00000502971 PAAF1Q9BRP4 392 aa23.09■■□□□ 1.29
PTPN13-205ENST00000502971 ZWILCHQ9H900 591 aa23.09■■□□□ 1.29
PTPN13-205ENST00000502971 CHST7Q9NS84 486 aa23.09■■□□□ 1.29
PTPN13-205ENST00000502971 CDH9Q9ULB4 789 aa23.09■■□□□ 1.29
PTPN13-205ENST00000502971 INPP5FQ9Y2H2 1132 aa23.09■■□□□ 1.29
PTPN13-205ENST00000502971 hCG_1818297A0A087WSY0 165 aa23.08■■□□□ 1.29
PTPN13-205ENST00000502971 LRRD1A4D1F6 860 aa23.08■■□□□ 1.29
PTPN13-205ENST00000502971 TRUB2O95900 331 aaKnown RBP23.08■■□□□ 1.29
PTPN13-205ENST00000502971 IBSPP21815 317 aaPredicted RBP23.08■■□□□ 1.29
PTPN13-205ENST00000502971 IL1R2P27930 398 aa23.08■■□□□ 1.29
PTPN13-205ENST00000502971 FLT3P36888 993 aa23.08■■□□□ 1.29
PTPN13-205ENST00000502971 CDKN2BP42772 138 aa23.08■■□□□ 1.29
PTPN13-205ENST00000502971 GJA8P48165 433 aa23.08■■□□□ 1.29
PTPN13-205ENST00000502971 TRNP1Q6NT89 227 aa23.08■■□□□ 1.29
PTPN13-205ENST00000502971 FAM126BQ8IXS8 530 aa23.08■■□□□ 1.29
PTPN13-205ENST00000502971 ANKLE1Q8NAG6 615 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms