RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 LPCAT2Q7L5N7 544 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 ZNF786Q8N393 782 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 NSUN6Q8TEA1 469 aaKnown RBP17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 SORCS3Q9UPU3 1222 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 ACVR2BQ13705 512 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 SLC15A2Q16348 729 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 ACSF2Q96CM8 615 aaPredicted RBP17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 MXRA8Q9BRK3 442 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 APOA4P06727 396 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 C2CD6Q53TS8 623 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 PDPK2PQ6A1A2 396 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 C17orf75Q9HAS0 396 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 ZNF302Q9NR11 478 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 ANKEF1Q9NU02 776 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 THAP1Q9NVV9 213 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 ATXN10Q9UBB4 475 aa17.88■□□□□ 0.45
HMGXB3-201ENST00000502717 EFNA5P52803 228 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 COG2Q14746 738 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 BBS5Q8N3I7 341 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 PSPC1Q8WXF1 523 aaKnown RBP17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 RAVER2Q9HCJ3 691 aaKnown RBP17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 STAP1Q9ULZ2 295 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 H2AFYO75367 372 aaKnown RBP17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 RAG1P15918 1043 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 SSTR1P30872 391 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 CHN2P52757 468 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 SLC12A3P55017 1021 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 TAF1CQ15572 869 aaPredicted RBP17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 FESP07332 822 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 VEGFAP15692 232 aaPredicted RBP17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 ZNF157P51786 506 aaPredicted RBP17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 ZFP1Q6P2D0 407 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 CCNJLQ8IV13 435 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 CROCCP3Q8IVE0 287 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 ARHGEF19Q8IW93 802 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 WDR60Q8WVS4 1066 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 SRPK1Q96SB4 655 aaKnown RBP17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 NRDE2Q9H7Z3 1164 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 TAS2R14Q9NYV8 317 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 APPL1Q9UKG1 709 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 ATP11BQ9Y2G3 1177 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 IGSF9BQ9UPX0 1349 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 CIITAP33076 1130 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 ADCK1Q86TW2 530 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 NCLNQ969V3 563 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 NDNQ99608 321 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 ECSITQ9BQ95 431 aa17.87■□□□□ 0.45
HMGXB3-201ENST00000502717 ATP9BO43861 1147 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 ANPEPP15144 967 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 PMLP29590 882 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 MON2Q7Z3U7 1717 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 TRPC5OSA6NMA1 111 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 ABCE1P61221 599 aaKnown RBP17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 WDR72Q3MJ13 1102 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 KBTBD12Q3ZCT8 623 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 ACTL9Q8TC94 416 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 TAS1R2Q8TE23 839 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 VCPIP1Q96JH7 1222 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 POP1Q99575 1024 aaKnown RBP17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 EBF2Q9HAK2 575 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 TNS2Q63HR2 1409 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 SERPINB5P36952 375 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 USP10Q14694 798 aaKnown RBP17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 EFHC2Q5JST6 749 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 USP6NLQ92738 828 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 NIF3L1Q9GZT8 377 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 SLCO1B3Q9NPD5 702 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 NSMCE4AQ9NXX6 385 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 C3P01024 1663 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 CACNA1FO60840 1977 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 ZBTB39O15060 712 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 ENTPD3O75355 529 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 KRT8P05787 483 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 RALBP11234 206 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 HMOX2P30519 316 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 C1QBPQ07021 282 aaKnown RBP17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 CBWD6Q4V339 395 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 CBWD3Q5JTY5 395 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 CBWD5Q5RIA9 395 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 ECHDC2Q86YB7 292 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 OTUD5Q96G74 571 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 CNDP1Q96KN2 507 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 FSD1LQ9BXM9 530 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 ZNF518BQ9C0D4 1074 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 ITGB1BP2Q9UKP3 347 aa17.86■□□□□ 0.45
HMGXB3-201ENST00000502717 TYW5A2RUC4 315 aaKnown RBP17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 CHKAP35790 457 aa17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 STILQ15468 1287 aa17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 CDC42EP5Q6NZY7 148 aa17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 NOP9Q86U38 636 aaKnown RBP17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 METTL23Q86XA0 190 aa17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 LRRC57Q8N9N7 239 aa17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 ZNF555Q8NEP9 628 aa17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 MTFR1LQ9H019 292 aa17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 ARHGEF3Q9NR81 526 aa17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 VCAM1P19320 739 aa17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 SP100P23497 879 aaPredicted RBP17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 KLRK1P26718 216 aa17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 RPL5P46777 297 aaKnown RBP17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 BOLA3Q53S33 107 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms