RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 SATB1Q01826 763 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 ICA1Q05084 483 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 GRM1Q13255 1194 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 E2F2Q14209 437 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 SF3B3Q15393 1217 aaKnown RBP7.43□□□□□ -1.22
NEDD4-203ENST00000502612 CCDC38Q502W7 563 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 DEPDC1Q5TB30 811 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 PGBD2Q6P3X8 592 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 SPRED1Q7Z699 444 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 CCDC28AQ8IWP9 274 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 SLC15A3Q8IY34 581 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 COLGALT2Q8IYK4 626 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 MYCT1Q8N699 235 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 ATG16L2Q8NAA4 619 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 ATG4AQ8WYN0 398 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 FAM136AQ96C01 138 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 ZBTB45Q96K62 511 aaPredicted RBP7.43□□□□□ -1.22
NEDD4-203ENST00000502612 SNX27Q96L92 541 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 OSBPL9Q96SU4 736 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 MLST8Q9BVC4 326 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 ACTRT3Q9BYD9 372 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 ZMYND8Q9ULU4 1186 aaPredicted RBP7.43□□□□□ -1.22
NEDD4-203ENST00000502612 HPSEQ9Y251 543 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 SNX14Q9Y5W7 946 aa7.43□□□□□ -1.22
NEDD4-203ENST00000502612 PIP5K1BO14986 540 aa7.42□□□□□ -1.22
NEDD4-203ENST00000502612 CD3EAPO15446 510 aaKnown RBP7.42□□□□□ -1.22
NEDD4-203ENST00000502612 KCNQ3O43525 872 aa7.42□□□□□ -1.22
NEDD4-203ENST00000502612 VNN1O95497 513 aa7.42□□□□□ -1.22
NEDD4-203ENST00000502612 RHOP08100 348 aa7.42□□□□□ -1.22
NEDD4-203ENST00000502612 NTSR1P30989 418 aa7.42□□□□□ -1.22
NEDD4-203ENST00000502612 GUCY1B3Q02153 619 aa7.42□□□□□ -1.22
NEDD4-203ENST00000502612 EIF2B5Q13144 721 aaKnown RBP7.42□□□□□ -1.22
NEDD4-203ENST00000502612 BLMHQ13867 455 aa7.42□□□□□ -1.22
NEDD4-203ENST00000502612 PFKFB4Q16877 469 aa7.42□□□□□ -1.22
NEDD4-203ENST00000502612 LY6KQ17RY6 165 aa7.42□□□□□ -1.22
NEDD4-203ENST00000502612 TIGD2Q4W5G0 525 aa7.42□□□□□ -1.22
NEDD4-203ENST00000502612 TMTC4Q5T4D3 741 aa7.42□□□□□ -1.22
NEDD4-203ENST00000502612 MANEALQ5VSG8 457 aa7.42□□□□□ -1.22
NEDD4-203ENST00000502612 ICE2Q659A1 982 aa7.42□□□□□ -1.22
NEDD4-203ENST00000502612 SPARTQ8N0X7 666 aa7.42□□□□□ -1.22
NEDD4-203ENST00000502612 ANKRD42Q8N9B4 389 aa7.42□□□□□ -1.22
NEDD4-203ENST00000502612 MYCBPAPQ8TBZ2 947 aa7.42□□□□□ -1.22
NEDD4-203ENST00000502612 SH3RF3Q8TEJ3 882 aaPredicted RBP7.42□□□□□ -1.22
NEDD4-203ENST00000502612 STYXQ8WUJ0 223 aa7.42□□□□□ -1.22
NEDD4-203ENST00000502612 GRHPRQ9UBQ7 328 aa7.42□□□□□ -1.22
NEDD4-203ENST00000502612 FZD1Q9UP38 647 aa7.42□□□□□ -1.22
NEDD4-203ENST00000502612 BAZ1BQ9UIG0 1483 aaKnown RBP7.42□□□□□ -1.22
NEDD4-203ENST00000502612 ADM5C9JUS6 153 aa7.41□□□□□ -1.22
NEDD4-203ENST00000502612 NPC1O15118 1278 aa7.41□□□□□ -1.22
NEDD4-203ENST00000502612 TNFRSF6BO95407 300 aa7.41□□□□□ -1.22
NEDD4-203ENST00000502612 LMNAP02545 664 aaKnown RBP7.41□□□□□ -1.22
NEDD4-203ENST00000502612 CSTBP04080 98 aaKnown RBP7.41□□□□□ -1.22
NEDD4-203ENST00000502612 ITGAMP11215 1152 aa7.41□□□□□ -1.22
NEDD4-203ENST00000502612 SPATS1Q496A3 300 aa7.41□□□□□ -1.22
NEDD4-203ENST00000502612 FNDC7Q5VTL7 733 aa7.41□□□□□ -1.22
NEDD4-203ENST00000502612 RHOUQ7L0Q8 258 aa7.41□□□□□ -1.22
NEDD4-203ENST00000502612 NKAPQ8N5F7 415 aaKnown RBP7.41□□□□□ -1.22
NEDD4-203ENST00000502612 FUBP1Q96AE4 644 aaKnown RBP7.41□□□□□ -1.22
NEDD4-203ENST00000502612 PTCD3Q96EY7 689 aaKnown RBP7.41□□□□□ -1.22
NEDD4-203ENST00000502612 ZNF503Q96F45 646 aa7.41□□□□□ -1.22
NEDD4-203ENST00000502612 EIF2AQ9BY44 585 aaKnown RBP7.41□□□□□ -1.22
NEDD4-203ENST00000502612 TM7SF3Q9NS93 570 aa7.41□□□□□ -1.22
NEDD4-203ENST00000502612 PCDHGB3Q9Y5G1 929 aa7.41□□□□□ -1.22
NEDD4-203ENST00000502612 HS3ST4Q9Y661 456 aa7.41□□□□□ -1.22
NEDD4-203ENST00000502612 ATAD2BQ9ULI0 1458 aa7.41□□□□□ -1.22
NEDD4-203ENST00000502612 GOLGA6L3A6NEY3 463 aa7.4□□□□□ -1.22
NEDD4-203ENST00000502612 AQP7P3A6NL99 342 aa7.4□□□□□ -1.22
NEDD4-203ENST00000502612 TRIM38O00635 465 aa7.4□□□□□ -1.22
NEDD4-203ENST00000502612 HNRNPDLO14979 420 aaKnown RBP7.4□□□□□ -1.22
NEDD4-203ENST00000502612 SKAP2O75563 359 aaPredicted RBP7.4□□□□□ -1.22
NEDD4-203ENST00000502612 EGR1P18146 543 aa7.4□□□□□ -1.22
NEDD4-203ENST00000502612 MST1P26927 711 aa7.4□□□□□ -1.22
NEDD4-203ENST00000502612 PDE6CP51160 858 aa7.4□□□□□ -1.22
NEDD4-203ENST00000502612 ZACNQ401N2 412 aa7.4□□□□□ -1.22
NEDD4-203ENST00000502612 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.4□□□□□ -1.22
NEDD4-203ENST00000502612 SFRP4Q6FHJ7 346 aaPredicted RBP7.4□□□□□ -1.22
NEDD4-203ENST00000502612 ARMC6Q6NXE6 501 aa7.4□□□□□ -1.22
NEDD4-203ENST00000502612 MAVSQ7Z434 540 aa7.4□□□□□ -1.22
NEDD4-203ENST00000502612 ARHGEF19Q8IW93 802 aa7.4□□□□□ -1.22
NEDD4-203ENST00000502612 B3GALNT2Q8NCR0 500 aa7.4□□□□□ -1.22
NEDD4-203ENST00000502612 SMCR8Q8TEV9 937 aaPredicted RBP7.4□□□□□ -1.22
NEDD4-203ENST00000502612 ZNF384Q8TF68 577 aa7.4□□□□□ -1.22
NEDD4-203ENST00000502612 TRIM5Q9C035 493 aa7.4□□□□□ -1.22
NEDD4-203ENST00000502612 SLC25A32Q9H2D1 315 aa7.4□□□□□ -1.22
NEDD4-203ENST00000502612 LRFN1Q9P244 771 aa7.4□□□□□ -1.22
NEDD4-203ENST00000502612 TESQ9UGI8 421 aaKnown RBP7.4□□□□□ -1.22
NEDD4-203ENST00000502612 SCAF8Q9UPN6 1271 aaKnown RBP7.4□□□□□ -1.22
NEDD4-203ENST00000502612 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.4□□□□□ -1.22
NEDD4-203ENST00000502612 FER1L4A9Z1Z3 1794 aa7.4□□□□□ -1.23
NEDD4-203ENST00000502612 EIF4G1Q04637 1599 aaKnown RBP7.39□□□□□ -1.23
NEDD4-203ENST00000502612 VWC2LB2RUY7 222 aa7.39□□□□□ -1.23
NEDD4-203ENST00000502612 ARP10275 920 aa7.39□□□□□ -1.23
NEDD4-203ENST00000502612 TYRP1P17643 537 aa7.39□□□□□ -1.23
NEDD4-203ENST00000502612 CLCN2P51788 898 aa7.39□□□□□ -1.23
NEDD4-203ENST00000502612 FOXE3Q13461 319 aa7.39□□□□□ -1.23
NEDD4-203ENST00000502612 TUBA3CQ13748 450 aa7.39□□□□□ -1.23
NEDD4-203ENST00000502612 SPARCL1Q14515 664 aa7.39□□□□□ -1.23
NEDD4-203ENST00000502612 LCE4AQ5TA78 99 aa7.39□□□□□ -1.23
NEDD4-203ENST00000502612 FAXCQ5TGI0 409 aa7.39□□□□□ -1.23
NEDD4-203ENST00000502612 TUBA3EQ6PEY2 450 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms