RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 LPIN3Q9BQK8 851 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 DUSP16Q9BY84 665 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 ZNF518BQ9C0D4 1074 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 FBXO44Q9H4M3 255 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 TASP1Q9H6P5 420 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 SIX2Q9NPC8 291 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 SORCS3Q9UPU3 1222 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 DENND4CQ5VZ89 1909 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 DOCK6Q96HP0 2047 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 SLC38A8A6NNN8 435 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 BECN2A8MW95 431 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 O00370 1275 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 ZDHHC11BP0C7U3 371 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 SETSIPP0DME0 302 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 CD58P19256 250 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 SLC9A1P19634 815 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 GABRR2P28476 465 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 COPB1P53618 953 aaKnown RBP11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 BCAT1P54687 386 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 SLC8A3P57103 927 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 KCNMA1Q12791 1236 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 ZNF268Q14587 947 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 CNGA2Q16280 664 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 TAF12Q16514 161 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 PTPN21Q16825 1174 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 DDR2Q16832 855 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 CCDC142Q17RM4 750 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 ARHGAP15Q53QZ3 475 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 SGO2Q562F6 1265 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 RAB41Q5JT25 222 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 PPP1R26Q5T8A7 1209 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 KLHDC7AQ5VTJ3 777 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 TMEM270Q6UE05 265 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 LCLAT1Q6UWP7 414 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 GET4Q7L5D6 327 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 TMEM150AQ86TG1 271 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 RNF135Q8IUD6 432 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 ARHGEF19Q8IW93 802 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 AOPEPQ8N6M6 819 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 C12orf29Q8N999 325 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 ZMIZ2Q8NF64 920 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 ITFG1Q8TB96 612 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 ELSPBP1Q96BH3 223 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 ASB16Q96NS5 453 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 SLITRK1Q96PX8 696 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 SMOQ99835 787 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 NAA15Q9BXJ9 866 aaKnown RBP11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 KIF9Q9HAQ2 790 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 KCNK12Q9HB15 430 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 ZNF334Q9HCZ1 680 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 UBE2TQ9NPD8 197 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 CD320Q9NPF0 282 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 TRPV5Q9NQA5 729 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 KRT82Q9NSB4 513 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 TMEM30AQ9NV96 361 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 USP3Q9Y6I4 520 aa11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 NUP210Q8TEM1 1887 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-212ENST00000502563 BDP1A6H8Y1 2624 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 A0A1W2PQC6 194 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 HHLA1C9JL84 531 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 XPO1O14980 1071 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 DCXO43602 365 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 TADA3O75528 432 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 AP1G2O75843 785 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 SOAT2O75908 522 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 OLFM2O95897 454 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 CCDC130P13994 396 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 UCHL3P15374 230 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 CEBPBP17676 345 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 CDK11BP21127 795 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 GBP2P32456 591 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 SSTR3P32745 418 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 PLA2G4AP47712 749 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 RPL34P49207 117 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 PSEN1P49768 467 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 SLC5A3P53794 718 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 MLLT6P55198 1093 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 BPIFB4P59827 614 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 ZNF445P59923 1031 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 TPM4P67936 248 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 NTHL1P78549 312 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 BST2Q10589 180 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 MTMR3Q13615 1198 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 LRSAM1Q6UWE0 723 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 MON1AQ86VX9 555 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 CREBRFQ8IUR6 639 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 FMNL3Q8IVF7 1028 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 HS6ST3Q8IZP7 471 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 STK32AQ8WU08 396 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 DEPDC1BQ8WUY9 529 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 KCTD13Q8WZ19 329 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 MRPS31Q92665 395 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 SMARCD2Q92925 531 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 ELMO3Q96BJ8 720 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 HEXIM2Q96MH2 286 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 CRACR2AQ9BSW2 395 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 CYLDQ9NQC7 956 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 SLC2A4RGQ9NR83 387 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 DUSP12Q9UNI6 340 aa11.35□□□□□ -0.59
UBE2D3-212ENST00000502563 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms