RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 CLDND1Q9NY35 253 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 SEPT10Q9P0V9 454 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 CACNG4Q9UBN1 327 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 UBA2Q9UBT2 640 aaPredicted RBP3.99□□□□□ -1.77
SUB1-202ENST00000502453 A0A0G2JPF8 293 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 HNRNPCL3B7ZW38 293 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 TNPO2O14787 897 aaKnown RBP3.98□□□□□ -1.77
SUB1-202ENST00000502453 KLK10O43240 276 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 PEX11AO75192 247 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 ENTPD3O75355 529 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 TMEM63AO94886 807 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 SMC2O95347 1197 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 AHSGP02765 367 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 TK1P04183 234 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 AMY2AP04746 511 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 HNRNPCL4P0DMR1 293 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 LAMP2P13473 410 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 BMP1P13497 986 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 FDPSP14324 419 aaKnown RBP3.98□□□□□ -1.77
SUB1-202ENST00000502453 AMY2BP19961 511 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 YY1P25490 414 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 TPP2P29144 1249 aaPredicted RBP3.98□□□□□ -1.77
SUB1-202ENST00000502453 HK3P52790 923 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 ITIH3Q06033 890 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.98□□□□□ -1.77
SUB1-202ENST00000502453 RALGDSQ12967 914 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 SPIDRQ14159 915 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 SYCP1Q15431 976 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 SEC23BQ15437 767 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 DEPDC1Q5TB30 811 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 WDR93Q6P2C0 686 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 TMC3Q7Z5M5 1100 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 CPNE8Q86YQ8 564 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 ZFPM1Q8IX07 1006 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 CCDC65Q8IXS2 484 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 AGBL5Q8NDL9 886 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 COPS5Q92905 334 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 PGAP3Q96FM1 320 aaPredicted RBP3.98□□□□□ -1.77
SUB1-202ENST00000502453 CLPTM1LQ96KA5 538 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 RTKNQ9BST9 563 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 ADI1Q9BV57 179 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 MTMR12Q9C0I1 747 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 SMG9Q9H0W8 520 aaKnown RBP3.98□□□□□ -1.77
SUB1-202ENST00000502453 HPS4Q9NQG7 708 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 SLC35C2Q9NQQ7 365 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 ACSS2Q9NR19 701 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 TM7SF3Q9NS93 570 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 ZSCAN32Q9NX65 697 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 CACNA2D2Q9NY47 1150 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 NINJ2Q9NZG7 142 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 RGL1Q9NZL6 768 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 TRAF3IP3Q9Y228 551 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 TRPV2Q9Y5S1 764 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 PLSCR1O15162 318 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 PALMO75781 387 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 PSMD10O75832 226 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 MPOP05164 745 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 CD33P20138 364 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 IL15P40933 162 aaPredicted RBP3.98□□□□□ -1.77
SUB1-202ENST00000502453 CARSP49589 748 aaKnown RBP3.98□□□□□ -1.77
SUB1-202ENST00000502453 GPLD1P80108 840 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 MPP7Q5T2T1 576 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 SPRYD7Q5W111 196 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 PSAPL1Q6NUJ1 521 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 FAM111BQ6SJ93 734 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 SUSD1Q6UWL2 747 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 UNQ6494/PRO21346Q6UXR6 183 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 OR2I1PQ8NGU4 316 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 RASSF8Q8NHQ8 419 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 ST7LQ8TDW4 575 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 NEIL1Q96FI4 390 aaPredicted RBP3.98□□□□□ -1.77
SUB1-202ENST00000502453 RBM17Q96I25 401 aaKnown RBP3.98□□□□□ -1.77
SUB1-202ENST00000502453 SH3GL1Q99961 368 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 TACO1Q9BSH4 297 aaKnown RBP3.98□□□□□ -1.77
SUB1-202ENST00000502453 NACAP1Q9BZK3 213 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 IL21RQ9HBE5 538 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 MID1IP1Q9NPA3 183 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 NRIP3Q9NQ35 241 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 PRDM8Q9NQV8 689 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 ARHGEF3Q9NR81 526 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 DAPP1Q9UN19 280 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 MTO1Q9Y2Z2 717 aaKnown RBP3.98□□□□□ -1.77
SUB1-202ENST00000502453 SMIM30A4D0T7 59 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 ZNF561-AS1K7EIQ3 104 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 PPP6R2O75170 966 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 PCNAP12004 261 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 HOXA11P31270 313 aaPredicted RBP3.98□□□□□ -1.77
SUB1-202ENST00000502453 GARSP41250 739 aaKnown RBP3.98□□□□□ -1.77
SUB1-202ENST00000502453 SLC19A1P41440 591 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 CCNHP51946 323 aaPredicted RBP3.98□□□□□ -1.77
SUB1-202ENST00000502453 SUPT20HL1Q3ZLR7 823 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 PRAMEF9Q5VWM5 478 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 LYSMD3Q7Z3D4 306 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 PDCL2Q8N4E4 241 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 C3orf20Q8ND61 904 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 OR6C4Q8NGE1 309 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 AGR3Q8TD06 166 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 MIEF2Q96C03 454 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 TUBGCP3Q96CW5 907 aa3.98□□□□□ -1.77
SUB1-202ENST00000502453 KREMEN1Q96MU8 473 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms