RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 C1orf141Q5JVX7 400 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 TRIM68Q6AZZ1 485 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 VASNQ6EMK4 673 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 NFRKBQ6P4R8 1299 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 SHQ1Q6PI26 577 aaKnown RBP4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 ETV3LQ6ZN32 361 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 CATSPERGQ6ZRH7 1159 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 UNC13DQ70J99 1090 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 RNF44Q7L0R7 432 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 RRAGAQ7L523 313 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 CCDC91Q7Z6B0 441 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 CILP2Q8IUL8 1156 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 RHOT1Q8IXI2 618 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 OTUD6BQ8N6M0 293 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 MAML1Q92585 1016 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 EID2BQ96D98 161 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 RNF125Q96EQ8 232 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 TWNKQ96RR1 684 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 PRPF18Q99633 342 aaKnown RBP4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 ADI1Q9BV57 179 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 USP44Q9H0E7 712 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 SLC6A17Q9H1V8 727 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 CHMP4BQ9H444 224 aaKnown RBP4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 EPS8L2Q9H6S3 715 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 SEPSECSQ9HD40 501 aaKnown RBP4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 SERHLQ9NQF3 203 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 DTLQ9NZJ0 730 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 RGL1Q9NZL6 768 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 XPO7Q9UIA9 1087 aaKnown RBP4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 BLOC1S6Q9UL45 172 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 ZNF215Q9UL58 517 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 KNSTRNQ9Y448 316 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 SBNO1A3KN83 1393 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 BCL9LQ86UU0 1499 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 RALGAPBQ86X10 1494 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 ALS2Q96Q42 1657 aa4.73□□□□□ -1.65
HMGB1P21-201ENST00000502313 FLT1P17948 1338 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 SYNRGQ9UMZ2 1314 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 SLIT2O94813 1529 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 OR14I1A6ND48 311 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 NT5C1B-RDH14C9J2C7 533 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 H3BNC9 293 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 NRP2O60462 931 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 TBCAO75347 108 aaKnown RBP4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 USP1O94782 785 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 ITGA2BP08514 1039 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 SYN1P17600 705 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 DESP17661 470 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 PTGS1P23219 599 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 ATP5F1P24539 256 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 GABRB3P28472 473 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 MLH1P40692 756 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 KCNC1P48547 511 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 FLT3LGP49771 235 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 GALK1P51570 392 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 SLC12A2P55011 1212 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 ACTR2P61160 394 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 PSMC1P62191 440 aaKnown RBP4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 NKX3-2P78367 333 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 MC1RQ01726 317 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 MYBPC3Q14896 1274 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 PPP2R5BQ15173 497 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 VWA3BQ502W6 1294 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 UBXN11Q5T124 520 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 MAP3K21Q5TCX8 1036 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 FYB2Q5VWT5 728 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 ISM2Q6H9L7 571 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 NAA16Q6N069 864 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 KIAA1841Q6NSI8 718 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 ALKBH5Q6P6C2 394 aaKnown RBP4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 ZC3H14Q6PJT7 736 aaKnown RBP4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 FAM180AQ6UWF9 173 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 BBS12Q6ZW61 710 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 CPLX4Q7Z7G2 160 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 DTX1Q86Y01 620 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 CCDC170Q8IYT3 715 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 ARRDC4Q8NCT1 418 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 Q8NFD4 153 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 RSAD2Q8WXG1 361 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 CLEC4DQ8WXI8 215 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 JAKMIP2Q96AA8 810 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 LRRC59Q96AG4 307 aaKnown RBP4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 NMD3Q96D46 503 aaKnown RBP4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 NEIL1Q96FI4 390 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 CALML4Q96GE6 196 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 SUCLG2Q96I99 432 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 TESK2Q96S53 571 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 EYA3Q99504 573 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 FOXB1Q99853 325 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 ANP32EQ9BTT0 268 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 DDX23Q9BUQ8 820 aaKnown RBP4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 PABPC3Q9H361 631 aaKnown RBP4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 TSPY26PQ9H489 355 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 RNPEPQ9H4A4 650 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 TRPV4Q9HBA0 871 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 SARS2Q9NP81 518 aaKnown RBP4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 INCENPQ9NQS7 918 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 PAK6Q9NQU5 681 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 UCKL1Q9NWZ5 548 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms