RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 GRM5P41594 1212 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 VCPP55072 806 aaKnown RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 TNNC1P63316 161 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 NOP14P78316 857 aaKnown RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 E2F2Q14209 437 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 NAB2Q15742 525 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 CLUL1Q15846 466 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 DENND2CQ68D51 928 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 TTC27Q6P3X3 843 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 POTEGQ6S5H5 508 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 UGT2A3Q6UWM9 527 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 B3GNT6Q6ZMB0 384 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 C3orf62Q6ZUJ4 267 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 USP43Q70EL4 1123 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 GPBP1Q86WP2 473 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 SNX29P2Q8IUI4 249 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 CHURC1Q8WUH1 139 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 C10orf82Q8WW14 230 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 LARP4BQ92615 738 aaKnown RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 CASP10Q92851 521 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 ATP6V0A1Q93050 837 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 NSMCE3Q96MG7 304 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 PYM1Q9BRP8 204 aaKnown RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 DEFB129Q9H1M3 183 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 ALG13Q9NP73 1137 aaKnown RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 TAS2R1Q9NYW7 299 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 PTTG2Q9NZH5 202 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 FNIP2Q9P278 1114 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 STX18Q9P2W9 335 aaKnown RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 HACL1Q9UJ83 578 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 APPL1Q9UKG1 709 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 PHTF1Q9UMS5 762 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 USP34Q70CQ2 3546 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 SLX4Q8IY92 1834 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 TRAF5O00463 557 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 ADCY6O43306 1168 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 RIPK2O43353 540 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 FGGP02679 453 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 EIF2AK2P19525 551 aaKnown RBP6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 PIK3CAP42336 1068 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 DNM2P50570 870 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 ARPC4P59998 168 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 CTTNQ14247 550 aaKnown RBP6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 LPIN1Q14693 890 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 CYP2A13Q16696 494 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 PATL1Q86TB9 770 aaKnown RBP6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 SRRM1Q8IYB3 904 aaKnown RBP6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 ALDH16A1Q8IZ83 802 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 LRRN4Q8WUT4 740 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 DCAF4Q8WV16 495 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 STARD8Q92502 1023 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 NSRP1Q9H0G5 558 aaKnown RBP6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 NPHS2Q9NP85 383 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 OSGEPQ9NPF4 335 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 AAASQ9NRG9 546 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 TXLNGQ9NUQ3 528 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 GIT1Q9Y2X7 761 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 TELO2Q9Y4R8 837 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 ZHX2Q9Y6X8 837 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 ROBO3Q96MS0 1386 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 CROCCQ5TZA2 2017 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 ANKRD34BA5PLL1 514 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 O00370 1275 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 TXNDC9O14530 226 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 RASGRF2O14827 1237 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 KATNA1O75449 491 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 ASNSP08243 561 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 POLR2MP0CAP2 368 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 BRAFP15056 766 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 EPHX2P34913 555 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 SKIV2L2P42285 1042 aaKnown RBP6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 KCNJ1P48048 391 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 TMED10P49755 219 aaKnown RBP6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 CDR2Q01850 454 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 DSG1Q02413 1049 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 PPIDQ08752 370 aaKnown RBP6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 CYLC2Q14093 348 aaPredicted RBP6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 MAP7Q14244 749 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 PDK1Q15118 436 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 TLR1Q15399 786 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 KIAA1755Q5JYT7 1200 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 DUPD1Q68J44 220 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 NANOGP8Q6NSW7 305 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 PRR23BQ6ZRT6 265 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 ANKMY2Q8IV38 441 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 FAM20CQ8IXL6 584 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 LRRC43Q8N309 656 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 ZFPM2Q8WW38 1151 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 EMID1Q96A84 441 aaPredicted RBP6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 SNTG2Q9NY99 539 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 PTPN22Q9Y2R2 807 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 MAD1L1Q9Y6D9 718 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 C10orf71Q711Q0 1435 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 MYO3BQ8WXR4 1341 aa6.04□□□□□ -1.44
SOX2-OT-218ENST00000498731 J3QRK9 145 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 KIAA0391O15091 583 aaKnown RBP6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 IL33O95760 270 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 CD247P20963 164 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 PTPN4P29074 926 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms