RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 GABRR2P28476 465 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 RBMS1P29558 406 aaKnown RBP5.21□□□□□ -1.58
CSTF1-207ENST00000498689 TNFSF9P41273 254 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 CTSKP43235 329 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 QARSP47897 775 aaKnown RBP5.21□□□□□ -1.58
CSTF1-207ENST00000498689 SLC26A2P50443 739 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 PTSQ03393 145 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.21□□□□□ -1.586e-7■■■■□ 26.5
CSTF1-207ENST00000498689 EGFLAMQ63HQ2 1017 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 SLC8B1Q6J4K2 584 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 BORAQ6PGQ7 559 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 MIB1Q86YT6 1006 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 SVOPQ8N4V2 548 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 LEMD2Q8NC56 503 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 SSH3Q8TE77 659 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 TOE1Q96GM8 510 aaKnown RBP5.21□□□□□ -1.58
CSTF1-207ENST00000498689 ATXN7L3BQ96GX2 97 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 ZKSCAN3Q9BRR0 538 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 NXF3Q9H4D5 531 aaKnown RBP5.21□□□□□ -1.58
CSTF1-207ENST00000498689 CD248Q9HCU0 757 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 ANO2Q9NQ90 1003 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 ZNF302Q9NR11 478 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 PPM1HQ9ULR3 514 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 HDAC5Q9UQL6 1122 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 BACE2Q9Y5Z0 518 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 UNC13CQ8NB66 2214 aa5.21□□□□□ -1.58
CSTF1-207ENST00000498689 AKAP6Q13023 2319 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 CNTRLQ7Z7A1 2325 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 CACNA1CQ13936 2221 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 A0A1B0GTQ1 180 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 PRR19A6NJB7 356 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 BTBD18B2RXH4 712 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 CASC3O15234 703 aaKnown RBP5.2□□□□□ -1.58
CSTF1-207ENST00000498689 FOXP2O15409 715 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 CYP26A1O43174 497 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 PRICKLE3O43900 615 aaPredicted RBP5.2□□□□□ -1.58
CSTF1-207ENST00000498689 SOAT2O75908 522 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 SLC3A2P08195 630 aaKnown RBP5.2□□□□□ -1.58
CSTF1-207ENST00000498689 SNRPB2P08579 225 aaKnown RBP5.2□□□□□ -1.58
CSTF1-207ENST00000498689 GNAI3P08754 354 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 CKMT2P17540 419 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 WEE1P30291 646 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 CSTF2P33240 577 aaKnown RBP eCLIP5.2□□□□□ -1.58
CSTF1-207ENST00000498689 BRCC3P46736 316 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 AFF3P51826 1226 aaKnown RBP5.2□□□□□ -1.58
CSTF1-207ENST00000498689 BNIP3Q12983 259 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 ILKQ13418 452 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 AMHR2Q16671 573 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 INF2Q27J81 1249 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 EOGTQ5NDL2 527 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 CLEC14AQ86T13 490 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 HOMER1Q86YM7 354 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 WDR63Q8IWG1 891 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 TP53INP2Q8IXH6 220 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 CKAP2LQ8IYA6 745 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 CCDC116Q8IYX3 515 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 CPA6Q8N4T0 437 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 ZNF276Q8N554 614 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 SAMD3Q8N6K7 520 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 TTC16Q8NEE8 873 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 C9orf43Q8TAL5 461 aaPredicted RBP5.2□□□□□ -1.58
CSTF1-207ENST00000498689 SAP25Q8TEE9 199 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 MTMR8Q96EF0 704 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 SEC62Q99442 399 aaKnown RBP5.2□□□□□ -1.58
CSTF1-207ENST00000498689 SMR3AQ99954 134 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 OSBPL2Q9H1P3 480 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 LINC00597Q9H2U6 94 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 TASP1Q9H6P5 420 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 IFT122Q9HBG6 1241 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 LY9Q9HBG7 655 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 KCNH7Q9NS40 1196 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 WSB2Q9NYS7 404 aaPredicted RBP5.2□□□□□ -1.58
CSTF1-207ENST00000498689 SEL1LQ9UBV2 794 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 YIPF1Q9Y548 306 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 PRKDCP78527 4128 aaKnown RBP5.2□□□□□ -1.58
CSTF1-207ENST00000498689 HRNRQ86YZ3 2850 aaPredicted RBP5.2□□□□□ -1.58
CSTF1-207ENST00000498689 POLEQ07864 2286 aa5.2□□□□□ -1.58
CSTF1-207ENST00000498689 CDC14CA4D256 554 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 METTL12A8MUP2 240 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 TCP11X1B4DZS4 312 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 MEIS2O14770 477 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 ZBTB5O15062 677 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 MAGEB2O15479 319 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 ORC4O43929 436 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 OPA1O60313 960 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 ZNF217O75362 1048 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 TNFSF15O95150 251 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 GNAI2P04899 355 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 ACP1P24666 158 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 TMOD1P28289 359 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 CD6P30203 668 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 ASIC1P78348 528 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 KDSRQ06136 332 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 KLRB1Q12918 225 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 GRIK3Q13003 919 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 CBLBQ13191 982 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 NAB2Q15742 525 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 INAVAQ3KP66 663 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 FAM160B1Q5W0V3 765 aa5.19□□□□□ -1.58
CSTF1-207ENST00000498689 TMEM198Q66K66 360 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms