RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 ARHGAP26Q9UNA1 814 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 CELSR3Q9NYQ7 3312 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 PTPRBP23467 1997 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 ITPR1Q14643 2758 aa12.52□□□□□ -0.41
CDK9-205ENST00000498339 PLXNB3Q9ULL4 1909 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 VWA3AA6NCI4 1184 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 UPK3BL1B0FP48 263 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 UPK3BL2E5RIL1 263 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 LEFTY2O00292 366 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 TRAK2O60296 914 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 TBCAO75347 108 aaKnown RBP12.51□□□□□ -0.41
CDK9-205ENST00000498339 KAT7O95251 611 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 ABL1P00519 1130 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 CYP17A1P05093 508 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 HOXD12P35452 270 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 TFAMQ00059 246 aaKnown RBP12.51□□□□□ -0.41
CDK9-205ENST00000498339 SOWAHCQ53LP3 525 aaPredicted RBP12.51□□□□□ -0.41
CDK9-205ENST00000498339 SPDYCQ5MJ68 293 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 SLC39A4Q6P5W5 647 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 RABEPKQ7Z6M1 372 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 SFTPA1Q8IWL2 248 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 IL17RCQ8NAC3 791 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 OR2I1PQ8NGU4 316 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 RASSF8Q8NHQ8 419 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 MYRFLQ96LU7 910 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 PNKPQ96T60 521 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 ACBD6Q9BR61 282 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 ARHGEF4Q9NR80 690 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 SMPD4Q9NXE4 827 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 GCNT4Q9P109 453 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 L1RE1Q9UN81 338 aa12.51□□□□□ -0.41
CDK9-205ENST00000498339 TISP43B9A030 160 aa12.5□□□□□ -0.41
CDK9-205ENST00000498339 ZIC2O95409 532 aaPredicted RBP12.5□□□□□ -0.41
CDK9-205ENST00000498339 ITGB3P05106 788 aa12.5□□□□□ -0.41
CDK9-205ENST00000498339 SYPP08247 313 aa12.5□□□□□ -0.41
CDK9-205ENST00000498339 SERPINF2P08697 491 aa12.5□□□□□ -0.41
CDK9-205ENST00000498339 SCP2P22307 547 aa12.5□□□□□ -0.41
CDK9-205ENST00000498339 POLR2BP30876 1174 aaKnown RBP12.5□□□□□ -0.41
CDK9-205ENST00000498339 SLC6A11P48066 632 aa12.5□□□□□ -0.41
CDK9-205ENST00000498339 TOB1P50616 345 aaPredicted RBP12.5□□□□□ -0.41
CDK9-205ENST00000498339 HMGN5P82970 282 aaKnown RBP12.5□□□□□ -0.41
CDK9-205ENST00000498339 ATP2C1P98194 919 aaPredicted RBP12.5□□□□□ -0.41
CDK9-205ENST00000498339 HNRNPDQ14103 355 aaKnown RBP12.5□□□□□ -0.41
CDK9-205ENST00000498339 CCDC142Q17RM4 750 aa12.5□□□□□ -0.41
CDK9-205ENST00000498339 MAP7D1Q3KQU3 841 aa12.5□□□□□ -0.41
CDK9-205ENST00000498339 HSF5Q4G112 596 aaPredicted RBP12.5□□□□□ -0.41
CDK9-205ENST00000498339 ARSHQ5FYA8 562 aa12.5□□□□□ -0.41
CDK9-205ENST00000498339 HYIQ5T013 277 aa12.5□□□□□ -0.41
CDK9-205ENST00000498339 SLC36A4Q6YBV0 504 aa12.5□□□□□ -0.41
CDK9-205ENST00000498339 RAB44Q7Z6P3 723 aaPredicted RBP12.5□□□□□ -0.41
CDK9-205ENST00000498339 TMEM86AQ8N2M4 240 aa12.5□□□□□ -0.41
CDK9-205ENST00000498339 HNRNPLLQ8WVV9 542 aaKnown RBP12.5□□□□□ -0.41
CDK9-205ENST00000498339 POMGNT1Q8WZA1 660 aa12.5□□□□□ -0.41
CDK9-205ENST00000498339 COL26A1Q96A83 441 aa12.5□□□□□ -0.41
CDK9-205ENST00000498339 CAMK1GQ96NX5 476 aa12.5□□□□□ -0.41
CDK9-205ENST00000498339 LLPHQ9BRT6 129 aaKnown RBP12.5□□□□□ -0.41
CDK9-205ENST00000498339 TRPM5Q9NZQ8 1165 aa12.5□□□□□ -0.41
CDK9-205ENST00000498339 AGAP1Q9UPQ3 857 aa12.5□□□□□ -0.41
CDK9-205ENST00000498339 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.49□□□□□ -0.41
CDK9-205ENST00000498339 ANKRD63C9JTQ0 380 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 SLC9A3R1O14745 358 aaPredicted RBP12.49□□□□□ -0.41
CDK9-205ENST00000498339 ZBTB24O43167 697 aaPredicted RBP12.49□□□□□ -0.41
CDK9-205ENST00000498339 IL18RAPO95256 599 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 ADH1CP00326 375 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 KRT19P08727 400 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 ADH5P11766 374 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 TCF3P15923 654 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 ANXA13P27216 316 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 PCSK1P29120 753 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 ABCD1P33897 745 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 ZNF33AQ06730 810 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 DHCR24Q15392 516 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 TRIP6Q15654 476 aaKnown RBP12.49□□□□□ -0.41
CDK9-205ENST00000498339 GAB4Q2WGN9 574 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 TMEM119Q4V9L6 283 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 EMC10Q5UCC4 262 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 PEAR1Q5VY43 1037 aaPredicted RBP12.49□□□□□ -0.41
CDK9-205ENST00000498339 MCTP1Q6DN14 999 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 SLFN12LQ6IEE8 588 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 C4orf50Q6ZRC1 276 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 C12orf40Q86WS4 652 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 ADGRF2Q8IZF7 708 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 RGL4Q8IZJ4 473 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 KCTD17Q8N5Z5 321 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 PNPLA1Q8N8W4 532 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 LRRC15Q8TF66 581 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 NOC3LQ8WTT2 800 aaKnown RBP12.49□□□□□ -0.41
CDK9-205ENST00000498339 LRIG1Q96JA1 1093 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 HSPA12BQ96MM6 686 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 R3HCC1Q9Y3T6 440 aaKnown RBP12.49□□□□□ -0.41
CDK9-205ENST00000498339 SNX9Q9Y5X1 595 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 CPQQ9Y646 472 aa12.49□□□□□ -0.41
CDK9-205ENST00000498339 BPTFQ12830 3046 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 FAM221BA6H8Z2 402 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 ARHGAP33O14559 1287 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 HCRTO43612 131 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 SH3BP5O60239 455 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 FTH1P19P0C7X4 201 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 GRIK1P39086 918 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 EIF2DP41214 584 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms