RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 GPR152Q8TDT2 470 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 HDAC7Q8WUI4 952 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 SLC20A1Q8WUM9 679 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 ZNF512Q96ME7 567 aaPredicted RBP12.11□□□□□ -0.47
CTTN-208ENST00000498223 DUSP16Q9BY84 665 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 CRISPLD1Q9H336 500 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 DMAP1Q9NPF5 467 aaPredicted RBP12.11□□□□□ -0.47
CTTN-208ENST00000498223 AIPL1Q9NZN9 384 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 IMPACTQ9P2X3 320 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 MAGED2Q9UNF1 606 aaPredicted RBP12.11□□□□□ -0.47
CTTN-208ENST00000498223 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.11□□□□□ -0.47
CTTN-208ENST00000498223 CCDC195A0A1B0GUA6 201 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 FAM170AA1A519 330 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 F8VP50 259 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 XYLBO75191 536 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 RFPL2O75678 378 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 VNN2O95498 520 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 SERPING1P05155 500 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 MMEP08473 750 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 SETSIPP0DME0 302 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 NPR3P17342 541 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 CDR2Q01850 454 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 PDE4CQ08493 712 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 TBX2Q13207 712 aaPredicted RBP12.1□□□□□ -0.47
CTTN-208ENST00000498223 ANKRD54Q6NXT1 300 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 DENND1BQ6P3S1 775 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 TMC5Q6UXY8 1006 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 RTL10Q7L3V2 364 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 IRF2BP2Q7Z5L9 587 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 ITIH5Q86UX2 942 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 VPS36Q86VN1 386 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 ZNF677Q86XU0 584 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 C12orf76Q8N812 135 aaPredicted RBP12.1□□□□□ -0.47
CTTN-208ENST00000498223 VN1R2Q8NFZ6 395 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 EPS8L1Q8TE68 723 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 SYN2Q92777 582 aaPredicted RBP12.1□□□□□ -0.47
CTTN-208ENST00000498223 SECISBP2LQ93073 1101 aaKnown RBP12.1□□□□□ -0.47
CTTN-208ENST00000498223 NOX5Q96PH1 765 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 KCNK16Q96T55 309 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 SMOQ99835 787 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 AGPAT1Q99943 283 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 ZSWIM1Q9BR11 485 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.1□□□□□ -0.47
CTTN-208ENST00000498223 DEF6Q9H4E7 631 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 HAUS4Q9H6D7 363 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 UBE2ZQ9H832 354 aaPredicted RBP12.1□□□□□ -0.47
CTTN-208ENST00000498223 SFXN1Q9H9B4 322 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 ST7Q9NRC1 585 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 ABHD10Q9NUJ1 306 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 HSFX1Q9UBD0 423 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 BZW2Q9Y6E2 419 aaKnown RBP12.1□□□□□ -0.47
CTTN-208ENST00000498223 REV3LO60673 3130 aa12.1□□□□□ -0.47
CTTN-208ENST00000498223 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.09□□□□□ -0.47
CTTN-208ENST00000498223 BEST1O76090 585 aa12.09□□□□□ -0.47
CTTN-208ENST00000498223 GLP2RO95838 553 aa12.09□□□□□ -0.47
CTTN-208ENST00000498223 PTMAP06454 111 aaKnown RBP12.09□□□□□ -0.47
CTTN-208ENST00000498223 CFHP08603 1231 aa12.09□□□□□ -0.47
CTTN-208ENST00000498223 HNRNPA1P09651 372 aaKnown RBP eCLIP12.09□□□□□ -0.47
CTTN-208ENST00000498223 RGS7P49802 495 aa12.09□□□□□ -0.47
CTTN-208ENST00000498223 CACNA2D1P54289 1103 aa12.09□□□□□ -0.47
CTTN-208ENST00000498223 CLUL1Q15846 466 aa12.09□□□□□ -0.47
CTTN-208ENST00000498223 CLEC20AQ6ZU45 233 aa12.09□□□□□ -0.47
CTTN-208ENST00000498223 TTC30AQ86WT1 665 aa12.09□□□□□ -0.47
CTTN-208ENST00000498223 TMEM35BQ8NCS4 154 aa12.09□□□□□ -0.47
CTTN-208ENST00000498223 STKLD1Q8NE28 680 aa12.09□□□□□ -0.47
CTTN-208ENST00000498223 SMG7Q92540 1137 aaKnown RBP12.09□□□□□ -0.47
CTTN-208ENST00000498223 PABPC5Q96DU9 382 aaKnown RBP12.09□□□□□ -0.47
CTTN-208ENST00000498223 C8orf48Q96LL4 319 aa12.09□□□□□ -0.47
CTTN-208ENST00000498223 SYNCQ9H7C4 482 aa12.09□□□□□ -0.47
CTTN-208ENST00000498223 LRRC4Q9HBW1 653 aa12.09□□□□□ -0.47
CTTN-208ENST00000498223 ZDHHC7Q9NXF8 308 aa12.09□□□□□ -0.47
CTTN-208ENST00000498223 NOCTQ9UK39 431 aaKnown RBP12.09□□□□□ -0.47
CTTN-208ENST00000498223 PCDHGC3Q9UN70 934 aa12.09□□□□□ -0.47
CTTN-208ENST00000498223 NOTCH4Q99466 2003 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 SLC38A8A6NNN8 435 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 PIK3R2O00459 728 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 XPO1O14980 1071 aaKnown RBP12.08□□□□□ -0.48
CTTN-208ENST00000498223 CSH1P0DML2 217 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 CSH2P0DML3 217 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 LCP1P13796 627 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 HOXB8P17481 243 aaPredicted RBP12.08□□□□□ -0.48
CTTN-208ENST00000498223 PTPN2P17706 415 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 ATF6P18850 670 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 SNX16P57768 344 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 LEXMQ3ZCV2 418 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 NAA35Q5VZE5 725 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 E4F1Q66K89 784 aaPredicted RBP12.08□□□□□ -0.48
CTTN-208ENST00000498223 CES5AQ6NT32 575 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 TMEM184AQ6ZMB5 413 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 TRIM72Q6ZMU5 477 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 PIGZQ86VD9 579 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 NUP93Q8N1F7 819 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 TC2NQ8N9U0 490 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 MSANTD4Q8NCY6 345 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 IPO4Q8TEX9 1081 aaKnown RBP12.08□□□□□ -0.48
CTTN-208ENST00000498223 SPATA17Q96L03 361 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 DNAJC7Q99615 494 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 CORO1BQ9BR76 489 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 PRKD2Q9BZL6 878 aa12.08□□□□□ -0.48
CTTN-208ENST00000498223 TMEM30AQ9NV96 361 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms