RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ZRANB2O95218 330 aaKnown RBP eCLIP8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 FAM200BP0CF97 657 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 TCF4P15884 667 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 NPR3P17342 541 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 LMO2P25791 158 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 PCSK1P29120 753 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 CHRNA3P32297 505 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 ACADSBP45954 432 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 PLA2G4AP47712 749 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 LHX1P48742 406 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 SLC8A3P57103 927 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 DR1Q01658 176 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 GUCY2DQ02846 1103 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 SLC25A11Q02978 314 aaKnown RBP8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 DHX34Q14147 1143 aaKnown RBP8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 HADHQ16836 314 aaKnown RBP8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 CCDC142Q17RM4 750 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 CLLU1OSQ5K130 101 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 OLFML1Q6UWY5 402 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 SLC24A5Q71RS6 500 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 POLNQ7Z5Q5 900 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 METTL23Q86XA0 190 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 ZDHHC17Q8IUH5 632 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 IFT20Q8IY31 132 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 CRYBG2Q8N1P7 616 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 C12orf50Q8NA57 414 aaPredicted RBP8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 ANKRD52Q8NB46 1076 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 EXD1Q8NHP7 514 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 SPATA18Q8TC71 538 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 HDAC7Q8WUI4 952 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 HNRNPLLQ8WVV9 542 aaKnown RBP8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 SEPT8Q92599 483 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 APBB2Q92870 758 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 SLITRK1Q96PX8 696 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 LPIN3Q9BQK8 851 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 PAAF1Q9BRP4 392 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 TRIM51Q9BSJ1 452 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 SLC4A5Q9BY07 1137 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 RAB17Q9H0T7 212 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 CYLDQ9NQC7 956 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 DDX56Q9NY93 547 aaKnown RBP8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 DSEQ9UL01 958 aa8.49□□□□□ -1.05
PDZRN3-212ENST00000498048 TCRBV7S2A1N4TA0A589 114 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 LRRD1A4D1F6 860 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 FAM187AA6NFU0 413 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 C2CD4BA6NLJ0 364 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 F8VP50 259 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 I3L4J1 428 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 GABRDO14764 452 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 NBNO60934 754 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 LRCH4O75427 683 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 DAB1O75553 588 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 GRAP2O75791 330 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 RNF8O76064 485 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 B3GAT3O94766 335 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 EOMESO95936 686 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 KRT7P08729 469 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 FAM163BP0C2L3 166 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 MYBL2P10244 700 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 RALAP11233 206 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 LCP1P13796 627 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 PTPN1P18031 435 aaKnown RBP8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 PAX3P23760 479 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 SDC4P31431 198 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 RFC1P35251 1148 aaPredicted RBP8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 FLT3P36888 993 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 SCNN1AP37088 669 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 BRCC3P46736 316 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 FNTAP49354 379 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 CDK7P50613 346 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 SLC6A3Q01959 620 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 RNASELQ05823 741 aaKnown RBP8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 ADIGQ0VDE8 80 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 HLTFQ14527 1009 aaKnown RBP eCLIP8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 SIX1Q15475 284 aaPredicted RBP8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 CYP1B1Q16678 543 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 CDO1Q16878 200 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 SMTNL2Q2TAL5 461 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 TIGD5Q53EQ6 642 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 PLEKHG4Q58EX7 1191 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 NOMO2Q5JPE7 1267 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 BEND6Q5SZJ8 279 aaPredicted RBP8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 LRRC38Q5VT99 294 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 PMF1Q6P1K2 205 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 MAATS1Q7Z4T9 603 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 ABI1Q8IZP0 508 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 FUKQ8N0W3 1084 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 SIX6OS1Q8N1H7 587 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 PRELID2Q8N945 189 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 AENQ8WTP8 325 aaKnown RBP8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 STK32AQ8WU08 396 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 PTCD2Q8WV60 388 aaKnown RBP8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 CASKIN2Q8WXE0 1202 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 MYLPFQ96A32 169 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 MAGOHBQ96A72 148 aaKnown RBP8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 ACSF2Q96CM8 615 aaPredicted RBP8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 SMARCD1Q96GM5 515 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 CCDC114Q96M63 670 aa8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 FAM193BQ96PV7 902 aaPredicted RBP8.48□□□□□ -1.05
PDZRN3-212ENST00000498048 HNRNPABQ99729 332 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms