RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 UBE2Q2LH0YL09 131 aa4.94□□□□□ -1.62
SMC4-227ENST00000497984 H3BNC9 293 aa4.94□□□□□ -1.62
SMC4-227ENST00000497984 CBSLP0DN79 551 aa4.94□□□□□ -1.62
SMC4-227ENST00000497984 LRPAP1P30533 357 aa4.94□□□□□ -1.62
SMC4-227ENST00000497984 CBSP35520 551 aa4.94□□□□□ -1.62
SMC4-227ENST00000497984 ALDH5A1P51649 535 aaPredicted RBP4.94□□□□□ -1.62
SMC4-227ENST00000497984 HTRA4P83105 476 aaPredicted RBP4.94□□□□□ -1.62
SMC4-227ENST00000497984 SHC4Q6S5L8 630 aa4.94□□□□□ -1.62
SMC4-227ENST00000497984 MRPL10Q7Z7H8 261 aaKnown RBP4.94□□□□□ -1.62
SMC4-227ENST00000497984 ZNF398Q8TD17 642 aa4.94□□□□□ -1.62
SMC4-227ENST00000497984 OSCP1Q8WVF1 389 aa4.94□□□□□ -1.62
SMC4-227ENST00000497984 VCPIP1Q96JH7 1222 aa4.94□□□□□ -1.62
SMC4-227ENST00000497984 MESP1Q9BRJ9 268 aa4.94□□□□□ -1.62
SMC4-227ENST00000497984 ASIC5Q9NY37 505 aa4.94□□□□□ -1.62
SMC4-227ENST00000497984 LY6G6EA0A0G2JKS1 128 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 VNN1O95497 513 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 PRKCBP05771 671 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 CCKARP32238 428 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 UCP3P55916 312 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 E2F1Q01094 437 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 RBMS2Q15434 407 aaKnown RBP4.93□□□□□ -1.62
SMC4-227ENST00000497984 TWIST1Q15672 202 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 FAM187BQ17R55 369 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 LY6KQ17RY6 165 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 KHDC1LQ5JSQ8 128 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 SERPINA13PQ6UXR4 307 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 DPY19L3Q6ZPD9 716 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 BCDIN3DQ7Z5W3 292 aaKnown RBP4.93□□□□□ -1.62
SMC4-227ENST00000497984 SLC15A3Q8IY34 581 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 ABRAQ8N0Z2 381 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 MVB12AQ96EY5 273 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 PRR25Q96S07 402 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 SMAD5Q99717 465 aaKnown RBP4.93□□□□□ -1.62
SMC4-227ENST00000497984 EFHD1Q9BUP0 239 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 MED16Q9Y2X0 877 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 SNX14Q9Y5W7 946 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 FER1L4A9Z1Z3 1794 aa4.93□□□□□ -1.62
SMC4-227ENST00000497984 MYMKA6NI61 221 aa4.92□□□□□ -1.62
SMC4-227ENST00000497984 ADAM10O14672 748 aa4.92□□□□□ -1.62
SMC4-227ENST00000497984 PRF1P14222 555 aa4.92□□□□□ -1.62
SMC4-227ENST00000497984 HOXD9P28356 352 aaPredicted RBP4.92□□□□□ -1.62
SMC4-227ENST00000497984 KCNJ5P48544 419 aa4.92□□□□□ -1.62
SMC4-227ENST00000497984 SLC11A2P49281 568 aa4.92□□□□□ -1.62
SMC4-227ENST00000497984 WNT3P56703 355 aa4.92□□□□□ -1.62
SMC4-227ENST00000497984 PSG6Q00889 435 aa4.92□□□□□ -1.62
SMC4-227ENST00000497984 ZNF268Q14587 947 aaPredicted RBP4.92□□□□□ -1.62
SMC4-227ENST00000497984 TRIM71Q2Q1W2 868 aaKnown RBP4.92□□□□□ -1.62
SMC4-227ENST00000497984 C10orf25Q5T742 122 aa4.92□□□□□ -1.62
SMC4-227ENST00000497984 CAND1Q86VP6 1230 aaKnown RBP4.92□□□□□ -1.62
SMC4-227ENST00000497984 IZUMO1Q8IYV9 350 aa4.92□□□□□ -1.62
SMC4-227ENST00000497984 PLBD2Q8NHP8 589 aa4.92□□□□□ -1.62
SMC4-227ENST00000497984 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.92□□□□□ -1.62
SMC4-227ENST00000497984 CDK5RAP3Q96JB5 506 aa4.92□□□□□ -1.62
SMC4-227ENST00000497984 MRGPRX1Q96LB2 322 aa4.92□□□□□ -1.62
SMC4-227ENST00000497984 SARS2Q9NP81 518 aaKnown RBP4.92□□□□□ -1.62
SMC4-227ENST00000497984 TMX2Q9Y320 296 aa4.92□□□□□ -1.62
SMC4-227ENST00000497984 AP4M1O00189 453 aa4.91□□□□□ -1.62
SMC4-227ENST00000497984 DSCR3O14972 297 aa4.91□□□□□ -1.62
SMC4-227ENST00000497984 SNUPNO95149 360 aaKnown RBP4.91□□□□□ -1.62
SMC4-227ENST00000497984 A1BGP04217 495 aa4.91□□□□□ -1.62
SMC4-227ENST00000497984 ALDH2P05091 517 aa4.91□□□□□ -1.62
SMC4-227ENST00000497984 MYCLP12524 364 aaPredicted RBP4.91□□□□□ -1.62
SMC4-227ENST00000497984 KCNA3P22001 575 aa4.91□□□□□ -1.62
SMC4-227ENST00000497984 DGKEP52429 567 aa4.91□□□□□ -1.62
SMC4-227ENST00000497984 CCDC157Q569K6 752 aa4.91□□□□□ -1.62
SMC4-227ENST00000497984 RNF187Q5TA31 235 aaPredicted RBP4.91□□□□□ -1.62
SMC4-227ENST00000497984 PIP4P1Q86T03 277 aa4.91□□□□□ -1.62
SMC4-227ENST00000497984 ADAMTS18Q8TE60 1221 aa4.91□□□□□ -1.62
SMC4-227ENST00000497984 HSPBAP1Q96EW2 488 aa4.91□□□□□ -1.62
SMC4-227ENST00000497984 MMS19Q96T76 1030 aa4.91□□□□□ -1.62
SMC4-227ENST00000497984 DPCDQ9BVM2 203 aaPredicted RBP4.91□□□□□ -1.62
SMC4-227ENST00000497984 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.91□□□□□ -1.62
SMC4-227ENST00000497984 CNTNAP2Q9UHC6 1331 aa4.91□□□□□ -1.62
SMC4-227ENST00000497984 SBNO2Q9Y2G9 1366 aa4.91□□□□□ -1.62
SMC4-227ENST00000497984 TTC3P53804 2025 aa4.9□□□□□ -1.62
SMC4-227ENST00000497984 CCDC187A0A096LP49 1063 aa4.9□□□□□ -1.63
SMC4-227ENST00000497984 IL33O95760 270 aa4.9□□□□□ -1.63
SMC4-227ENST00000497984 TMEM191BP0C7N4 346 aa4.9□□□□□ -1.63
SMC4-227ENST00000497984 CYP2C9P11712 490 aa4.9□□□□□ -1.63
SMC4-227ENST00000497984 AKAP5P24588 427 aa4.9□□□□□ -1.63
SMC4-227ENST00000497984 GAS2L3Q86XJ1 694 aa4.9□□□□□ -1.63
SMC4-227ENST00000497984 ADAMTS15Q8TE58 950 aa4.9□□□□□ -1.63
SMC4-227ENST00000497984 PNISRQ8TF01 805 aaKnown RBP4.9□□□□□ -1.63
SMC4-227ENST00000497984 NSMCE1Q8WV22 266 aa4.9□□□□□ -1.63
SMC4-227ENST00000497984 RSPRY1Q96DX4 576 aa4.9□□□□□ -1.63
SMC4-227ENST00000497984 FYTTD1Q96QD9 318 aaKnown RBP4.9□□□□□ -1.63
SMC4-227ENST00000497984 IGKV2D-30A0A075B6S6 120 aa4.89□□□□□ -1.63
SMC4-227ENST00000497984 FAM90A10PA6NDY2 464 aa4.89□□□□□ -1.63
SMC4-227ENST00000497984 BTBD19C9JJ37 291 aa4.89□□□□□ -1.63
SMC4-227ENST00000497984 TMEM232C9JQI7 657 aa4.89□□□□□ -1.63
SMC4-227ENST00000497984 IGSF3O75054 1194 aa4.89□□□□□ -1.63
SMC4-227ENST00000497984 FGAP02671 866 aa4.89□□□□□ -1.63
SMC4-227ENST00000497984 THP07101 528 aa4.89□□□□□ -1.63
SMC4-227ENST00000497984 GHRHRQ02643 423 aa4.89□□□□□ -1.63
SMC4-227ENST00000497984 SRSF1Q07955 248 aaKnown RBP eCLIP4.89□□□□□ -1.63
SMC4-227ENST00000497984 LEXMQ3ZCV2 418 aa4.89□□□□□ -1.63
SMC4-227ENST00000497984 MIDNQ504T8 468 aa4.89□□□□□ -1.63
SMC4-227ENST00000497984 SFTPA1Q8IWL2 248 aa4.89□□□□□ -1.63
SMC4-227ENST00000497984 HPS3Q969F9 1004 aa4.89□□□□□ -1.63
SMC4-227ENST00000497984 CGRRF1Q99675 332 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms