RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 ARSAP15289 507 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 PFKLP17858 780 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 HDCP19113 662 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 CASP1P29466 404 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 ATICP31939 592 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 PPP3CCP48454 512 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 DMWDQ09019 674 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 NR1H3Q13133 447 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 CUL4BQ13620 913 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 BMT2Q1RMZ1 405 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 MDH1BQ5I0G3 518 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 FSTL4Q6MZW2 842 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 DENND5BQ6ZUT9 1274 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 CEP68Q76N32 757 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 ARL14EPQ8N8R7 260 aaPredicted RBP12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 OSCP1Q8WVF1 389 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 SYAP1Q96A49 352 aaPredicted RBP12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 PCED1BQ96HM7 432 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 CYP2S1Q96SQ9 504 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 MRPL45Q9BRJ2 306 aaKnown RBP12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 DLL3Q9NYJ7 618 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 TRPM5Q9NZQ8 1165 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 CDV3Q9UKY7 258 aaKnown RBP12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 SLC8A2Q9UPR5 921 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 GPR179Q6PRD1 2367 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 C2orf78A6NCI8 922 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 OTOL1A6NHN0 477 aaPredicted RBP12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 HRO43593 1189 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 LRP3O75074 770 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 SLFN14P0C7P3 912 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 PTPN1P18031 435 aaKnown RBP12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 DRD1P21728 446 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 AP3M2P53677 418 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 MYL6P60660 151 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 DNM1Q05193 864 aaKnown RBP12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 SPEM2Q0P670 501 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 USP4Q13107 963 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 BIRC3Q13489 604 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 ZNF77Q15935 545 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 FBXO43Q4G163 708 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 WDR5BQ86VZ2 330 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 SH3RF2Q8TEC5 729 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 C8orf48Q96LL4 319 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 SLC22A12Q96S37 553 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 P2RY13Q9BPV8 354 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 TMEM121BQ9BXQ6 578 aaPredicted RBP12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 ELOVL4Q9GZR5 314 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 ECT2Q9H8V3 914 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 EXOC1Q9NV70 894 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 GCNT4Q9P109 453 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 NXF1Q9UBU9 619 aaKnown RBP12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 ARHGAP26Q9UNA1 814 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 DMDP11532 3685 aa12.54□□□□□ -0.4
NUDCD3-211ENST00000497978 A8MXQ7 604 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 F8VP50 259 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 STAU1O95793 577 aaKnown RBP12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 EGFP01133 1207 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 TCF3P15923 654 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 GJA4P35212 333 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 GALK1P51570 392 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 NOP14P78316 857 aaKnown RBP12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 PSMD2Q13200 908 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 TDRD10Q5VZ19 366 aaKnown RBP12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 GRAMD1CQ8IYS0 662 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 CCDC26Q8TAB7 109 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 RIN3Q8TB24 985 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 ZNF516Q92618 1163 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 CD101Q93033 1021 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 SLITRK1Q96PX8 696 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 TTLL2Q9BWV7 592 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 C2orf42Q9NWW7 574 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 USP25Q9UHP3 1055 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 SERTAD1Q9UHV2 236 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 RCOR1Q9UKL0 485 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 WNT6Q9Y6F9 365 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 ATP8B3O60423 1300 aa12.53□□□□□ -0.4
NUDCD3-211ENST00000497978 GREB1Q4ZG55 1949 aa12.52□□□□□ -0.4
NUDCD3-211ENST00000497978 ANAPC1Q9H1A4 1944 aa12.52□□□□□ -0.4
NUDCD3-211ENST00000497978 ZNF292O60281 2723 aa12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 CCDC163A0A0D9SF12 145 aa12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 FOXD2O60548 495 aaPredicted RBP12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 RNF40O75150 1001 aa12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 NFATC1O95644 943 aa12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 ABL1P00519 1130 aa12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 TGM1P22735 817 aa12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 USP46P62068 366 aa12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 SRSF5Q13243 272 aaKnown RBP12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 PKP1Q13835 747 aa12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 ZNF699Q32M78 642 aa12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 EML3Q32P44 896 aa12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 ZNF667Q5HYK9 610 aa12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 CAMKK1Q8N5S9 505 aa12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 B3GALNT2Q8NCR0 500 aa12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 CHFRQ96EP1 664 aa12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 PAGE5Q96GU1 130 aa12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 RTKNQ9BST9 563 aa12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 XYLT2Q9H1B5 865 aa12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 PARD6AQ9NPB6 346 aa12.52□□□□□ -0.41
NUDCD3-211ENST00000497978 PTPRDP23468 1912 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms