RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 RNF148Q8N7C7 305 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 FNDC8Q8TC99 324 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 TEKT1Q969V4 418 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 LRGUKQ96M69 825 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 MTMR4Q9NYA4 1195 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 MAD1L1Q9Y6D9 718 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 IQANK1A0A1B0GTG1 560 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 STIP1P31948 543 aaKnown RBP13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 SHROOM1Q2M3G4 852 aaPredicted RBP13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 MFSD7Q6UXD7 560 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 C16orf86Q6ZW13 317 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 FAM71AQ8IYT1 594 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 SEMA4DQ92854 862 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 TIMMDC1Q9NPL8 285 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 XPNPEP1Q9NQW7 623 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 OLFML3Q9NRN5 406 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 WDR37Q9Y2I8 494 aa13.63□□□□□ -0.23
GAPVD1-220ENST00000497580 MSH4O15457 936 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 LIASO43766 372 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 ALDH1B1P30837 517 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 ZNF543Q08ER8 600 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 ATP1A4Q13733 1029 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 ANKDD1AQ495B1 522 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 TMIGD2Q96BF3 282 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 APOPT1Q96IL0 206 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 CCT7Q99832 543 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 CORO1BQ9BR76 489 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 SPATA31A1Q5TZJ5 1347 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 TNS2Q63HR2 1409 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 MYH11P35749 1972 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 CAPN14A8MX76 684 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 COPAP53621 1224 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 SPIRE1Q08AE8 756 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 GRM2Q14416 872 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 LPCAT2Q7L5N7 544 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 SLF2Q8IX21 1173 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 SMYD1Q8NB12 490 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 OXCT2Q9BYC2 517 aaPredicted RBP13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 KCNK4Q9NYG8 393 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 TSC22D4Q9Y3Q8 395 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 LYPLA1O75608 230 aaPredicted RBP13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 TOP3BO95985 862 aaKnown RBP13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 VCPP55072 806 aaKnown RBP13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 OXCT1P55809 520 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 MRPS22P82650 360 aaKnown RBP13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 TMEM53Q6P2H8 277 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 POLNQ7Z5Q5 900 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 FAM81BQ96LP2 452 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 TELO2Q9Y4R8 837 aa13.62□□□□□ -0.23
GAPVD1-220ENST00000497580 A0A1B0GUL6 1792 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 EIF3DO15371 548 aaKnown RBP eCLIP13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 TLR3O15455 904 aaKnown RBP13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 CFLARO15519 480 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 E2F6O75461 281 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 CRTAMO95727 393 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 COL6A2P12110 1019 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 RFX1P22670 979 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 ADSSP30520 456 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 RXRGP48443 463 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 CLK2P49760 499 aaKnown RBP13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 GPSM2P81274 684 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 KLF1Q13351 362 aaPredicted RBP13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 MORF4L2Q15014 288 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 NANOGNBQ7Z5D8 188 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 NUP93Q8N1F7 819 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 DIS3LQ8TF46 1054 aaKnown RBP13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 ALKBH8Q96BT7 664 aaKnown RBP13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 NT5C1BQ96P26 610 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 COPS7BQ9H9Q2 264 aaPredicted RBP13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 AGTPBP1Q9UPW5 1226 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 PCNTO95613 3336 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 ARHGEF35A5YM69 484 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 LSM1O15116 133 aaKnown RBP13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 CD97P48960 835 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 HDAC4P56524 1084 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 HSF5Q4G112 596 aaPredicted RBP13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 LMBRD2Q68DH5 695 aaPredicted RBP13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 AAGABQ6PD74 315 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 ADGRD1Q6QNK2 874 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 MCOLN2Q8IZK6 566 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 PLEKHO2Q8TD55 490 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 FOXP3Q9BZS1 431 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 CAAP1Q9H8G2 361 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 RRN3Q9NYV6 651 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 SPATA7Q9P0W8 599 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 STRIP2Q9ULQ0 834 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 POMPQ9Y244 141 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 RBMX2Q9Y388 322 aaKnown RBP13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 TCRBV7S3A2A0A539 114 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 SLITRK3O94933 977 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 TGDSO95455 350 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 LDHCP07864 332 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 HOXD12P35452 270 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 DLGAP5Q15398 846 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 RNASEH2BQ5TBB1 312 aaKnown RBP13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 ATG16L1Q676U5 607 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 DNAJC14Q6Y2X3 702 aaPredicted RBP13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 RELL1Q8IUW5 271 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 LINC00116Q8NCU8 138 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms