RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ADMP35318 185 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 PSMB10P40306 273 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 EIF2DP41214 584 aaKnown RBP6.63□□□□□ -1.35
BRCA1-224ENST00000497488 RBM5P52756 815 aaKnown RBP eCLIP6.63□□□□□ -1.35
BRCA1-224ENST00000497488 PPP5CP53041 499 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 RARSP54136 660 aaKnown RBP6.63□□□□□ -1.35
BRCA1-224ENST00000497488 RAD23AP54725 363 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 WNT3AP56704 352 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 ANTXR2P58335 489 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 GNAI1P63096 354 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 TFCP2Q12800 502 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 TRIM28Q13263 835 aaKnown RBP6.63□□□□□ -1.35
BRCA1-224ENST00000497488 NFIXQ14938 502 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 RPS6KA2Q15349 733 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 PTPN14Q15678 1187 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 ODF2Q5BJF6 829 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 RINT1Q6NUQ1 792 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 INTS5Q6P9B9 1019 aaKnown RBP6.63□□□□□ -1.35
BRCA1-224ENST00000497488 SHISA2Q6UWI4 295 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 RAPH1Q70E73 1250 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 IKBIPQ70UQ0 350 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 C17orf53Q8N3J3 647 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-224ENST00000497488 ETNPPLQ8TBG4 499 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 RUFY2Q8WXA3 655 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 CASKIN2Q8WXE0 1202 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 CPT1BQ92523 772 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 STAMQ92783 540 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 ZNF764Q96H86 408 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-224ENST00000497488 MED15Q96RN5 788 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 MS4A7Q9GZW8 240 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-224ENST00000497488 SLC25A18Q9H1K4 315 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 IL21RQ9HBE5 538 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 ZBTB26Q9HCK0 441 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 POLR3BQ9NW08 1133 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-224ENST00000497488 HCFC1R1Q9NWW0 138 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 EIF2B4Q9UI10 523 aaKnown RBP6.63□□□□□ -1.35
BRCA1-224ENST00000497488 PLEKHM1Q9Y4G2 1056 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 ARAP1Q96P48 1450 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 NUP160Q12769 1436 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 LOC102723971A0A1B0GUV8 181 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 ZNF839A8K0R7 811 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 MYO1CO00159 1063 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 COQ9O75208 318 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 TBX10O75333 385 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 CHGBP05060 677 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 GRPP07492 148 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 CPA1P15085 419 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 FPR1P21462 350 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 SERPINA4P29622 427 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 SLC5A2P31639 672 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 KIR2DL1P43626 348 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-224ENST00000497488 KIR2DL2P43627 348 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-224ENST00000497488 HARS2P49590 506 aaKnown RBP6.62□□□□□ -1.35
BRCA1-224ENST00000497488 CPT1AP50416 773 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 RTP1P59025 263 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 AP1B1Q10567 949 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 AIMP1Q12904 312 aaKnown RBP6.62□□□□□ -1.35
BRCA1-224ENST00000497488 DCTN2Q13561 401 aaKnown RBP6.62□□□□□ -1.35
BRCA1-224ENST00000497488 COG2Q14746 738 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 KRTCAP3Q53RY4 240 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 BMP2KLQ5H9B9 411 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 KANK2Q63ZY3 851 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 FCRL6Q6DN72 434 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 CNSTQ6PJW8 725 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 ZAR1Q86SH2 424 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 CCDC170Q8IYT3 715 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 RTKN2Q8IZC4 609 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 ARMC10Q8N2F6 343 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-224ENST00000497488 LINC01599Q8WXQ3 324 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 UIMC1Q96RL1 719 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 HGH1Q9BTY7 390 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 CPEB1Q9BZB8 566 aaKnown RBP6.62□□□□□ -1.35
BRCA1-224ENST00000497488 KCNF1Q9H3M0 494 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 TSPY26PQ9H489 355 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 PDE7BQ9NP56 450 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 HSPBP1Q9NZL4 362 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 ADAMTS8Q9UP79 889 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 TBC1D30Q9Y2I9 924 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 ACTL7AQ9Y615 435 aa6.62□□□□□ -1.35
BRCA1-224ENST00000497488 KIF27Q86VH2 1401 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 FAM181BA6NEQ2 426 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 OR2W5A6NFC9 320 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 FAM90A20PA6NIJ5 464 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 EFCAB8A8MWE9 144 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 H0Y858 1186 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 GRM6O15303 877 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 ADAM20O43506 726 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 B3GALNT1O75752 331 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 AFPP02771 609 aaKnown RBP6.61□□□□□ -1.35
BRCA1-224ENST00000497488 ATP5BP06576 529 aaKnown RBP6.61□□□□□ -1.35
BRCA1-224ENST00000497488 GJB1P08034 283 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 SRGAP2BP0DMP2 458 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 IFNAR1P17181 557 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 TPH1P17752 444 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 TBXAS1P24557 533 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-224ENST00000497488 MXRA7P84157 204 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 CAMK1Q14012 370 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 ARHGEF7Q14155 803 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 GRM4Q14833 912 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms