RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 BBS12Q6ZW61 710 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 SLC4A11Q8NBS3 891 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 MAGEB5Q9BZ81 275 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 FOXP3Q9BZS1 431 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 VPS33BQ9H267 617 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 CXCL16Q9H2A7 254 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 SYNCQ9H7C4 482 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 DDX56Q9NY93 547 aaKnown RBP17.1■□□□□ 0.33
PCBP4-216ENST00000497390 HOXC10Q9NYD6 342 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 USH1CQ9Y6N9 552 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 GPR25O00155 361 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 UPP2O95045 317 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 RBP3P10745 1247 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 EIF3EP60228 445 aaKnown RBP17.1■□□□□ 0.33
PCBP4-216ENST00000497390 TMEM132AQ24JP5 1023 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 CDCA2Q69YH5 1023 aaPredicted RBP17.1■□□□□ 0.33
PCBP4-216ENST00000497390 CYP4V2Q6ZWL3 525 aaPredicted RBP17.1■□□□□ 0.33
PCBP4-216ENST00000497390 TTC8Q8TAM2 541 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 SPATA18Q8TC71 538 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 TBC1D10AQ9BXI6 508 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 PTPRHQ9HD43 1115 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 LOC285556D6RIA3 1793 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 C19orf81C9J6K1 198 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 H0Y3Z8 333 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 ITGB3P05106 788 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 CYP3A5P20815 502 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 NR1H3Q13133 447 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 GJC2Q5T442 439 aaPredicted RBP17.09■□□□□ 0.33
PCBP4-216ENST00000497390 MAP1SQ66K74 1059 aaPredicted RBP17.09■□□□□ 0.33
PCBP4-216ENST00000497390 ADGRD1Q6QNK2 874 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 NLRP9Q7RTR0 991 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 FAM13CQ8NE31 585 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 DNERQ8NFT8 737 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 KCNN1Q92952 543 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 GRAMD1AQ96CP6 724 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 ACSS3Q9H6R3 686 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 SMG5Q9UPR3 1016 aaKnown RBP17.09■□□□□ 0.33
PCBP4-216ENST00000497390 PTPRFP10586 1907 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 MYO18AQ92614 2054 aaKnown RBP17.09■□□□□ 0.33
PCBP4-216ENST00000497390 KBTBD13C9JR72 458 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 MICAL2O94851 1124 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 ARL4CP56559 192 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 IGBP1P78318 339 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 CCDC15Q0P6D6 951 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 KBTBD12Q3ZCT8 623 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 ATF7IP2Q5U623 682 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 RFWD3Q6PCD5 774 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 C1orf228Q6PIY5 440 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 CDHR3Q6ZTQ4 885 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 CCDC125Q86Z20 511 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 PALM2Q8IXS6 379 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 SEPT1Q8WYJ6 367 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 MIPEPQ99797 713 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 DHRS4Q9BTZ2 278 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 CDT1Q9H211 546 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 FBXO6Q9NRD1 293 aaPredicted RBP17.09■□□□□ 0.33
PCBP4-216ENST00000497390 RNF19AQ9NV58 838 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 SLC24A2Q9UI40 661 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 USP18Q9UMW8 372 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 NR2E3Q9Y5X4 410 aa17.09■□□□□ 0.33
PCBP4-216ENST00000497390 A0A0G2JND7 137 aa17.08■□□□□ 0.33
PCBP4-216ENST00000497390 M0QYV0 167 aa17.08■□□□□ 0.33
PCBP4-216ENST00000497390 ENTPD5O75356 428 aa17.08■□□□□ 0.33
PCBP4-216ENST00000497390 PROZP22891 400 aa17.08■□□□□ 0.33
PCBP4-216ENST00000497390 ABCD1P33897 745 aa17.08■□□□□ 0.33
PCBP4-216ENST00000497390 DPYSL3Q14195 570 aa17.08■□□□□ 0.33
PCBP4-216ENST00000497390 NAA25Q14CX7 972 aa17.08■□□□□ 0.33
PCBP4-216ENST00000497390 SETDB1Q15047 1291 aa17.08■□□□□ 0.33
PCBP4-216ENST00000497390 JADE1Q6IE81 842 aa17.08■□□□□ 0.33
PCBP4-216ENST00000497390 LBX2Q6XYB7 198 aa17.08■□□□□ 0.33
PCBP4-216ENST00000497390 RGS9BPQ6ZS82 235 aa17.08■□□□□ 0.33
PCBP4-216ENST00000497390 POLNQ7Z5Q5 900 aa17.08■□□□□ 0.33
PCBP4-216ENST00000497390 LONP2Q86WA8 852 aa17.08■□□□□ 0.33
PCBP4-216ENST00000497390 C12orf29Q8N999 325 aa17.08■□□□□ 0.33
PCBP4-216ENST00000497390 BANPQ8N9N5 519 aa17.08■□□□□ 0.33
PCBP4-216ENST00000497390 ATP11CQ8NB49 1132 aa17.08■□□□□ 0.33
PCBP4-216ENST00000497390 CPB2Q96IY4 423 aa17.08■□□□□ 0.33
PCBP4-216ENST00000497390 ZNF518BQ9C0D4 1074 aa17.08■□□□□ 0.33
PCBP4-216ENST00000497390 LRMDAQ9H2I8 198 aa17.08■□□□□ 0.33
PCBP4-216ENST00000497390 NOP53Q9NZM5 478 aaKnown RBP17.08■□□□□ 0.33
PCBP4-216ENST00000497390 TCRBV9S1A1TA0A576 114 aa17.08■□□□□ 0.32
PCBP4-216ENST00000497390 LACTBL1A8MY62 500 aa17.08■□□□□ 0.32
PCBP4-216ENST00000497390 E5RJQ4 531 aa17.08■□□□□ 0.32
PCBP4-216ENST00000497390 UGT1A9O60656 530 aa17.08■□□□□ 0.32
PCBP4-216ENST00000497390 CCND1P24385 295 aa17.08■□□□□ 0.32
PCBP4-216ENST00000497390 YWHAEP62258 255 aaKnown RBP17.08■□□□□ 0.32
PCBP4-216ENST00000497390 FAAP100Q0VG06 881 aa17.08■□□□□ 0.32
PCBP4-216ENST00000497390 CTC1Q2NKJ3 1217 aa17.08■□□□□ 0.32
PCBP4-216ENST00000497390 FAM102AQ5T9C2 384 aaPredicted RBP17.08■□□□□ 0.32
PCBP4-216ENST00000497390 MPZL3Q6UWV2 235 aa17.08■□□□□ 0.32
PCBP4-216ENST00000497390 TTC7BQ86TV6 843 aa17.08■□□□□ 0.32
PCBP4-216ENST00000497390 FBXO16Q8IX29 292 aaPredicted RBP17.08■□□□□ 0.32
PCBP4-216ENST00000497390 FGD4Q96M96 766 aa17.08■□□□□ 0.32
PCBP4-216ENST00000497390 FAM111AQ96PZ2 611 aa17.08■□□□□ 0.32
PCBP4-216ENST00000497390 GPR20Q99678 358 aa17.08■□□□□ 0.32
PCBP4-216ENST00000497390 PLCD4Q9BRC7 762 aa17.08■□□□□ 0.32
PCBP4-216ENST00000497390 ZNF395Q9H8N7 513 aaPredicted RBP17.08■□□□□ 0.32
PCBP4-216ENST00000497390 UGT1A7Q9HAW7 530 aa17.08■□□□□ 0.32
PCBP4-216ENST00000497390 UGT1A10Q9HAW8 530 aa17.08■□□□□ 0.32
PCBP4-216ENST00000497390 UGT1A8Q9HAW9 530 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms