RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 HPDP32754 393 aaPredicted RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 GUCY1A2P33402 732 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 KRT2P35908 639 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 PSMC2P35998 433 aaKnown RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 PSMB10P40306 273 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 PEX19P40855 299 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 GARSP41250 739 aaKnown RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 MSH2P43246 934 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 ZNF41P51814 821 aaPredicted RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 UBASH3AP57075 661 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 PCBP3P57721 371 aaKnown RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 ZNF200P98182 395 aaPredicted RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 MEF2AQ02078 507 aaPredicted RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 CALD1Q05682 793 aaKnown RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 BFSP1Q12934 665 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 PTP4A2Q12974 167 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 STK4Q13043 487 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 CHAF1BQ13112 559 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 SLC13A2Q13183 592 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 MTM1Q13496 603 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 NOLC1Q14978 699 aaKnown RBP eCLIP2.1□□□□□ -2.07
UBR4-217ENST00000497018 NOMO1Q15155 1222 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 PPA1Q15181 289 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 PTPN14Q15678 1187 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 UVSSAQ2YD98 709 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 C5orf22Q49AR2 442 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 PRAMEF14Q5SWL7 426 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 DCAF12L1Q5VU92 463 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 PRAMEF18Q5VWM3 479 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 FYB2Q5VWT5 728 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 STEAP3Q658P3 488 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 MCTP2Q6DN12 878 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 FCRL6Q6DN72 434 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 TMEM132EQ6IEE7 984 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 ANO7Q6IWH7 933 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 ALKBH5Q6P6C2 394 aaKnown RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 CNSTQ6PJW8 725 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 CRTC1Q6UUV9 634 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 ABRAXAS1Q6UWZ7 409 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 TMC5Q6UXY8 1006 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 RNF44Q7L0R7 432 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 NUP54Q7Z3B4 507 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 THAP5Q7Z6K1 395 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 ADGRA1Q86SQ6 560 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 GLRX5Q86SX6 157 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 RPAINQ86UA6 219 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 SLCO6A1Q86UG4 719 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 LCA5Q86VQ0 697 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 KRT73Q86Y46 540 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 UNC5CLQ8IV45 518 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 GLB1L2Q8IW92 636 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 CCDC28AQ8IWP9 274 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 RHOT2Q8IXI1 618 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 FMR1NBQ8N0W7 255 aaPredicted RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 SCML4Q8N228 414 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 MFSD4AQ8N468 514 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 LRRC71Q8N4P6 559 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 TTC39CQ8N584 583 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 SRBD1Q8N5C6 995 aaKnown RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 TMEM57Q8N5G2 664 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 LILRA3Q8N6C8 439 aaPredicted RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 USP38Q8NB14 1042 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 KCTD6Q8NC69 237 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 AGBL5Q8NDL9 886 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 CHST13Q8NET6 341 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 GPR150Q8NGU9 434 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 GATA6Q92908 595 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 KCNN1Q92952 543 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 IRF7Q92985 503 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 SYTL4Q96C24 671 aaPredicted RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 KTI12Q96EK9 354 aaPredicted RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 PERPQ96FX8 193 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 TOE1Q96GM8 510 aaKnown RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 TMX3Q96JJ7 454 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 BTBD6Q96KE9 485 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 NR1H4Q96RI1 486 aaPredicted RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 MED15Q96RN5 788 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 JMJD8Q96S16 334 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 HGH1Q9BTY7 390 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 G6PC3Q9BUM1 346 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 METTL22Q9BUU2 404 aaPredicted RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 C1orf43Q9BWL3 253 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 CDADC1Q9BWV3 514 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 IRX2Q9BZI1 471 aaPredicted RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 MCOLN1Q9GZU1 580 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 PCDHAC1Q9H158 963 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 SIL1Q9H173 461 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 NELFAQ9H3P2 528 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 TSPY26PQ9H489 355 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 ERVMER34-1Q9H9K5 563 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 GRPEL1Q9HAV7 217 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 IL21RQ9HBE5 538 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 CNNM1Q9NRU3 951 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 SEPT11Q9NVA2 429 aaKnown RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 BTG4Q9NY30 223 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 NOP53Q9NZM5 478 aaKnown RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 ZNF212Q9UDV6 495 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 ZC3H7BQ9UGR2 993 aaKnown RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 SRRDQ9UH36 339 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 MID2Q9UJV3 735 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms