RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ZNF571Q7Z3V5 609 aaPredicted RBP23■■□□□ 1.27
C9orf3-222ENST00000496567 TMEM35BQ8NCS4 154 aa23■■□□□ 1.27
C9orf3-222ENST00000496567 SECISBP2LQ93073 1101 aaKnown RBP23■■□□□ 1.27
C9orf3-222ENST00000496567 SPATA17Q96L03 361 aa23■■□□□ 1.27
C9orf3-222ENST00000496567 TMEM30AQ9NV96 361 aa23■■□□□ 1.27
C9orf3-222ENST00000496567 SEPT11Q9NVA2 429 aaKnown RBP23■■□□□ 1.27
C9orf3-222ENST00000496567 ZDHHC7Q9NXF8 308 aa23■■□□□ 1.27
C9orf3-222ENST00000496567 MYH10P35580 1976 aa22.99■■□□□ 1.27
C9orf3-222ENST00000496567 SOAT2O75908 522 aa22.99■■□□□ 1.27
C9orf3-222ENST00000496567 BEST1O76090 585 aa22.99■■□□□ 1.27
C9orf3-222ENST00000496567 HNRNPA1P09651 372 aaKnown RBP eCLIP22.99■■□□□ 1.27
C9orf3-222ENST00000496567 EPHB3P54753 998 aa22.99■■□□□ 1.27
C9orf3-222ENST00000496567 TWF1Q12792 350 aa22.99■■□□□ 1.27
C9orf3-222ENST00000496567 VEPH1Q14D04 833 aa22.99■■□□□ 1.27
C9orf3-222ENST00000496567 PASD1Q8IV76 773 aa22.99■■□□□ 1.27
C9orf3-222ENST00000496567 ZMIZ2Q8NF64 920 aa22.99■■□□□ 1.27
C9orf3-222ENST00000496567 VN1R2Q8NFZ6 395 aa22.99■■□□□ 1.27
C9orf3-222ENST00000496567 NOX5Q96PH1 765 aa22.99■■□□□ 1.27
C9orf3-222ENST00000496567 SYT11Q9BT88 431 aa22.99■■□□□ 1.27
C9orf3-222ENST00000496567 ARHGAP20Q9P2F6 1191 aa22.99■■□□□ 1.27
C9orf3-222ENST00000496567 CDH5P33151 784 aaPredicted RBP22.98■■□□□ 1.27
C9orf3-222ENST00000496567 PLA2G4AP47712 749 aa22.98■■□□□ 1.27
C9orf3-222ENST00000496567 CCDC186Q7Z3E2 898 aa22.98■■□□□ 1.27
C9orf3-222ENST00000496567 ELMOD1Q8N336 334 aa22.98■■□□□ 1.27
C9orf3-222ENST00000496567 STK32AQ8WU08 396 aa22.98■■□□□ 1.27
C9orf3-222ENST00000496567 SLC35F5Q8WV83 523 aa22.98■■□□□ 1.27
C9orf3-222ENST00000496567 PDLIM2Q96JY6 352 aa22.98■■□□□ 1.27
C9orf3-222ENST00000496567 SFXN1Q9H9B4 322 aa22.98■■□□□ 1.27
C9orf3-222ENST00000496567 ASB3Q9Y575 518 aa22.98■■□□□ 1.27
C9orf3-222ENST00000496567 SSU72P8A0A1W2PR75 194 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 GLP2RO95838 553 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 ATF6P18850 670 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 GPR15P49685 360 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 RBM10P98175 930 aaKnown RBP22.97■■□□□ 1.27
C9orf3-222ENST00000496567 ITIH5Q86UX2 942 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 HSFY1Q96LI6 401 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 SZT2Q5T011 3432 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 LINC01565O15544 149 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 XYLBO75191 536 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 CYP1A1P04798 512 aaPredicted RBP22.97■■□□□ 1.27
C9orf3-222ENST00000496567 PLEKP08567 350 aaPredicted RBP22.97■■□□□ 1.27
C9orf3-222ENST00000496567 CSH1P0DML2 217 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 CSH2P0DML3 217 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 MAPK8IP2Q13387 824 aaPredicted RBP22.97■■□□□ 1.27
C9orf3-222ENST00000496567 COL19A1Q14993 1142 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 CTC1Q2NKJ3 1217 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 CYP26C1Q6V0L0 522 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 DENND5BQ6ZUT9 1274 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 PIGZQ86VD9 579 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 NUP93Q8N1F7 819 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.97■■□□□ 1.27
C9orf3-222ENST00000496567 DEF6Q9H4E7 631 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 CLDND1Q9NY35 253 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 EHD2Q9NZN4 543 aa22.97■■□□□ 1.27
C9orf3-222ENST00000496567 RFPL2O75678 378 aa22.96■■□□□ 1.27
C9orf3-222ENST00000496567 POU2F2P09086 479 aa22.96■■□□□ 1.27
C9orf3-222ENST00000496567 HOXB8P17481 243 aaPredicted RBP22.96■■□□□ 1.27
C9orf3-222ENST00000496567 EIF4A3P38919 411 aaKnown RBP22.96■■□□□ 1.27
C9orf3-222ENST00000496567 SNX16P57768 344 aa22.96■■□□□ 1.27
C9orf3-222ENST00000496567 NOMO3P69849 1222 aa22.96■■□□□ 1.27
C9orf3-222ENST00000496567 TAF12Q16514 161 aa22.96■■□□□ 1.27
C9orf3-222ENST00000496567 CLEC16AQ2KHT3 1053 aa22.96■■□□□ 1.27
C9orf3-222ENST00000496567 SDHAF4Q5VUM1 108 aa22.96■■□□□ 1.27
C9orf3-222ENST00000496567 PPP1R2P3Q6NXS1 205 aa22.96■■□□□ 1.27
C9orf3-222ENST00000496567 ANKRD54Q6NXT1 300 aa22.96■■□□□ 1.27
C9orf3-222ENST00000496567 PMF1Q6P1K2 205 aa22.96■■□□□ 1.27
C9orf3-222ENST00000496567 WDTC1Q8N5D0 677 aa22.96■■□□□ 1.27
C9orf3-222ENST00000496567 C1orf131Q8NDD1 294 aaKnown RBP22.96■■□□□ 1.27
C9orf3-222ENST00000496567 CMASQ8NFW8 434 aaPredicted RBP22.96■■□□□ 1.27
C9orf3-222ENST00000496567 GIPC2Q8TF65 315 aa22.96■■□□□ 1.27
C9orf3-222ENST00000496567 KCTD13Q8WZ19 329 aa22.96■■□□□ 1.27
C9orf3-222ENST00000496567 PABPC5Q96DU9 382 aaKnown RBP22.96■■□□□ 1.27
C9orf3-222ENST00000496567 CCDC42Q96M95 316 aa22.96■■□□□ 1.27
C9orf3-222ENST00000496567 ZNF512Q96ME7 567 aaPredicted RBP22.96■■□□□ 1.27
C9orf3-222ENST00000496567 PCDHB18PQ96TA0 734 aa22.96■■□□□ 1.27
C9orf3-222ENST00000496567 CHP1Q99653 195 aa22.96■■□□□ 1.27
C9orf3-222ENST00000496567 CYLDQ9NQC7 956 aa22.96■■□□□ 1.27
C9orf3-222ENST00000496567 CCDC195A0A1B0GUA6 201 aa22.95■■□□□ 1.26
C9orf3-222ENST00000496567 HHLA1C9JL84 531 aa22.95■■□□□ 1.26
C9orf3-222ENST00000496567 TULP2O00295 520 aa22.95■■□□□ 1.26
C9orf3-222ENST00000496567 RTN3O95197 1032 aaPredicted RBP22.95■■□□□ 1.26
C9orf3-222ENST00000496567 FECHP22830 423 aa22.95■■□□□ 1.26
C9orf3-222ENST00000496567 ACADSBP45954 432 aa22.95■■□□□ 1.26
C9orf3-222ENST00000496567 PDCLQ13371 301 aa22.95■■□□□ 1.26
C9orf3-222ENST00000496567 TMTC1Q8IUR5 882 aa22.95■■□□□ 1.26
C9orf3-222ENST00000496567 MSANTD4Q8NCY6 345 aa22.95■■□□□ 1.26
C9orf3-222ENST00000496567 GPR152Q8TDT2 470 aa22.95■■□□□ 1.26
C9orf3-222ENST00000496567 PSMG2Q969U7 264 aa22.95■■□□□ 1.26
C9orf3-222ENST00000496567 PRKD2Q9BZL6 878 aa22.95■■□□□ 1.26
C9orf3-222ENST00000496567 NHEJ1Q9H9Q4 299 aaPredicted RBP22.95■■□□□ 1.26
C9orf3-222ENST00000496567 LRRC4Q9HBW1 653 aa22.95■■□□□ 1.26
C9orf3-222ENST00000496567 ST7Q9NRC1 585 aa22.95■■□□□ 1.26
C9orf3-222ENST00000496567 COMMD8Q9NX08 183 aa22.95■■□□□ 1.26
C9orf3-222ENST00000496567 ADAMTS1Q9UHI8 967 aa22.95■■□□□ 1.26
C9orf3-222ENST00000496567 SLC38A8A6NNN8 435 aa22.94■■□□□ 1.26
C9orf3-222ENST00000496567 TNFRSF10BO14763 440 aa22.94■■□□□ 1.26
C9orf3-222ENST00000496567 CCL16O15467 120 aa22.94■■□□□ 1.26
C9orf3-222ENST00000496567 PAPLNO95428 1278 aa22.94■■□□□ 1.26
C9orf3-222ENST00000496567 UNGP13051 313 aaPredicted RBP22.94■■□□□ 1.26
C9orf3-222ENST00000496567 SLC5A3P53794 718 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms