RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 LAMA2P24043 3122 aaKnown RBP12.92□□□□□ -0.34
PDE6B-212ENST00000496514 ASB14A6NK59 587 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 DNALI1O14645 258 aaPredicted RBP12.92□□□□□ -0.34
PDE6B-212ENST00000496514 KDELR1P24390 212 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 GPD2P43304 727 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 HIC1Q14526 733 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 RSAD2Q8WXG1 361 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 UPF1Q92900 1129 aaKnown RBP eCLIP12.92□□□□□ -0.34
PDE6B-212ENST00000496514 ABCF3Q9NUQ8 709 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 HAUS2Q9NVX0 235 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 PIH1D1Q9NWS0 290 aaKnown RBP12.92□□□□□ -0.34
PDE6B-212ENST00000496514 USP18Q9UMW8 372 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 SBF1O95248 1867 aa12.91□□□□□ -0.34
PDE6B-212ENST00000496514 C3orf70A6NLC5 250 aaPredicted RBP12.91□□□□□ -0.34
PDE6B-212ENST00000496514 CCDC130P13994 396 aa12.91□□□□□ -0.34
PDE6B-212ENST00000496514 AP3M2P53677 418 aa12.91□□□□□ -0.34
PDE6B-212ENST00000496514 MYO1EQ12965 1108 aa12.91□□□□□ -0.34
PDE6B-212ENST00000496514 CXorf38Q8TB03 319 aa12.91□□□□□ -0.34
PDE6B-212ENST00000496514 SLCO2A1Q92959 643 aa12.91□□□□□ -0.34
PDE6B-212ENST00000496514 CNOT10Q9H9A5 744 aaKnown RBP12.91□□□□□ -0.34
PDE6B-212ENST00000496514 TPX2Q9ULW0 747 aaKnown RBP12.91□□□□□ -0.34
PDE6B-212ENST00000496514 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.91□□□□□ -0.34
PDE6B-212ENST00000496514 SIGLEC16A6NMB1 481 aa12.91□□□□□ -0.34
PDE6B-212ENST00000496514 LSM8O95777 96 aaKnown RBP12.91□□□□□ -0.34
PDE6B-212ENST00000496514 LAMC2Q13753 1193 aa12.91□□□□□ -0.34
PDE6B-212ENST00000496514 ZNF792Q3KQV3 632 aa12.91□□□□□ -0.34
PDE6B-212ENST00000496514 KCNV1Q6PIU1 500 aa12.91□□□□□ -0.34
PDE6B-212ENST00000496514 GPR142Q7Z601 462 aa12.91□□□□□ -0.34
PDE6B-212ENST00000496514 CTU1Q7Z7A3 348 aaKnown RBP12.91□□□□□ -0.34
PDE6B-212ENST00000496514 SPATA18Q8TC71 538 aa12.91□□□□□ -0.34
PDE6B-212ENST00000496514 TMEM40Q8WWA1 233 aa12.91□□□□□ -0.34
PDE6B-212ENST00000496514 TMPRSS4Q9NRS4 437 aa12.91□□□□□ -0.34
PDE6B-212ENST00000496514 CHMP2BQ9UQN3 213 aa12.91□□□□□ -0.34
PDE6B-212ENST00000496514 RNF8O76064 485 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 TMEM63AO94886 807 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 RBP3P10745 1247 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 LCP1P13796 627 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 LMO2P25791 158 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 GBP1P32455 592 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 STX2P32856 288 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 RPL22P35268 128 aaKnown RBP12.9□□□□□ -0.34
PDE6B-212ENST00000496514 EIF3EP60228 445 aaKnown RBP12.9□□□□□ -0.34
PDE6B-212ENST00000496514 GRM1Q13255 1194 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 OASLQ15646 514 aaKnown RBP12.9□□□□□ -0.34
PDE6B-212ENST00000496514 GPR162Q16538 588 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 CCL14Q16627 93 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 DNAJB3Q8WWF6 145 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 BCO2Q9BYV7 579 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 TRIM6Q9C030 488 aaPredicted RBP12.9□□□□□ -0.34
PDE6B-212ENST00000496514 PCDHGC3Q9UN70 934 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 H7C0C1 242 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 NEBLO76041 1014 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 ATP5OP48047 213 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 MNAT1P51948 309 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 SURF1Q15526 300 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 TAOK1Q7L7X3 1001 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 TTC30AQ86WT1 665 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 PTPN18Q99952 460 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 MFHAS1Q9Y4C4 1052 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 A6NNZ2 444 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 MED7O43513 233 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 KIF1CO43896 1103 aaKnown RBP12.9□□□□□ -0.34
PDE6B-212ENST00000496514 ACAT1P24752 427 aaKnown RBP12.9□□□□□ -0.34
PDE6B-212ENST00000496514 GCAP28676 217 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 MAN1A1P33908 653 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 TUBB8Q3ZCM7 444 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 DARS2Q6PI48 645 aaKnown RBP12.9□□□□□ -0.34
PDE6B-212ENST00000496514 C6orf89Q6UWU4 347 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 MICALCLQ6ZW33 695 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 CCDC125Q86Z20 511 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 CCDC197Q8NCU1 140 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 WDR83Q9BRX9 315 aaKnown RBP12.9□□□□□ -0.34
PDE6B-212ENST00000496514 CEP41Q9BYV8 373 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 SLCO1B3Q9NPD5 702 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 IRAK4Q9NWZ3 460 aa12.9□□□□□ -0.34
PDE6B-212ENST00000496514 MMP3P08254 477 aa12.89□□□□□ -0.35
PDE6B-212ENST00000496514 HADHQ16836 314 aaKnown RBP12.89□□□□□ -0.35
PDE6B-212ENST00000496514 RNASEH2BQ5TBB1 312 aaKnown RBP12.89□□□□□ -0.35
PDE6B-212ENST00000496514 IGDCC3Q8IVU1 814 aa12.89□□□□□ -0.35
PDE6B-212ENST00000496514 ZCCHC9Q8N567 271 aaKnown RBP12.89□□□□□ -0.35
PDE6B-212ENST00000496514 CPT1BQ92523 772 aa12.89□□□□□ -0.35
PDE6B-212ENST00000496514 MYO18AQ92614 2054 aaKnown RBP12.89□□□□□ -0.35
PDE6B-212ENST00000496514 GAS2O43903 313 aaKnown RBP12.89□□□□□ -0.35
PDE6B-212ENST00000496514 IL18RAPO95256 599 aa12.89□□□□□ -0.35
PDE6B-212ENST00000496514 PFKMP08237 780 aa12.89□□□□□ -0.35
PDE6B-212ENST00000496514 MCF2P10911 925 aa12.89□□□□□ -0.35
PDE6B-212ENST00000496514 DNAJC3Q13217 504 aa12.89□□□□□ -0.35
PDE6B-212ENST00000496514 ZNF484Q5JVG2 852 aa12.89□□□□□ -0.35
PDE6B-212ENST00000496514 NAIF1Q69YI7 327 aaPredicted RBP12.89□□□□□ -0.35
PDE6B-212ENST00000496514 MS4A4AQ96JQ5 239 aa12.89□□□□□ -0.35
PDE6B-212ENST00000496514 TGS1Q96RS0 853 aaKnown RBP12.89□□□□□ -0.35
PDE6B-212ENST00000496514 MAK16Q9BXY0 300 aaKnown RBP12.89□□□□□ -0.35
PDE6B-212ENST00000496514 SAMD15Q9P1V8 674 aa12.89□□□□□ -0.35
PDE6B-212ENST00000496514 STRIP2Q9ULQ0 834 aa12.89□□□□□ -0.35
PDE6B-212ENST00000496514 PIN4Q9Y237 131 aaKnown RBP12.89□□□□□ -0.35
PDE6B-212ENST00000496514 ANK1P16157 1881 aa12.89□□□□□ -0.35
PDE6B-212ENST00000496514 MEIS3P2A8K0S8 358 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 GABBR2O75899 941 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 TRUB2O95900 331 aaKnown RBP12.88□□□□□ -0.35
PDE6B-212ENST00000496514 PAEPP09466 180 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms