RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 PHACTR2O75167 634 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 RHOBTB3O94955 611 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 PTPN1P18031 435 aaKnown RBP15.22■□□□□ 0.03
VTI1A-209ENST00000496445 CDH8P55286 799 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 FAM160A1Q05DH4 1040 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 RUNX3Q13761 415 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 NCOA4Q13772 614 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 MTF1Q14872 753 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 ZNF699Q32M78 642 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 C1orf220Q5T0J3 134 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 SCARA5Q6ZMJ2 495 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 KRBA2Q6ZNG9 492 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 SPEM1Q8N4L4 309 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 DCLK2Q8N568 766 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 ARL14EPQ8N8R7 260 aaPredicted RBP15.22■□□□□ 0.03
VTI1A-209ENST00000496445 B3GALNT2Q8NCR0 500 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 ATRIPQ8WXE1 791 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 CEP295NLQ96MC4 621 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 B3GNT5Q9BYG0 378 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 SDCBP2Q9H190 292 aa15.22■□□□□ 0.03
VTI1A-209ENST00000496445 A8MXQ7 604 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 K7ESF4 209 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 CLDN5O00501 218 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 PAPSS2O95340 614 aaPredicted RBP15.21■□□□□ 0.03
VTI1A-209ENST00000496445 CKMP06732 381 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 USP17L7P0C7H9 530 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 ANXA13P27216 316 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 HOXC13P31276 330 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 AP3M2P53677 418 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 NOP14P78316 857 aaKnown RBP15.21■□□□□ 0.03
VTI1A-209ENST00000496445 ZXDBP98169 803 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 DMWDQ09019 674 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 ZACNQ401N2 412 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 DGKKQ5KSL6 1271 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 NAIF1Q69YI7 327 aaPredicted RBP15.21■□□□□ 0.03
VTI1A-209ENST00000496445 OSCP1Q8WVF1 389 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 RUBCNQ92622 972 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 C8orf48Q96LL4 319 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 FAM126AQ9BYI3 521 aaPredicted RBP15.21■□□□□ 0.03
VTI1A-209ENST00000496445 ELOVL4Q9GZR5 314 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 SCAND2PQ9GZW5 306 aaPredicted RBP15.21■□□□□ 0.03
VTI1A-209ENST00000496445 SMG5Q9UPR3 1016 aaKnown RBP15.21■□□□□ 0.03
VTI1A-209ENST00000496445 TRAF3IP3Q9Y228 551 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 ATP6V1DQ9Y5K8 247 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 MYH10P35580 1976 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 EML5Q05BV3 1969 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 ATG2BQ96BY7 2078 aa15.21■□□□□ 0.03
VTI1A-209ENST00000496445 CALUO43852 315 aaPredicted RBP15.2■□□□□ 0.02
VTI1A-209ENST00000496445 TCF3P15923 654 aa15.2■□□□□ 0.02
VTI1A-209ENST00000496445 CXCL12P48061 93 aa15.2■□□□□ 0.02
VTI1A-209ENST00000496445 PDGFRLQ15198 375 aa15.2■□□□□ 0.02
VTI1A-209ENST00000496445 NFIL3Q16649 462 aa15.2■□□□□ 0.02
VTI1A-209ENST00000496445 ZNF667Q5HYK9 610 aa15.2■□□□□ 0.02
VTI1A-209ENST00000496445 TMEM196Q5HYL7 178 aa15.2■□□□□ 0.02
VTI1A-209ENST00000496445 CEP135Q66GS9 1140 aa15.2■□□□□ 0.02
VTI1A-209ENST00000496445 FSTL4Q6MZW2 842 aa15.2■□□□□ 0.02
VTI1A-209ENST00000496445 PKN3Q6P5Z2 889 aa15.2■□□□□ 0.02
VTI1A-209ENST00000496445 PAQR9Q6ZVX9 377 aa15.2■□□□□ 0.02
VTI1A-209ENST00000496445 HINFPQ9BQA5 517 aa15.2■□□□□ 0.02
VTI1A-209ENST00000496445 HMGXB4Q9UGU5 601 aa15.2■□□□□ 0.02
VTI1A-209ENST00000496445 ARHGAP26Q9UNA1 814 aa15.2■□□□□ 0.02
VTI1A-209ENST00000496445 MAPK8IP1Q9UQF2 711 aa15.2■□□□□ 0.02
VTI1A-209ENST00000496445 WNT6Q9Y6F9 365 aa15.2■□□□□ 0.02
VTI1A-209ENST00000496445 ZNF840PA6NDX5 716 aa15.19■□□□□ 0.02
VTI1A-209ENST00000496445 TRDMT1O14717 391 aaKnown RBP15.19■□□□□ 0.02
VTI1A-209ENST00000496445 AKAP3O75969 853 aa15.19■□□□□ 0.02
VTI1A-209ENST00000496445 ZNF202O95125 648 aa15.19■□□□□ 0.02
VTI1A-209ENST00000496445 OLFM2O95897 454 aa15.19■□□□□ 0.02
VTI1A-209ENST00000496445 GJA4P35212 333 aa15.19■□□□□ 0.02
VTI1A-209ENST00000496445 ASPAP45381 313 aa15.19■□□□□ 0.02
VTI1A-209ENST00000496445 KCNB1Q14721 858 aa15.19■□□□□ 0.02
VTI1A-209ENST00000496445 PPP2R5DQ14738 602 aa15.19■□□□□ 0.02
VTI1A-209ENST00000496445 EML3Q32P44 896 aa15.19■□□□□ 0.02
VTI1A-209ENST00000496445 ZCWPW2Q504Y3 356 aa15.19■□□□□ 0.02
VTI1A-209ENST00000496445 SPOPLQ6IQ16 392 aa15.19■□□□□ 0.02
VTI1A-209ENST00000496445 CC2D1AQ6P1N0 951 aaPredicted RBP15.19■□□□□ 0.02
VTI1A-209ENST00000496445 SV2AQ7L0J3 742 aa15.19■□□□□ 0.02
VTI1A-209ENST00000496445 FAM35AQ86V20 835 aa15.19■□□□□ 0.02
VTI1A-209ENST00000496445 KIAA2013Q8IYS2 634 aa15.19■□□□□ 0.02
VTI1A-209ENST00000496445 SYNPOQ8N3V7 929 aa15.19■□□□□ 0.02
VTI1A-209ENST00000496445 TMC2Q8TDI7 906 aa15.19■□□□□ 0.02
VTI1A-209ENST00000496445 SH3RF2Q8TEC5 729 aa15.19■□□□□ 0.02
VTI1A-209ENST00000496445 ECT2Q9H8V3 914 aa15.19■□□□□ 0.02
VTI1A-209ENST00000496445 FBRSL1Q9HCM7 1045 aaKnown RBP15.19■□□□□ 0.02
VTI1A-209ENST00000496445 DUS2Q9NX74 493 aaKnown RBP15.19■□□□□ 0.02
VTI1A-209ENST00000496445 TRPM5Q9NZQ8 1165 aa15.19■□□□□ 0.02
VTI1A-209ENST00000496445 MAPK13O15264 365 aa15.18■□□□□ 0.02
VTI1A-209ENST00000496445 CLSTN1O94985 981 aa15.18■□□□□ 0.02
VTI1A-209ENST00000496445 ASS1P00966 412 aaKnown RBP15.18■□□□□ 0.02
VTI1A-209ENST00000496445 OAS1P00973 400 aaKnown RBP15.18■□□□□ 0.02
VTI1A-209ENST00000496445 EGFP01133 1207 aa15.18■□□□□ 0.02
VTI1A-209ENST00000496445 TRIM49P0CI25 452 aa15.18■□□□□ 0.02
VTI1A-209ENST00000496445 TRIM49CP0CI26 452 aa15.18■□□□□ 0.02
VTI1A-209ENST00000496445 HDCP19113 662 aa15.18■□□□□ 0.02
VTI1A-209ENST00000496445 NR2F2P24468 414 aa15.18■□□□□ 0.02
VTI1A-209ENST00000496445 NRLP54845 237 aa15.18■□□□□ 0.02
VTI1A-209ENST00000496445 IFRD2Q12894 506 aaPredicted RBP15.18■□□□□ 0.02
VTI1A-209ENST00000496445 TAF10Q12962 218 aa15.18■□□□□ 0.02
VTI1A-209ENST00000496445 ORC1Q13415 861 aa15.18■□□□□ 0.02
VTI1A-209ENST00000496445 SMYD4Q8IYR2 804 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms