RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 FARP1Q9Y4F1 1045 aaPredicted RBP11.61□□□□□ -0.55
CMSS1-208ENST00000496116 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.61□□□□□ -0.55
CMSS1-208ENST00000496116 CCT8L1PA6NM43 557 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 TCP11X1B4DZS4 312 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 MMP3P08254 477 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 SNX16P57768 344 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 DUSP28Q4G0W2 176 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 FAM47CQ5HY64 1035 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 MAP1SQ66K74 1059 aaPredicted RBP11.6□□□□□ -0.55
CMSS1-208ENST00000496116 OR6B2Q6IFH4 312 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 CKAP2Q8WWK9 683 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 SAE1Q9UBE0 346 aaPredicted RBP11.6□□□□□ -0.55
CMSS1-208ENST00000496116 CCL15-CCL14A0A0B4J2E2 113 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.6□□□□□ -0.55
CMSS1-208ENST00000496116 FAM47DPA6NHR8 397 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 RRN3P2A6NIE6 340 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 PRPSAP2O60256 369 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 SNAI1O95863 264 aaPredicted RBP11.6□□□□□ -0.55
CMSS1-208ENST00000496116 CD48P09326 243 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 PDGFRAP16234 1089 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 STIP1P31948 543 aaKnown RBP11.6□□□□□ -0.55
CMSS1-208ENST00000496116 YARSP54577 528 aaKnown RBP11.6□□□□□ -0.55
CMSS1-208ENST00000496116 EIF3EP60228 445 aaKnown RBP11.6□□□□□ -0.55
CMSS1-208ENST00000496116 CCL15Q16663 113 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 CCDC142Q17RM4 750 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 MAP7D3Q8IWC1 876 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 TMEM130Q8N3G9 435 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 OR6J1Q8NGC5 347 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 MAGEB18Q96M61 343 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 ABHD16BQ9H3Z7 469 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 MORF4L1Q9UBU8 362 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 SLC24A2Q9UI40 661 aa11.6□□□□□ -0.55
CMSS1-208ENST00000496116 IQCA1LA6NCM1 817 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 C2CD4BA6NLJ0 364 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 BTBD19C9JJ37 291 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 E5RJQ4 531 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 POC1B-GALNT4F8VUJ3 575 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 SNX3O60493 162 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 RBP3P10745 1247 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 HOXD8P13378 290 aaPredicted RBP11.59□□□□□ -0.55
CMSS1-208ENST00000496116 SMPD1P17405 629 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 KRT15P19012 456 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 GDF10P55107 478 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 CDH6P55285 790 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 IL9RQ01113 521 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 TFDP2Q14188 446 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 FASTKD3Q14CZ7 662 aaKnown RBP11.59□□□□□ -0.55
CMSS1-208ENST00000496116 RASA2Q15283 850 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 PCBP1Q15365 356 aaKnown RBP eCLIP11.59□□□□□ -0.55
CMSS1-208ENST00000496116 MARCH8Q5T0T0 291 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 NUGGCQ68CJ6 796 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 FAM183BPQ6ZVS7 135 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 GPR142Q7Z601 462 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 TRABD2AQ86V40 505 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 ATP11CQ8NB49 1132 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 GDAP1Q8TB36 358 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 SPATA18Q8TC71 538 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.59□□□□□ -0.55
CMSS1-208ENST00000496116 PYROXD1Q8WU10 500 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 RXFP2Q8WXD0 754 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 CPT1BQ92523 772 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 MAML1Q92585 1016 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 KAT2BQ92831 832 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 PLCD4Q9BRC7 762 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 GCOM2Q9BZD3 368 aaPredicted RBP11.59□□□□□ -0.55
CMSS1-208ENST00000496116 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.59□□□□□ -0.55
CMSS1-208ENST00000496116 RALGAPA2Q2PPJ7 1873 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 GOLGA8MH3BSY2 632 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 SUN1O94901 812 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 ENDOD1O94919 500 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 NPTXRO95502 500 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 SETSIPP0DME0 302 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 ATP2A2P16615 1042 aaKnown RBP11.59□□□□□ -0.55
CMSS1-208ENST00000496116 YBX3P16989 372 aaKnown RBP eCLIP11.59□□□□□ -0.55
CMSS1-208ENST00000496116 RPL22P35268 128 aaKnown RBP11.59□□□□□ -0.55
CMSS1-208ENST00000496116 PSMC4P43686 418 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 SCTRP47872 440 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 GOLGA7BQ2TAP0 167 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 HP1BP3Q5SSJ5 553 aaPredicted RBP11.59□□□□□ -0.55
CMSS1-208ENST00000496116 FBXW10Q5XX13 1052 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 IQSEC1Q6DN90 963 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 CHADLQ6NUI6 762 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 SLC27A1Q6PCB7 646 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 ANKRD23Q86SG2 305 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 PNMA8AQ86V59 439 aaPredicted RBP11.59□□□□□ -0.55
CMSS1-208ENST00000496116 PDIK1LQ8N165 341 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 NAT8LQ8N9F0 302 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 BEST2Q8NFU1 509 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 MAML3Q96JK9 1138 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 TGS1Q96RS0 853 aaKnown RBP11.59□□□□□ -0.55
CMSS1-208ENST00000496116 SMC6Q96SB8 1091 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 NCAPGQ9BPX3 1015 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 ZNF408Q9H9D4 720 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 GBA2Q9HCG7 927 aaPredicted RBP11.59□□□□□ -0.55
CMSS1-208ENST00000496116 MLXIPLQ9NP71 852 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 FGFR1OP2Q9NVK5 253 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 PSMC3IPQ9P2W1 217 aaPredicted RBP11.59□□□□□ -0.55
CMSS1-208ENST00000496116 HESX1Q9UBX0 185 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 FETUBQ9UGM5 382 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 SMG5Q9UPR3 1016 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms