RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 GRAMD1AQ96CP6 724 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 MS4A4AQ96JQ5 239 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 LRRC37BQ96QE4 947 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 TRABDQ9H4I3 376 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 VPS37BQ9H9H4 285 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 SNTG2Q9NY99 539 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 EURLQ9NYK6 297 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 DNPEPQ9ULA0 475 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 CHKBQ9Y259 395 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 ASB14A6NK59 587 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 MYBL1P10243 752 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 KLRC2P26717 231 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 GCAP28676 217 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 PSMC1P62191 440 aaKnown RBP9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 CCNA1P78396 465 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 MCL1Q07820 350 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 CCDC142Q17RM4 750 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 PLPPR4Q7Z2D5 763 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 ZCCHC9Q8N567 271 aaKnown RBP9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 FEZF2Q8TBJ5 459 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 HSPH1Q92598 858 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 C18orf25Q96B23 403 aaPredicted RBP9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 KIF12Q96FN5 646 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 CFAP57Q96MR6 1250 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 TRIM6Q9C030 488 aaPredicted RBP9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 XYLT2Q9H1B5 865 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 GOLGA2P5Q9HBQ8 144 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 TXLNGQ9NUQ3 528 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 ACTL7BQ9Y614 415 aa9.54□□□□□ -0.88
TM9SF4-207ENST00000495749 PSTPIP1O43586 416 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 NPTXRO95502 500 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 CD48P09326 243 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 CA4P22748 312 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 RPA3P35244 121 aaPredicted RBP9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 ASPAP45381 313 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 PHKA2P46019 1235 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 ARSEP51690 589 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 RABGGTBP53611 331 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 CLDN10P78369 228 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 ACVR2BQ13705 512 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 SPARCL1Q14515 664 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 GRIK4Q16099 956 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 PTPN20Q4JDL3 420 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 LDLRAD1Q5T700 205 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 SCYL2Q6P3W7 929 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 TRIM11Q96F44 468 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 FAXDC2Q96IV6 333 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 PIWIL1Q96J94 861 aaKnown RBP9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 CPXM1Q96SM3 734 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 C16orf70Q9BSU1 422 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 EIF2AQ9BY44 585 aaKnown RBP9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 FZD8Q9H461 694 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 GBA2Q9HCG7 927 aaPredicted RBP9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 SLC5A4Q9NY91 659 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 NKX1-2Q9UD57 310 aaPredicted RBP9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 GRID1Q9ULK0 1009 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 SNX9Q9Y5X1 595 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 M0QYV0 167 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 CLGNO14967 610 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 ZC3H11AO75152 810 aaKnown RBP eCLIP9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 LGR5O75473 907 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 BANF1O75531 89 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 PIGRP01833 764 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 PECAM1P16284 738 aaPredicted RBP9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 TBXAS1P24557 533 aaPredicted RBP9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 IGFBP6P24592 240 aaPredicted RBP9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 PSMA2P25787 234 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 SKIV2L2P42285 1042 aaKnown RBP9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 HUNKP57058 714 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 NFX1Q12986 1120 aaKnown RBP9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 GPS1Q13098 491 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 LAMC2Q13753 1193 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 MAMDC4Q6UXC1 1216 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 CATSPER4Q7RTX7 472 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 KATNAL2Q8IYT4 538 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 ZBED8Q8IZ13 594 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 TMEM35BQ8NCS4 154 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 MICAL1Q8TDZ2 1067 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 HPDLQ96IR7 371 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 RAB3IPQ96QF0 476 aaPredicted RBP9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 SMC6Q96SB8 1091 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 FAM167BQ9BTA0 163 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 MIS12Q9H081 205 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 PDZD7Q9H5P4 517 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 SLC24A3Q9HC58 644 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 IGKV6-21A0A0C4DH24 114 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 A0A1W2PPM1 405 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 F5H423 210 aaPredicted RBP9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 CBX6O95503 412 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 MMP8P22894 467 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 PSEN1P49768 467 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 ZNF252P-AS1Q0IIN9 211 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 CCDC15Q0P6D6 951 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 PTP4A2Q12974 167 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 SLC1A5Q15758 541 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 TSHZ1Q6ZSZ6 1077 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 ACOT1Q86TX2 421 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 RELL1Q8IUW5 271 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 EXD1Q8NHP7 514 aa9.53□□□□□ -0.88
TM9SF4-207ENST00000495749 LRRC8CQ8TDW0 803 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms