RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 SLC8A3P57103 927 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 TAP1Q03518 808 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 LAMTOR4Q0VGL1 99 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 LY6KQ17RY6 165 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 PCGF5Q86SE9 256 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 TRAPPC12Q8WVT3 735 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 INPP5DQ92835 1189 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 KCNN1Q92952 543 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 NUDCD1Q96RS6 583 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 SDCBP2Q9H190 292 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 R3HDMLQ9H3Y0 253 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 STK32BQ9NY57 414 aa13.63□□□□□ -0.23
PTPN7-217ENST00000495688 E7ESA3 106 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 MAFO75444 373 aaPredicted RBP13.62□□□□□ -0.23
PTPN7-217ENST00000495688 FAM155BO75949 473 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 KRT7P08729 469 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 TPBGLP0DKB5 382 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 GNAZP19086 355 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 ABL2P42684 1182 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 GMPSP49915 693 aaPredicted RBP13.62□□□□□ -0.23
PTPN7-217ENST00000495688 SLC45A4Q5BKX6 768 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 TRIM68Q6AZZ1 485 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 XYLT1Q86Y38 959 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 PDIK1LQ8N165 341 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 SPATA18Q8TC71 538 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 FAM111AQ96PZ2 611 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 ASCC2Q9H1I8 757 aaPredicted RBP13.62□□□□□ -0.23
PTPN7-217ENST00000495688 MANSC1Q9H8J5 431 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 AS3MTQ9HBK9 375 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 DOCK1Q14185 1865 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 DNAH12Q6ZR08 3092 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 TCRBV9S1A1TA0A576 114 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 CFAP69A5D8W1 941 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 KBTBD13C9JR72 458 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 CSDE1O75534 798 aaKnown RBP13.62□□□□□ -0.23
PTPN7-217ENST00000495688 CALB2P22676 271 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 ICAM3P32942 547 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 RFC5P40937 340 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 RAD23BP54727 409 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 FAAP100Q0VG06 881 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 DPYSL3Q14195 570 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 TAF11Q15544 211 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 HADHQ16836 314 aaKnown RBP13.62□□□□□ -0.23
PTPN7-217ENST00000495688 KBTBD12Q3ZCT8 623 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 FYB2Q5VWT5 728 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 EEF1DP3Q658K8 133 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 PEBP4Q96S96 227 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 NRBP2Q9NSY0 501 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 HEY2Q9UBP5 337 aa13.62□□□□□ -0.23
PTPN7-217ENST00000495688 WFS1O76024 890 aa13.61□□□□□ -0.23
PTPN7-217ENST00000495688 CXCL8P10145 99 aa13.61□□□□□ -0.23
PTPN7-217ENST00000495688 AP3M2P53677 418 aa13.61□□□□□ -0.23
PTPN7-217ENST00000495688 YWHAEP62258 255 aaKnown RBP13.61□□□□□ -0.23
PTPN7-217ENST00000495688 PTK7Q13308 1070 aa13.61□□□□□ -0.23
PTPN7-217ENST00000495688 KLHL38Q2WGJ6 581 aa13.61□□□□□ -0.23
PTPN7-217ENST00000495688 PRPF39Q86UA1 669 aaKnown RBP13.61□□□□□ -0.23
PTPN7-217ENST00000495688 STK32AQ8WU08 396 aa13.61□□□□□ -0.23
PTPN7-217ENST00000495688 TTC17Q96AE7 1141 aa13.61□□□□□ -0.23
PTPN7-217ENST00000495688 PIWIL1Q96J94 861 aaKnown RBP13.61□□□□□ -0.23
PTPN7-217ENST00000495688 SMYD3Q9H7B4 428 aa13.61□□□□□ -0.23
PTPN7-217ENST00000495688 ARL8BQ9NVJ2 186 aa13.61□□□□□ -0.23
PTPN7-217ENST00000495688 STRIP2Q9ULQ0 834 aa13.61□□□□□ -0.23
PTPN7-217ENST00000495688 LPXNO60711 386 aa13.61□□□□□ -0.23
PTPN7-217ENST00000495688 PYGBP11216 843 aa13.61□□□□□ -0.23
PTPN7-217ENST00000495688 BGNP21810 368 aa13.61□□□□□ -0.23
PTPN7-217ENST00000495688 POLR2BP30876 1174 aaKnown RBP13.61□□□□□ -0.23
PTPN7-217ENST00000495688 TAZQ16635 292 aa13.61□□□□□ -0.23
PTPN7-217ENST00000495688 NLRP4Q96MN2 994 aa13.61□□□□□ -0.23
PTPN7-217ENST00000495688 SIX4Q9UIU6 781 aa13.61□□□□□ -0.23
PTPN7-217ENST00000495688 USP18Q9UMW8 372 aa13.61□□□□□ -0.23
PTPN7-217ENST00000495688 APOC4-APOC2K7ER74 178 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 MCF2LO15068 1137 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 GRAP2O75791 330 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 APOC2P02655 101 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 MT-ND3P03897 115 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 TROVE2P10155 538 aaKnown RBP eCLIP13.6□□□□□ -0.23
PTPN7-217ENST00000495688 PTPN4P29074 926 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 SERPINB3P29508 390 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 CDO1Q16878 200 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 HSDL1Q3SXM5 330 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 FAXCQ5TGI0 409 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 DSTYKQ6XUX3 929 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 CDHR3Q6ZTQ4 885 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 TTC7BQ86TV6 843 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 TTC13Q8NBP0 860 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 UBA3Q8TBC4 463 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 FAXDC2Q96IV6 333 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 C12orf42Q96LP6 360 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 TSSK1BQ9BXA7 367 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 CADM1Q9BY67 442 aaKnown RBP13.6□□□□□ -0.23
PTPN7-217ENST00000495688 PPCSQ9HAB8 311 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 KCNK13Q9HB14 408 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 SSU72Q9NP77 194 aaKnown RBP13.6□□□□□ -0.23
PTPN7-217ENST00000495688 ZNF112Q9UJU3 913 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 EFR3BQ9Y2G0 817 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 E5RJQ4 531 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 INO80B-WBP1J3KQ70 363 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 CCNG1P51959 295 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 EFNA5P52803 228 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 YWHAGP61981 247 aaKnown RBP eCLIP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms