RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 LYSMD4Q5XG99 296 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 CRELD2Q6UXH1 353 aaPredicted RBP14.43□□□□□ -0.1
COL1A1-209ENST00000495677 PDCL2Q8N4E4 241 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 TXNDC5Q8NBS9 432 aaKnown RBP14.43□□□□□ -0.1
COL1A1-209ENST00000495677 STKLD1Q8NE28 680 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 KCNV2Q8TDN2 545 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 SPATA17Q96L03 361 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 PNKPQ96T60 521 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 REEP2Q9BRK0 252 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 PARVGQ9HBI0 331 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 DNAAF2Q9NVR5 837 aaKnown RBP14.43□□□□□ -0.1
COL1A1-209ENST00000495677 GDAP2Q9NXN4 497 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 DDX43Q9NXZ2 648 aaKnown RBP14.43□□□□□ -0.1
COL1A1-209ENST00000495677 GTF3C4Q9UKN8 822 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 LIMCH1Q9UPQ0 1083 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 ANKRD63C9JTQ0 380 aa14.42□□□□□ -0.1
COL1A1-209ENST00000495677 K7ENM7 598 aa14.42□□□□□ -0.1
COL1A1-209ENST00000495677 SGK1O00141 431 aa14.42□□□□□ -0.1
COL1A1-209ENST00000495677 SLC9A3R1O14745 358 aaPredicted RBP14.42□□□□□ -0.1
COL1A1-209ENST00000495677 GABRDO14764 452 aa14.42□□□□□ -0.1
COL1A1-209ENST00000495677 IL18RAPO95256 599 aa14.42□□□□□ -0.1
COL1A1-209ENST00000495677 CD59P13987 128 aa14.42□□□□□ -0.1
COL1A1-209ENST00000495677 ITPKAP23677 461 aa14.42□□□□□ -0.1
COL1A1-209ENST00000495677 PPP3CCP48454 512 aa14.42□□□□□ -0.1
COL1A1-209ENST00000495677 SLC7A9P82251 487 aa14.42□□□□□ -0.1
COL1A1-209ENST00000495677 ATP2C1P98194 919 aaPredicted RBP14.42□□□□□ -0.1
COL1A1-209ENST00000495677 MYL7Q01449 175 aa14.42□□□□□ -0.1
COL1A1-209ENST00000495677 GFPT1Q06210 699 aaPredicted RBP14.42□□□□□ -0.1
COL1A1-209ENST00000495677 ZC2HC1CQ53FD0 456 aaPredicted RBP14.42□□□□□ -0.1
COL1A1-209ENST00000495677 ARL6IP4Q66PJ3 421 aaKnown RBP14.42□□□□□ -0.1
COL1A1-209ENST00000495677 ADALQ6DHV7 355 aa14.42□□□□□ -0.1
COL1A1-209ENST00000495677 FAM171BQ6P995 826 aa14.42□□□□□ -0.1
COL1A1-209ENST00000495677 SLC36A4Q6YBV0 504 aa14.42□□□□□ -0.1
COL1A1-209ENST00000495677 MYCT1Q8N699 235 aa14.42□□□□□ -0.1
COL1A1-209ENST00000495677 ALLCQ8N6M5 410 aa14.42□□□□□ -0.1
COL1A1-209ENST00000495677 FRMD1Q8N878 549 aa14.42□□□□□ -0.1
COL1A1-209ENST00000495677 ADAMTS14Q8WXS8 1223 aa14.42□□□□□ -0.1
COL1A1-209ENST00000495677 AGO2Q9UKV8 859 aaKnown RBP14.42□□□□□ -0.1
COL1A1-209ENST00000495677 L1RE1Q9UN81 338 aa14.42□□□□□ -0.1
COL1A1-209ENST00000495677 IGSF10Q6WRI0 2623 aa14.42□□□□□ -0.1
COL1A1-209ENST00000495677 LEFTY2O00292 366 aa14.41□□□□□ -0.1
COL1A1-209ENST00000495677 ARHGAP33O14559 1287 aa14.41□□□□□ -0.1
COL1A1-209ENST00000495677 HUS1O60921 280 aa14.41□□□□□ -0.1
COL1A1-209ENST00000495677 KAT7O95251 611 aa14.41□□□□□ -0.1
COL1A1-209ENST00000495677 OLFM2O95897 454 aa14.41□□□□□ -0.1
COL1A1-209ENST00000495677 APODP05090 189 aa14.41□□□□□ -0.1
COL1A1-209ENST00000495677 CYP17A1P05093 508 aa14.41□□□□□ -0.1
COL1A1-209ENST00000495677 LHX1P48742 406 aa14.41□□□□□ -0.1
COL1A1-209ENST00000495677 FAM193AP78312 1265 aa14.41□□□□□ -0.1
COL1A1-209ENST00000495677 SCAPQ12770 1279 aa14.41□□□□□ -0.1
COL1A1-209ENST00000495677 POSTNQ15063 836 aa14.41□□□□□ -0.1
COL1A1-209ENST00000495677 DHCR24Q15392 516 aa14.41□□□□□ -0.1
COL1A1-209ENST00000495677 ZRSR1Q15695 479 aaKnown RBP14.41□□□□□ -0.1
COL1A1-209ENST00000495677 DPH6Q7L8W6 267 aa14.41□□□□□ -0.1
COL1A1-209ENST00000495677 PDZD3Q86UT5 571 aa14.41□□□□□ -0.1
COL1A1-209ENST00000495677 CCDC83Q8IWF9 413 aa14.41□□□□□ -0.1
COL1A1-209ENST00000495677 LRRC52Q8N7C0 313 aa14.41□□□□□ -0.1
COL1A1-209ENST00000495677 CDK5RAP3Q96JB5 506 aa14.41□□□□□ -0.1
COL1A1-209ENST00000495677 ASXL3Q9C0F0 2248 aa14.41□□□□□ -0.1
COL1A1-209ENST00000495677 SMG1Q96Q15 3661 aaKnown RBP14.4□□□□□ -0.1
COL1A1-209ENST00000495677 GCN1Q92616 2671 aaKnown RBP14.4□□□□□ -0.1
COL1A1-209ENST00000495677 GOLGA4Q13439 2230 aaKnown RBP14.4□□□□□ -0.1
COL1A1-209ENST00000495677 A0A1W2PQD8 194 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 ADAM23O75077 832 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 GJB3O75712 270 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 FAM13AO94988 1023 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 KLF8O95600 359 aaPredicted RBP14.4□□□□□ -0.1
COL1A1-209ENST00000495677 SYPP08247 313 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 PCSK1P29120 753 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 TIE1P35590 1138 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 GRIA2P42262 883 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 SLC6A11P48066 632 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 ZNF33AQ06730 810 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 RILPL1Q5EBL4 403 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 RHBDF2Q6PJF5 856 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 VSTM1Q6UX27 236 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 CCNI2Q6ZMN8 369 aaPredicted RBP14.4□□□□□ -0.1
COL1A1-209ENST00000495677 ARMCX6Q7L4S7 300 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 FILIP1Q7Z7B0 1213 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 SPATA2LQ8IUW3 424 aaPredicted RBP14.4□□□□□ -0.1
COL1A1-209ENST00000495677 MINDY1Q8N5J2 469 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 FAM184AQ8NB25 1140 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 CXorf38Q8TB03 319 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 AK8Q96MA6 479 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 PLIN2Q99541 437 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 TTLL2Q9BWV7 592 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 EHD2Q9NZN4 543 aa14.4□□□□□ -0.1
COL1A1-209ENST00000495677 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.39□□□□□ -0.11
COL1A1-209ENST00000495677 CFIP05156 583 aa14.39□□□□□ -0.11
COL1A1-209ENST00000495677 MESP2Q0VG99 397 aa14.39□□□□□ -0.11
COL1A1-209ENST00000495677 TRIP6Q15654 476 aaKnown RBP14.39□□□□□ -0.11
COL1A1-209ENST00000495677 PREPLQ4J6C6 727 aaPredicted RBP14.39□□□□□ -0.11
COL1A1-209ENST00000495677 EMC10Q5UCC4 262 aa14.39□□□□□ -0.11
COL1A1-209ENST00000495677 C4orf50Q6ZRC1 276 aa14.39□□□□□ -0.11
COL1A1-209ENST00000495677 LIMS2Q7Z4I7 341 aa14.39□□□□□ -0.11
COL1A1-209ENST00000495677 GLRX5Q86SX6 157 aa14.39□□□□□ -0.11
COL1A1-209ENST00000495677 TTC30AQ86WT1 665 aa14.39□□□□□ -0.11
COL1A1-209ENST00000495677 PHTF2Q8N3S3 785 aa14.39□□□□□ -0.11
COL1A1-209ENST00000495677 TOP6BLQ8N6T0 577 aa14.39□□□□□ -0.11
COL1A1-209ENST00000495677 C1orf127Q8N9H9 656 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms