RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 VCPIP1Q96JH7 1222 aa5.22□□□□□ -1.57
SRRM1-219ENST00000495561 EFHD1Q9BUP0 239 aa5.22□□□□□ -1.57
SRRM1-219ENST00000495561 CXorf36Q9H7Y0 433 aa5.22□□□□□ -1.57
SRRM1-219ENST00000495561 XPR1Q9UBH6 696 aa5.22□□□□□ -1.57
SRRM1-219ENST00000495561 IGKV2D-30A0A075B6S6 120 aa5.21□□□□□ -1.58
SRRM1-219ENST00000495561 LY6G6EA0A0G2JKS1 128 aa5.21□□□□□ -1.58
SRRM1-219ENST00000495561 DSCR3O14972 297 aa5.21□□□□□ -1.58
SRRM1-219ENST00000495561 PRKCBP05771 671 aa5.21□□□□□ -1.58
SRRM1-219ENST00000495561 POU2F2P09086 479 aa5.21□□□□□ -1.58
SRRM1-219ENST00000495561 PRF1P14222 555 aa5.21□□□□□ -1.58
SRRM1-219ENST00000495561 ADORA2AP29274 412 aa5.21□□□□□ -1.58
SRRM1-219ENST00000495561 RECQLP46063 649 aaPredicted RBP5.21□□□□□ -1.58
SRRM1-219ENST00000495561 KCNJ5P48544 419 aa5.21□□□□□ -1.58
SRRM1-219ENST00000495561 HTRA4P83105 476 aaPredicted RBP5.21□□□□□ -1.58
SRRM1-219ENST00000495561 E2F1Q01094 437 aa5.21□□□□□ -1.58
SRRM1-219ENST00000495561 RBMS2Q15434 407 aaKnown RBP5.21□□□□□ -1.58
SRRM1-219ENST00000495561 FAM187BQ17R55 369 aa5.21□□□□□ -1.58
SRRM1-219ENST00000495561 TRIM71Q2Q1W2 868 aaKnown RBP5.21□□□□□ -1.58
SRRM1-219ENST00000495561 PGS1Q32NB8 556 aa5.21□□□□□ -1.58
SRRM1-219ENST00000495561 DPY19L3Q6ZPD9 716 aa5.21□□□□□ -1.58
SRRM1-219ENST00000495561 CATIPQ7Z7H3 387 aa5.21□□□□□ -1.58
SRRM1-219ENST00000495561 SLC15A3Q8IY34 581 aa5.21□□□□□ -1.58
SRRM1-219ENST00000495561 OSCP1Q8WVF1 389 aa5.21□□□□□ -1.58
SRRM1-219ENST00000495561 SLC35A4Q96G79 324 aa5.21□□□□□ -1.58
SRRM1-219ENST00000495561 DPCDQ9BVM2 203 aaPredicted RBP5.21□□□□□ -1.58
SRRM1-219ENST00000495561 ASIC5Q9NY37 505 aa5.21□□□□□ -1.58
SRRM1-219ENST00000495561 PCDHA6Q9UN73 950 aa5.21□□□□□ -1.58
SRRM1-219ENST00000495561 AP4M1O00189 453 aa5.2□□□□□ -1.58
SRRM1-219ENST00000495561 VNN1O95497 513 aa5.2□□□□□ -1.58
SRRM1-219ENST00000495561 TMEM191BP0C7N4 346 aa5.2□□□□□ -1.58
SRRM1-219ENST00000495561 LRPAP1P30533 357 aa5.2□□□□□ -1.58
SRRM1-219ENST00000495561 TWIST1Q15672 202 aa5.2□□□□□ -1.58
SRRM1-219ENST00000495561 LY6KQ17RY6 165 aa5.2□□□□□ -1.58
SRRM1-219ENST00000495561 MIDNQ504T8 468 aa5.2□□□□□ -1.58
SRRM1-219ENST00000495561 C10orf25Q5T742 122 aa5.2□□□□□ -1.58
SRRM1-219ENST00000495561 BCDIN3DQ7Z5W3 292 aaKnown RBP5.2□□□□□ -1.58
SRRM1-219ENST00000495561 CAND1Q86VP6 1230 aaKnown RBP5.2□□□□□ -1.58
SRRM1-219ENST00000495561 ZNF280BQ86YH2 543 aa5.2□□□□□ -1.58
SRRM1-219ENST00000495561 PRPF38AQ8NAV1 312 aaKnown RBP5.2□□□□□ -1.58
SRRM1-219ENST00000495561 MMS19Q96T76 1030 aa5.2□□□□□ -1.58
SRRM1-219ENST00000495561 TFCP2L1Q9NZI6 479 aa5.2□□□□□ -1.58
SRRM1-219ENST00000495561 TMEM232C9JQI7 657 aa5.19□□□□□ -1.58
SRRM1-219ENST00000495561 A1BGP04217 495 aa5.19□□□□□ -1.58
SRRM1-219ENST00000495561 HOXD9P28356 352 aaPredicted RBP5.19□□□□□ -1.58
SRRM1-219ENST00000495561 UCP3P55916 312 aa5.19□□□□□ -1.58
SRRM1-219ENST00000495561 EVA1CP58658 441 aa5.19□□□□□ -1.58
SRRM1-219ENST00000495561 ZIK1Q3SY52 487 aaPredicted RBP5.19□□□□□ -1.58
SRRM1-219ENST00000495561 CCDC157Q569K6 752 aa5.19□□□□□ -1.58
SRRM1-219ENST00000495561 KHDC1LQ5JSQ8 128 aa5.19□□□□□ -1.58
SRRM1-219ENST00000495561 IZUMO1Q8IYV9 350 aa5.19□□□□□ -1.58
SRRM1-219ENST00000495561 ABRAQ8N0Z2 381 aa5.19□□□□□ -1.58
SRRM1-219ENST00000495561 ZNF398Q8TD17 642 aa5.19□□□□□ -1.58
SRRM1-219ENST00000495561 ADAMTS18Q8TE60 1221 aa5.19□□□□□ -1.58
SRRM1-219ENST00000495561 CUL5Q93034 780 aa5.19□□□□□ -1.58
SRRM1-219ENST00000495561 PRR25Q96S07 402 aa5.19□□□□□ -1.58
SRRM1-219ENST00000495561 SMAD5Q99717 465 aaKnown RBP5.19□□□□□ -1.58
SRRM1-219ENST00000495561 GTPBP4Q9BZE4 634 aaKnown RBP5.19□□□□□ -1.58
SRRM1-219ENST00000495561 TMX2Q9Y320 296 aa5.19□□□□□ -1.58
SRRM1-219ENST00000495561 SNX14Q9Y5W7 946 aa5.19□□□□□ -1.58
SRRM1-219ENST00000495561 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.19□□□□□ -1.58
SRRM1-219ENST00000495561 FAM90A10PA6NDY2 464 aa5.18□□□□□ -1.58
SRRM1-219ENST00000495561 ALG1L2C9J202 215 aa5.18□□□□□ -1.58
SRRM1-219ENST00000495561 MYCLP12524 364 aaPredicted RBP5.18□□□□□ -1.58
SRRM1-219ENST00000495561 SCP2P22307 547 aa5.18□□□□□ -1.58
SRRM1-219ENST00000495561 PSG6Q00889 435 aa5.18□□□□□ -1.58
SRRM1-219ENST00000495561 SATB1Q01826 763 aa5.18□□□□□ -1.58
SRRM1-219ENST00000495561 GHRHRQ02643 423 aa5.18□□□□□ -1.58
SRRM1-219ENST00000495561 MEPCEQ7L2J0 689 aaKnown RBP5.18□□□□□ -1.58
SRRM1-219ENST00000495561 MARK4Q96L34 752 aa5.18□□□□□ -1.58
SRRM1-219ENST00000495561 FYTTD1Q96QD9 318 aaKnown RBP5.18□□□□□ -1.58
SRRM1-219ENST00000495561 MESP1Q9BRJ9 268 aa5.18□□□□□ -1.58
SRRM1-219ENST00000495561 ASPSCR1Q9BZE9 553 aa5.18□□□□□ -1.58
SRRM1-219ENST00000495561 SARS2Q9NP81 518 aaKnown RBP5.18□□□□□ -1.58
SRRM1-219ENST00000495561 TRMT13Q9NUP7 481 aaKnown RBP5.18□□□□□ -1.58
SRRM1-219ENST00000495561 SPEF1Q9Y4P9 236 aa5.18□□□□□ -1.58
SRRM1-219ENST00000495561 WASHC2CQ9Y4E1 1318 aa5.18□□□□□ -1.58
SRRM1-219ENST00000495561 BTBD19C9JJ37 291 aa5.17□□□□□ -1.58
SRRM1-219ENST00000495561 SNUPNO95149 360 aaKnown RBP5.17□□□□□ -1.58
SRRM1-219ENST00000495561 CYP2C9P11712 490 aa5.17□□□□□ -1.58
SRRM1-219ENST00000495561 KCNA3P22001 575 aa5.17□□□□□ -1.58
SRRM1-219ENST00000495561 SLC11A2P49281 568 aa5.17□□□□□ -1.58
SRRM1-219ENST00000495561 DGKEP52429 567 aa5.17□□□□□ -1.58
SRRM1-219ENST00000495561 AMPD3Q01432 767 aa5.17□□□□□ -1.58
SRRM1-219ENST00000495561 KRT17Q04695 432 aa5.17□□□□□ -1.58
SRRM1-219ENST00000495561 TMEM240Q5SV17 173 aa5.17□□□□□ -1.58
SRRM1-219ENST00000495561 SFTPA1Q8IWL2 248 aa5.17□□□□□ -1.58
SRRM1-219ENST00000495561 SPATA3Q8NHX4 192 aa5.17□□□□□ -1.58
SRRM1-219ENST00000495561 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.17□□□□□ -1.58
SRRM1-219ENST00000495561 MVB12AQ96EY5 273 aa5.17□□□□□ -1.58
SRRM1-219ENST00000495561 CDK5RAP3Q96JB5 506 aa5.17□□□□□ -1.58
SRRM1-219ENST00000495561 FOXP1Q9H334 677 aaPredicted RBP5.17□□□□□ -1.58
SRRM1-219ENST00000495561 AMFRQ9UKV5 643 aa5.17□□□□□ -1.58
SRRM1-219ENST00000495561 MED16Q9Y2X0 877 aa5.17□□□□□ -1.58
SRRM1-219ENST00000495561 TTC3P53804 2025 aa5.17□□□□□ -1.58
SRRM1-219ENST00000495561 GCATO75600 419 aa5.16□□□□□ -1.58
SRRM1-219ENST00000495561 ABLIM3O94929 683 aa5.16□□□□□ -1.58
SRRM1-219ENST00000495561 IL33O95760 270 aa5.16□□□□□ -1.58
SRRM1-219ENST00000495561 FGAP02671 866 aa5.16□□□□□ -1.58
SRRM1-219ENST00000495561 WNT3P56703 355 aa5.16□□□□□ -1.58
SRRM1-219ENST00000495561 LEXMQ3ZCV2 418 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms