RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 SLCO2A1Q92959 643 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 ZNF560Q96MR9 790 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 PPP1R16BQ96T49 567 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 OSMRQ99650 979 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 HPCAL4Q9UM19 191 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 POLIQ9UNA4 740 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 GINS2Q9Y248 185 aa17.16■□□□□ 0.34
CBX4-204ENST00000495122 MRPL42Q9Y6G3 142 aaKnown RBP17.16■□□□□ 0.34
CBX4-204ENST00000495122 TCRBV5S1A1TA0A578 114 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 TMEM191CA6NGB0 347 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 GRM6O15303 877 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 CSDE1O75534 798 aaKnown RBP17.15■□□□□ 0.34
CBX4-204ENST00000495122 RPS6KA5O75582 802 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 SETSIPP0DME0 302 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 KCNA5P22460 613 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 COPS2P61201 443 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 CBX1P83916 185 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 SLC7A5Q01650 507 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 NFX1Q12986 1120 aaKnown RBP17.15■□□□□ 0.34
CBX4-204ENST00000495122 ZNF268Q14587 947 aaPredicted RBP17.15■□□□□ 0.34
CBX4-204ENST00000495122 ACAP1Q15027 740 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 SGO2Q562F6 1265 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 SPDYCQ5MJ68 293 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 PPP1R15BQ5SWA1 713 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 SYDE1Q6ZW31 735 aaPredicted RBP17.15■□□□□ 0.34
CBX4-204ENST00000495122 FAM228AQ86W67 206 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 PASD1Q8IV76 773 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 HACE1Q8IYU2 909 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 SLC4A11Q8NBS3 891 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 C1orf131Q8NDD1 294 aaKnown RBP17.15■□□□□ 0.34
CBX4-204ENST00000495122 EXD1Q8NHP7 514 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 AP1M1Q9BXS5 423 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 CHST12Q9NRB3 414 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 PARP2Q9UGN5 583 aa17.15■□□□□ 0.34
CBX4-204ENST00000495122 FEZ2Q9UHY8 353 aaPredicted RBP17.15■□□□□ 0.34
CBX4-204ENST00000495122 MYBL2P10244 700 aa17.14■□□□□ 0.33
CBX4-204ENST00000495122 CD19P15391 556 aa17.14■□□□□ 0.33
CBX4-204ENST00000495122 PTPN7P35236 360 aa17.14■□□□□ 0.33
CBX4-204ENST00000495122 GABRB2P47870 512 aa17.14■□□□□ 0.33
CBX4-204ENST00000495122 GATMP50440 423 aa17.14■□□□□ 0.33
CBX4-204ENST00000495122 RNASE9P60153 205 aaKnown RBP17.14■□□□□ 0.33
CBX4-204ENST00000495122 DR1Q01658 176 aa17.14■□□□□ 0.33
CBX4-204ENST00000495122 PAN2Q504Q3 1202 aaKnown RBP17.14■□□□□ 0.33
CBX4-204ENST00000495122 CASKIN2Q8WXE0 1202 aa17.14■□□□□ 0.33
CBX4-204ENST00000495122 TFAP2BQ92481 460 aa17.14■□□□□ 0.33
CBX4-204ENST00000495122 LRRC45Q96CN5 670 aa17.14■□□□□ 0.33
CBX4-204ENST00000495122 PABPC5Q96DU9 382 aaKnown RBP17.14■□□□□ 0.33
CBX4-204ENST00000495122 RBM41Q96IZ5 413 aaKnown RBP17.14■□□□□ 0.33
CBX4-204ENST00000495122 NT5C1AQ9BXI3 368 aa17.14■□□□□ 0.33
CBX4-204ENST00000495122 DDX47Q9H0S4 455 aaKnown RBP17.14■□□□□ 0.33
CBX4-204ENST00000495122 LRRC19Q9H756 370 aa17.14■□□□□ 0.33
CBX4-204ENST00000495122 SMYD3Q9H7B4 428 aa17.14■□□□□ 0.33
CBX4-204ENST00000495122 RGS18Q9NS28 235 aa17.14■□□□□ 0.33
CBX4-204ENST00000495122 DDX56Q9NY93 547 aaKnown RBP17.14■□□□□ 0.33
CBX4-204ENST00000495122 ST3GAL5Q9UNP4 418 aa17.14■□□□□ 0.33
CBX4-204ENST00000495122 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.14■□□□□ 0.33
CBX4-204ENST00000495122 ZMYND10O75800 440 aa17.13■□□□□ 0.33
CBX4-204ENST00000495122 CALCAP01258 141 aa17.13■□□□□ 0.33
CBX4-204ENST00000495122 PYGMP11217 842 aa17.13■□□□□ 0.33
CBX4-204ENST00000495122 MTMR3Q13615 1198 aa17.13■□□□□ 0.33
CBX4-204ENST00000495122 LCLAT1Q6UWP7 414 aa17.13■□□□□ 0.33
CBX4-204ENST00000495122 SND1Q7KZF4 910 aaKnown RBP eCLIP17.13■□□□□ 0.33
CBX4-204ENST00000495122 POLNQ7Z5Q5 900 aa17.13■□□□□ 0.33
CBX4-204ENST00000495122 IPO4Q8TEX9 1081 aaKnown RBP17.13■□□□□ 0.33
CBX4-204ENST00000495122 GRK7Q8WTQ7 553 aa17.13■□□□□ 0.33
CBX4-204ENST00000495122 DDX27Q96GQ7 796 aaKnown RBP17.13■□□□□ 0.33
CBX4-204ENST00000495122 ADAM2Q99965 735 aa17.13■□□□□ 0.33
CBX4-204ENST00000495122 SDCBP2Q9H190 292 aa17.13■□□□□ 0.33
CBX4-204ENST00000495122 SNTG2Q9NY99 539 aa17.13■□□□□ 0.33
CBX4-204ENST00000495122 LRFN2Q9ULH4 789 aa17.13■□□□□ 0.33
CBX4-204ENST00000495122 PIN4Q9Y237 131 aaKnown RBP17.13■□□□□ 0.33
CBX4-204ENST00000495122 SIGLEC16A6NMB1 481 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 C9IYK1 514 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 O00370 1275 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 GPR182O15218 404 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 OPA1O60313 960 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 RECQL4O94761 1208 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 CFHP08603 1231 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 ITGA4P13612 1032 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 OAS2P29728 719 aaKnown RBP17.12■□□□□ 0.33
CBX4-204ENST00000495122 MARCKSL1P49006 195 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 CARSP49589 748 aaKnown RBP17.12■□□□□ 0.33
CBX4-204ENST00000495122 ZNF211Q13398 564 aaPredicted RBP17.12■□□□□ 0.33
CBX4-204ENST00000495122 DSC3Q14574 896 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 DCUN1D2Q6PH85 259 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 RCOR2Q8IZ40 523 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 WDTC1Q8N5D0 677 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 PRELID2Q8N945 189 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 C18orf8Q96DM3 657 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 BTBD6Q96KE9 485 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 NCAPGQ9BPX3 1015 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 ERP44Q9BS26 406 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 ELOVL4Q9GZR5 314 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 CYLDQ9NQC7 956 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 GDAP2Q9NXN4 497 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 AMACRQ9UHK6 382 aa17.12■□□□□ 0.33
CBX4-204ENST00000495122 GOLGA6BA6NDN3 693 aa17.11■□□□□ 0.33
CBX4-204ENST00000495122 HSF2BPO75031 334 aa17.11■□□□□ 0.33
CBX4-204ENST00000495122 IL9P15248 144 aa17.11■□□□□ 0.33
CBX4-204ENST00000495122 FGFR4P22455 802 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms