RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 CYP4F22Q6NT55 531 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 LRIG3Q6UXM1 1119 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 LEKR1Q6ZMV7 388 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 FAM228AQ86W67 206 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 UNC45BQ8IWX7 931 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 MCRS1Q96EZ8 462 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 VRTNQ9H8Y1 702 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 MFHAS1Q9Y4C4 1052 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 F8W810 466 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 PTGESO14684 152 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 TRIM66O15016 1216 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 ATF2P15336 505 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 KDELR1P24390 212 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 ARSEP51690 589 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 CALCOCO2Q13137 446 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 CCDC14Q49A88 953 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 PAN2Q504Q3 1202 aaKnown RBP10.92□□□□□ -0.66
SAMM50-206ENST00000494795 TFDP3Q5H9I0 405 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 GNASQ5JWF2 1037 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 GDF6Q6KF10 455 aaPredicted RBP10.92□□□□□ -0.66
SAMM50-206ENST00000494795 SCYL2Q6P3W7 929 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 NOTUMQ6P988 496 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 ZC3H18Q86VM9 953 aaKnown RBP10.92□□□□□ -0.66
SAMM50-206ENST00000494795 OSTM1Q86WC4 334 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 SNF8Q96H20 258 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 ZNF518BQ9C0D4 1074 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 ANAPC5Q9UJX4 755 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 USP18Q9UMW8 372 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.92□□□□□ -0.66
SAMM50-206ENST00000494795 SMIM35A0A1B0GVV1 85 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 A8MXQ7 604 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 I3L4J1 428 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 RARBP10826 455 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 VDRP11473 427 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 LCP1P13796 627 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 PDGFRAP16234 1089 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 YARSP54577 528 aaKnown RBP10.92□□□□□ -0.66
SAMM50-206ENST00000494795 GPS1Q13098 491 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 PIGHQ14442 188 aaPredicted RBP10.92□□□□□ -0.66
SAMM50-206ENST00000494795 OASLQ15646 514 aaKnown RBP10.92□□□□□ -0.66
SAMM50-206ENST00000494795 PKDCCQ504Y2 493 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 RGMBQ6NW40 437 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 RCOR2Q8IZ40 523 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 SLCO2A1Q92959 643 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.92□□□□□ -0.66
SAMM50-206ENST00000494795 MRPL42Q9Y6G3 142 aaKnown RBP10.92□□□□□ -0.66
SAMM50-206ENST00000494795 C2CD4BA6NLJ0 364 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 MAN1A1P33908 653 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 MDH1P40925 334 aaKnown RBP10.91□□□□□ -0.66
SAMM50-206ENST00000494795 AUHQ13825 339 aaKnown RBP10.91□□□□□ -0.66
SAMM50-206ENST00000494795 PPP2R5EQ16537 467 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 MSS51Q4VC12 460 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 LCLAT1Q6UWP7 414 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 C3orf58Q8NDZ4 430 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 GSTCDQ8NEC7 633 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.91□□□□□ -0.664e-8■■■■■ 36.3
SAMM50-206ENST00000494795 WDR83Q9BRX9 315 aaKnown RBP10.91□□□□□ -0.66
SAMM50-206ENST00000494795 RHOBTB2Q9BYZ6 727 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 TMEM30AQ9NV96 361 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 NINJ2Q9NZG7 142 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 RRN3P2A6NIE6 340 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 HMGB1P1B2RPK0 211 aaPredicted RBP10.91□□□□□ -0.66
SAMM50-206ENST00000494795 SGK1O00141 431 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 MED7O43513 233 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 TRUB2O95900 331 aaKnown RBP10.91□□□□□ -0.66
SAMM50-206ENST00000494795 RARGP13631 454 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 ELNP15502 786 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 ATICP31939 592 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 NDUFV1P49821 464 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 LRRC14Q15048 493 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 NBPF20Q3BBV1 942 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 FAM47CQ5HY64 1035 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 TWF2Q6IBS0 349 aaKnown RBP10.91□□□□□ -0.66
SAMM50-206ENST00000494795 OLFML1Q6UWY5 402 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 ZNF365Q70YC5 407 aa10.91□□□□□ -0.66
SAMM50-206ENST00000494795 AGO3Q9H9G7 860 aaKnown RBP10.91□□□□□ -0.66
SAMM50-206ENST00000494795 NGRNQ9NPE2 291 aaKnown RBP10.91□□□□□ -0.66
SAMM50-206ENST00000494795 C17orf102A2RUQ5 167 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 GOLGA6L10A6NI86 522 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 F5H423 210 aaPredicted RBP10.9□□□□□ -0.66
SAMM50-206ENST00000494795 IGHA2P01877 340 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 CHRNA1P02708 482 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 AMHP03971 560 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 NUDT17P0C025 328 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 IL4RP24394 825 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 GABRB2P47870 512 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 MTMR3Q13615 1198 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 C1orf228Q6PIY5 440 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 ANKMY2Q8IV38 441 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 PYROXD2Q8N2H3 581 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 NIPA2Q8N8Q9 360 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 KCTD6Q8NC69 237 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 SLC2A14Q8TDB8 520 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 SLC35F5Q8WV83 523 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 TLCD1Q96CP7 247 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 PLVAPQ9BX97 442 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 CNTN3Q9P232 1028 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 UNCXA6NJT0 531 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 PIRO00625 290 aa10.9□□□□□ -0.66
SAMM50-206ENST00000494795 HMGCRP04035 888 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms