RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 TRAV19A0A0A6YYK7 116 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 OTOL1A6NHN0 477 aaPredicted RBP16.6■□□□□ 0.25
LIMS2-216ENST00000494613 TRIM49P0CI25 452 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 TRIM49CP0CI26 452 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 CTHP32929 405 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 ENPEPQ07075 957 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 RUNX3Q13761 415 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 EDRF1Q3B7T1 1238 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 ZNF528Q3MIS6 628 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 ZNF658Q5TYW1 1059 aaPredicted RBP16.6■□□□□ 0.25
LIMS2-216ENST00000494613 TRIM68Q6AZZ1 485 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 CC2D1AQ6P1N0 951 aaPredicted RBP16.6■□□□□ 0.25
LIMS2-216ENST00000494613 C1orf228Q6PIY5 440 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 SCARA5Q6ZMJ2 495 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 SPATA20Q8TB22 786 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 MSANTD3Q96H12 275 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 ELOVL4Q9GZR5 314 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 CHRDQ9H2X0 955 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 EBF3Q9H4W6 596 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 KIF9Q9HAQ2 790 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 HPS4Q9NQG7 708 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 EHD2Q9NZN4 543 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 USP34Q70CQ2 3546 aa16.6■□□□□ 0.25
LIMS2-216ENST00000494613 ZNF840PA6NDX5 716 aa16.59■□□□□ 0.25
LIMS2-216ENST00000494613 CETN3O15182 167 aa16.59■□□□□ 0.25
LIMS2-216ENST00000494613 SMC2O95347 1197 aa16.59■□□□□ 0.25
LIMS2-216ENST00000494613 PPP3CCP48454 512 aa16.59■□□□□ 0.25
LIMS2-216ENST00000494613 NDST1P52848 882 aa16.59■□□□□ 0.25
LIMS2-216ENST00000494613 TAF10Q12962 218 aa16.59■□□□□ 0.25
LIMS2-216ENST00000494613 PON2Q15165 354 aa16.59■□□□□ 0.25
LIMS2-216ENST00000494613 WDR44Q5JSH3 913 aa16.59■□□□□ 0.25
LIMS2-216ENST00000494613 ANKRD40Q6AI12 368 aa16.59■□□□□ 0.25
LIMS2-216ENST00000494613 TSSK4Q6SA08 328 aa16.59■□□□□ 0.25
LIMS2-216ENST00000494613 NUP93Q8N1F7 819 aa16.59■□□□□ 0.25
LIMS2-216ENST00000494613 TAS1R2Q8TE23 839 aa16.59■□□□□ 0.25
LIMS2-216ENST00000494613 MED10Q9BTT4 135 aa16.59■□□□□ 0.25
LIMS2-216ENST00000494613 RNF38Q9H0F5 515 aa16.59■□□□□ 0.25
LIMS2-216ENST00000494613 LINC00597Q9H2U6 94 aa16.59■□□□□ 0.25
LIMS2-216ENST00000494613 RBM12Q9NTZ6 932 aaKnown RBP16.59■□□□□ 0.25
LIMS2-216ENST00000494613 CHORDC1Q9UHD1 332 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-216ENST00000494613 ABL1P00519 1130 aa16.58■□□□□ 0.24
LIMS2-216ENST00000494613 CKMP06732 381 aa16.58■□□□□ 0.24
LIMS2-216ENST00000494613 ARSAP15289 507 aa16.58■□□□□ 0.24
LIMS2-216ENST00000494613 GTF2H1P32780 548 aa16.58■□□□□ 0.24
LIMS2-216ENST00000494613 PIK3CAP42336 1068 aa16.58■□□□□ 0.24
LIMS2-216ENST00000494613 ZXDBP98169 803 aa16.58■□□□□ 0.24
LIMS2-216ENST00000494613 ORC1Q13415 861 aa16.58■□□□□ 0.24
LIMS2-216ENST00000494613 GAS6Q14393 721 aa16.58■□□□□ 0.24
LIMS2-216ENST00000494613 COBLL1Q53SF7 1204 aa16.58■□□□□ 0.24
LIMS2-216ENST00000494613 ISM2Q6H9L7 571 aa16.58■□□□□ 0.24
LIMS2-216ENST00000494613 UNC93AQ86WB7 457 aa16.58■□□□□ 0.24
LIMS2-216ENST00000494613 ELOA2Q8IYF1 753 aaPredicted RBP16.58■□□□□ 0.24
LIMS2-216ENST00000494613 FUKQ8N0W3 1084 aa16.58■□□□□ 0.24
LIMS2-216ENST00000494613 C12orf29Q8N999 325 aa16.58■□□□□ 0.24
LIMS2-216ENST00000494613 TTC16Q8NEE8 873 aa16.58■□□□□ 0.24
LIMS2-216ENST00000494613 SMARCE1Q969G3 411 aa16.58■□□□□ 0.24
LIMS2-216ENST00000494613 MMRN2Q9H8L6 949 aa16.58■□□□□ 0.24
LIMS2-216ENST00000494613 APOBEC3GQ9HC16 384 aaKnown RBP16.58■□□□□ 0.24
LIMS2-216ENST00000494613 HOOK1Q9UJC3 728 aaKnown RBP16.58■□□□□ 0.24
LIMS2-216ENST00000494613 TICRRQ7Z2Z1 1910 aa16.58■□□□□ 0.24
LIMS2-216ENST00000494613 DENND4CQ5VZ89 1909 aa16.57■□□□□ 0.24
LIMS2-216ENST00000494613 TNFRSF10BO14763 440 aa16.57■□□□□ 0.24
LIMS2-216ENST00000494613 LMNAP02545 664 aaKnown RBP16.57■□□□□ 0.24
LIMS2-216ENST00000494613 YWHAQP27348 245 aa16.57■□□□□ 0.24
LIMS2-216ENST00000494613 ASPAP45381 313 aa16.57■□□□□ 0.24
LIMS2-216ENST00000494613 PDGFRLQ15198 375 aa16.57■□□□□ 0.24
LIMS2-216ENST00000494613 DGKKQ5KSL6 1271 aa16.57■□□□□ 0.24
LIMS2-216ENST00000494613 ZC3H14Q6PJT7 736 aaKnown RBP16.57■□□□□ 0.24
LIMS2-216ENST00000494613 ADSSL1Q8N142 457 aa16.57■□□□□ 0.24
LIMS2-216ENST00000494613 SCAMP5Q8TAC9 235 aa16.57■□□□□ 0.24
LIMS2-216ENST00000494613 SH3RF2Q8TEC5 729 aa16.57■□□□□ 0.24
LIMS2-216ENST00000494613 NELL1Q92832 810 aa16.57■□□□□ 0.24
LIMS2-216ENST00000494613 SEMA4DQ92854 862 aa16.57■□□□□ 0.24
LIMS2-216ENST00000494613 CYP3A43Q9HB55 503 aa16.57■□□□□ 0.24
LIMS2-216ENST00000494613 TMEM8AQ9HCN3 771 aa16.57■□□□□ 0.24
LIMS2-216ENST00000494613 DUS2Q9NX74 493 aaKnown RBP16.57■□□□□ 0.24
LIMS2-216ENST00000494613 IL37Q9NZH6 218 aa16.57■□□□□ 0.24
LIMS2-216ENST00000494613 VPS13AQ96RL7 3174 aa16.57■□□□□ 0.24
LIMS2-216ENST00000494613 MIA3Q5JRA6 1907 aa16.57■□□□□ 0.24
LIMS2-216ENST00000494613 ATP8B3O60423 1300 aa16.56■□□□□ 0.24
LIMS2-216ENST00000494613 GADD45BO75293 160 aaPredicted RBP16.56■□□□□ 0.24
LIMS2-216ENST00000494613 AP1G2O75843 785 aa16.56■□□□□ 0.24
LIMS2-216ENST00000494613 BEST1O76090 585 aa16.56■□□□□ 0.24
LIMS2-216ENST00000494613 RTN3O95197 1032 aaPredicted RBP16.56■□□□□ 0.24
LIMS2-216ENST00000494613 PFKLP17858 780 aa16.56■□□□□ 0.24
LIMS2-216ENST00000494613 CXCL12P48061 93 aa16.56■□□□□ 0.24
LIMS2-216ENST00000494613 PDE6CP51160 858 aa16.56■□□□□ 0.24
LIMS2-216ENST00000494613 GALK1P51570 392 aa16.56■□□□□ 0.24
LIMS2-216ENST00000494613 PMS1P54277 932 aaKnown RBP16.56■□□□□ 0.24
LIMS2-216ENST00000494613 FKBP3Q00688 224 aaKnown RBP16.56■□□□□ 0.24
LIMS2-216ENST00000494613 IFRD2Q12894 506 aaPredicted RBP16.56■□□□□ 0.24
LIMS2-216ENST00000494613 LRRC32Q14392 662 aa16.56■□□□□ 0.24
LIMS2-216ENST00000494613 MTF1Q14872 753 aa16.56■□□□□ 0.24
LIMS2-216ENST00000494613 ZNF77Q15935 545 aa16.56■□□□□ 0.24
LIMS2-216ENST00000494613 KRT39Q6A163 491 aa16.56■□□□□ 0.24
LIMS2-216ENST00000494613 FAM35AQ86V20 835 aa16.56■□□□□ 0.24
LIMS2-216ENST00000494613 SPEM1Q8N4L4 309 aa16.56■□□□□ 0.24
LIMS2-216ENST00000494613 ZBTB44Q8NCP5 570 aa16.56■□□□□ 0.24
LIMS2-216ENST00000494613 OSCP1Q8WVF1 389 aa16.56■□□□□ 0.24
LIMS2-216ENST00000494613 ATRIPQ8WXE1 791 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms