RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 SMARCAL1Q9NZC9 954 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 DMGDHQ9UI17 866 aaKnown RBP7.16□□□□□ -1.26
MSH5-217ENST00000494458 DSEQ9UL01 958 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 CDH9Q9ULB4 789 aa7.16□□□□□ -1.26
MSH5-217ENST00000494458 TTC3P53804 2025 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 ARHGEF37A1IGU5 675 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 ZNF487B1APH4 448 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 HHLA1C9JL84 531 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 E5RJQ4 531 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 TULP2O00295 520 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 MAP2K7O14733 419 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 TBC1D4O60343 1298 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 LRCH4O75427 683 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 POMCP01189 267 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 FGGP02679 453 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 GLI1P08151 1106 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 HSPA8P11142 646 aaKnown RBP7.15□□□□□ -1.26
MSH5-217ENST00000494458 MCM3P25205 808 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 TKTP29401 623 aaKnown RBP7.15□□□□□ -1.26
MSH5-217ENST00000494458 SSTR3P32745 418 aaPredicted RBP7.15□□□□□ -1.26
MSH5-217ENST00000494458 RFC2P35250 354 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 PTGIRP43119 386 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 PTPN9P43378 593 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 C1QTNF8P60827 252 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 PSMC1P62191 440 aaKnown RBP7.15□□□□□ -1.26
MSH5-217ENST00000494458 VSNL1P62760 191 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 TLE2Q04725 743 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 ADCY1Q08828 1119 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 C2orf54Q08AI8 447 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 GOLGA7BQ2TAP0 167 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 CYP4A22Q5TCH4 519 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 CCDC181Q5TID7 509 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 PM20D1Q6GTS8 502 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 CC2D1AQ6P1N0 951 aaPredicted RBP7.15□□□□□ -1.26
MSH5-217ENST00000494458 DRICH1Q6PGQ1 229 aaPredicted RBP7.15□□□□□ -1.26
MSH5-217ENST00000494458 GLB1LQ6UWU2 654 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 CLEC20AQ6ZU45 233 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 BEND5Q7L4P6 421 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 UBE2Q1Q7Z7E8 422 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 ZNF280BQ86YH2 543 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 RCOR2Q8IZ40 523 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 PRELID2Q8N945 189 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 ZMIZ2Q8NF64 920 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 SLC2A14Q8TDB8 520 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 HDAC7Q8WUI4 952 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 MCEEQ96PE7 176 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 NCAPGQ9BPX3 1015 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 LPIN3Q9BQK8 851 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 CNPY3Q9BT09 278 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 DDX23Q9BUQ8 820 aaKnown RBP7.15□□□□□ -1.26
MSH5-217ENST00000494458 B3GNT5Q9BYG0 378 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 PNPLA8Q9NP80 782 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 STIM2Q9P246 746 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.15□□□□□ -1.26
MSH5-217ENST00000494458 NEU2Q9Y3R4 380 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 USP3Q9Y6I4 520 aa7.15□□□□□ -1.26
MSH5-217ENST00000494458 MYBPHLA2RUH7 354 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 DCDC2CA8MYV0 355 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 KRIT1O00522 736 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 SYN3O14994 580 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 KIAA0355O15063 1070 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 HOXA2O43364 376 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 SPOPO43791 374 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 ATP2C2O75185 946 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 BEST1O76090 585 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 B3GAT3O94766 335 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 GJB6O95452 261 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 TRUB2O95900 331 aaKnown RBP7.14□□□□□ -1.27
MSH5-217ENST00000494458 ITGB1P05556 798 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 PDGFRBP09619 1106 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 RARAP10276 462 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 ODC1P11926 461 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 TCF4P15884 667 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 NPR3P17342 541 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 IL1R2P27930 398 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 PCSK1P29120 753 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 CHRNA3P32297 505 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 BRCA2P51587 3418 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 EIF4EBP2Q13542 120 aaPredicted RBP7.14□□□□□ -1.27
MSH5-217ENST00000494458 DHX34Q14147 1143 aaKnown RBP7.14□□□□□ -1.27
MSH5-217ENST00000494458 CCDC14Q49A88 953 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 INTS6LQ5JSJ4 861 aaKnown RBP7.14□□□□□ -1.27
MSH5-217ENST00000494458 AADACL2Q6P093 401 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 DCUN1D2Q6PH85 259 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 FAM183BPQ6ZVS7 135 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 BHLHA9Q7RTU4 235 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 ANKS1BQ7Z6G8 1248 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 PIGZQ86VD9 579 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 LRRTM3Q86VH5 581 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 RNF168Q8IYW5 571 aaPredicted RBP7.14□□□□□ -1.27
MSH5-217ENST00000494458 IPO4Q8TEX9 1081 aaKnown RBP7.14□□□□□ -1.27
MSH5-217ENST00000494458 AENQ8WTP8 325 aaKnown RBP7.14□□□□□ -1.27
MSH5-217ENST00000494458 TEKT4Q8WW24 435 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 MAIP1Q8WWC4 291 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 PIWIL1Q96J94 861 aaKnown RBP7.14□□□□□ -1.27
MSH5-217ENST00000494458 RUNDC3BQ96NL0 473 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 SLC2A13Q96QE2 648 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 TBCBQ99426 244 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 SMOQ99835 787 aa7.14□□□□□ -1.27
MSH5-217ENST00000494458 SYT15Q9BQS2 421 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms