RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 SPEM1Q8N4L4 309 aa10.4□□□□□ -0.74
UFD1-210ENST00000494054 B3GALNT2Q8NCR0 500 aa10.4□□□□□ -0.74
UFD1-210ENST00000494054 TTC16Q8NEE8 873 aa10.4□□□□□ -0.74
UFD1-210ENST00000494054 C8orf48Q96LL4 319 aa10.4□□□□□ -0.74
UFD1-210ENST00000494054 IER2Q9BTL4 223 aa10.4□□□□□ -0.74
UFD1-210ENST00000494054 TTLL2Q9BWV7 592 aa10.4□□□□□ -0.74
UFD1-210ENST00000494054 KIF9Q9HAQ2 790 aa10.4□□□□□ -0.74
UFD1-210ENST00000494054 FBRSL1Q9HCM7 1045 aaKnown RBP10.4□□□□□ -0.74
UFD1-210ENST00000494054 TRAF3IP3Q9Y228 551 aa10.4□□□□□ -0.74
UFD1-210ENST00000494054 ATP6V1DQ9Y5K8 247 aa10.4□□□□□ -0.74
UFD1-210ENST00000494054 ZNF292O60281 2723 aa10.4□□□□□ -0.75
UFD1-210ENST00000494054 PTPRDP23468 1912 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 GREB1Q4ZG55 1949 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 TRAV19A0A0A6YYK7 116 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 ZNF840PA6NDX5 716 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 CALUO43852 315 aaPredicted RBP10.39□□□□□ -0.75
UFD1-210ENST00000494054 AKAP3O75969 853 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 CKMP06732 381 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 HDCP19113 662 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 ANXA13P27216 316 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 CCR3P51677 355 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 USP4Q13107 963 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 ORC1Q13415 861 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 LRRC32Q14392 662 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 MTF1Q14872 753 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 ZACNQ401N2 412 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 SPOPLQ6IQ16 392 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 FSTL4Q6MZW2 842 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 CC2D1AQ6P1N0 951 aaPredicted RBP10.39□□□□□ -0.75
UFD1-210ENST00000494054 PKN3Q6P5Z2 889 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 SV2AQ7L0J3 742 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 TMC2Q8TDI7 906 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 SH3RF2Q8TEC5 729 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 RUBCNQ92622 972 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 CEP295NLQ96MC4 621 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 KCNK16Q96T55 309 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 ELOVL4Q9GZR5 314 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 RNF38Q9H0F5 515 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 EPC1Q9H2F5 836 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 LINC00597Q9H2U6 94 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.39□□□□□ -0.752e-7■■■■■ 35
UFD1-210ENST00000494054 TRPM5Q9NZQ8 1165 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 WNT6Q9Y6F9 365 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 ANAPC1Q9H1A4 1944 aa10.39□□□□□ -0.75
UFD1-210ENST00000494054 ZNF638Q14966 1978 aaKnown RBP10.38□□□□□ -0.75
UFD1-210ENST00000494054 CHURC1-FNTBB4DL54 471 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 K7ESF4 209 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 TRDMT1O14717 391 aaKnown RBP10.38□□□□□ -0.75
UFD1-210ENST00000494054 IKBKBO14920 756 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 TRIM66O15016 1216 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 CLSTN1O94985 981 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 ASS1P00966 412 aaKnown RBP10.38□□□□□ -0.75
UFD1-210ENST00000494054 HLA-DRAP01903 254 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 TRIM49P0CI25 452 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 TRIM49CP0CI26 452 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 NR2F2P24468 414 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 GJA4P35212 333 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 FNTBP49356 437 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 GALK1P51570 392 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 NOP14P78316 857 aaKnown RBP10.38□□□□□ -0.75
UFD1-210ENST00000494054 PPP3CAQ08209 521 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 TAF10Q12962 218 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 KCNB1Q14721 858 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 PDGFRLQ15198 375 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 NFIL3Q16649 462 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 SGSM1Q2NKQ1 1148 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 EML3Q32P44 896 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 TMEM196Q5HYL7 178 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 ACOT1Q86TX2 421 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 SMYD4Q8IYR2 804 aaPredicted RBP10.38□□□□□ -0.75
UFD1-210ENST00000494054 KIAA2013Q8IYS2 634 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 FUKQ8N0W3 1084 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 SYNPOQ8N3V7 929 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 GUF1Q8N442 669 aaKnown RBP10.38□□□□□ -0.75
UFD1-210ENST00000494054 OSCP1Q8WVF1 389 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 CCDC47Q96A33 483 aaKnown RBP10.38□□□□□ -0.75
UFD1-210ENST00000494054 FAM126AQ9BYI3 521 aaPredicted RBP10.38□□□□□ -0.75
UFD1-210ENST00000494054 ECT2Q9H8V3 914 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 DUS2Q9NX74 493 aaKnown RBP10.38□□□□□ -0.75
UFD1-210ENST00000494054 HMGXB4Q9UGU5 601 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 ARHGAP26Q9UNA1 814 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 FRMD4BQ9Y2L6 1034 aa10.38□□□□□ -0.75
UFD1-210ENST00000494054 VPS13AQ96RL7 3174 aa10.37□□□□□ -0.75
UFD1-210ENST00000494054 LEFTY2O00292 366 aa10.37□□□□□ -0.75
UFD1-210ENST00000494054 MAPK13O15264 365 aa10.37□□□□□ -0.75
UFD1-210ENST00000494054 KIF20AO95235 890 aa10.37□□□□□ -0.75
UFD1-210ENST00000494054 PAPSS2O95340 614 aaPredicted RBP10.37□□□□□ -0.75
UFD1-210ENST00000494054 ABL1P00519 1130 aa10.37□□□□□ -0.75
UFD1-210ENST00000494054 EGFP01133 1207 aa10.37□□□□□ -0.75
UFD1-210ENST00000494054 CCDC130P13994 396 aa10.37□□□□□ -0.75
UFD1-210ENST00000494054 TCF3P15923 654 aa10.37□□□□□ -0.75
UFD1-210ENST00000494054 ASPAP45381 313 aa10.37□□□□□ -0.75
UFD1-210ENST00000494054 GCLMP48507 274 aa10.37□□□□□ -0.75
UFD1-210ENST00000494054 IFNAR2P48551 515 aa10.37□□□□□ -0.75
UFD1-210ENST00000494054 VAMP7P51809 220 aa10.37□□□□□ -0.75
UFD1-210ENST00000494054 IFRD2Q12894 506 aaPredicted RBP10.37□□□□□ -0.75
UFD1-210ENST00000494054 ADAM9Q13443 819 aa10.37□□□□□ -0.75
UFD1-210ENST00000494054 PNOCQ13519 176 aa10.37□□□□□ -0.75
UFD1-210ENST00000494054 ZCWPW2Q504Y3 356 aa10.37□□□□□ -0.75
UFD1-210ENST00000494054 FAM35AQ86V20 835 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms