RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 EIF2AQ9BY44 585 aaKnown RBP14.46□□□□□ -0.09
VCP-207ENST00000493886 TSPYL2Q9H2G4 693 aaPredicted RBP14.46□□□□□ -0.09
VCP-207ENST00000493886 PLEKHA5Q9HAU0 1116 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 hCG_1818297A0A087WSY0 165 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 SMIM35A0A1B0GVV1 85 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 MBLAC1A4D2B0 266 aaPredicted RBP14.46□□□□□ -0.09
VCP-207ENST00000493886 SRRM3A6NNA2 597 aaPredicted RBP14.46□□□□□ -0.09
VCP-207ENST00000493886 LIASO43766 372 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 RASSF9O75901 435 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 CYP2C9P11712 490 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 CAV1Q03135 178 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 MYO1EQ12965 1108 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 TFDP3Q5H9I0 405 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 CST9Q5W186 159 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 OLFML2BQ68BL8 750 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 CYB5D1Q6P9G0 228 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 POLNQ7Z5Q5 900 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 TTC39CQ8N584 583 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 ARFGAP1Q8N6T3 406 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 EMC1Q8N766 993 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 ZNF317Q96PQ6 595 aaPredicted RBP14.46□□□□□ -0.09
VCP-207ENST00000493886 TRAIPQ9BWF2 469 aa14.46□□□□□ -0.09
VCP-207ENST00000493886 CDC42EP4Q9H3Q1 356 aaKnown RBP14.46□□□□□ -0.09
VCP-207ENST00000493886 FAM124BQ9H5Z6 455 aaPredicted RBP14.46□□□□□ -0.09
VCP-207ENST00000493886 LRCH4O75427 683 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 ZNF865P0CJ78 1059 aaPredicted RBP14.45□□□□□ -0.1
VCP-207ENST00000493886 CDKN2BP42772 138 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 GABRB2P47870 512 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 HUNKP57058 714 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 SLC25A11Q02978 314 aaKnown RBP14.45□□□□□ -0.1
VCP-207ENST00000493886 IRF5Q13568 498 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 MFSD10Q14728 455 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 E2F5Q15329 346 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 NOTUMQ6P988 496 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 TRMT10CQ7L0Y3 403 aaKnown RBP14.45□□□□□ -0.1
VCP-207ENST00000493886 GSTA5Q7RTV2 222 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 PRUNE1Q86TP1 453 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 FUKQ8N0W3 1084 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 UBA3Q8TBC4 463 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 SNX27Q96L92 541 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 ZMAT2Q96NC0 199 aaKnown RBP14.45□□□□□ -0.1
VCP-207ENST00000493886 NT5C1AQ9BXI3 368 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 TBK1Q9UHD2 729 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 ANAPC5Q9UJX4 755 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 DNPEPQ9ULA0 475 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 DERAQ9Y315 318 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 IGF2BP3O00425 579 aaKnown RBP eCLIP14.45□□□□□ -0.1
VCP-207ENST00000493886 DARSP14868 501 aaKnown RBP14.45□□□□□ -0.1
VCP-207ENST00000493886 CCNHP51946 323 aaPredicted RBP14.45□□□□□ -0.1
VCP-207ENST00000493886 LMNB2Q03252 620 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 AUHQ13825 339 aaKnown RBP14.45□□□□□ -0.1
VCP-207ENST00000493886 DRICH1Q6PGQ1 229 aaPredicted RBP14.45□□□□□ -0.1
VCP-207ENST00000493886 CCT6BQ92526 530 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 MCRS1Q96EZ8 462 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 PGM2Q96G03 612 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 ZWILCHQ9H900 591 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 HES2Q9Y543 173 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 CYP3A5P20815 502 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 KLRC2P26717 231 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 YARSP54577 528 aaKnown RBP14.45□□□□□ -0.1
VCP-207ENST00000493886 HIC1Q14526 733 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 HADHQ16836 314 aaKnown RBP14.45□□□□□ -0.1
VCP-207ENST00000493886 BBOF1Q8ND07 529 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 GDAP1Q8TB36 358 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 TMEM109Q9BVC6 243 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 ACTR5Q9H9F9 607 aaPredicted RBP14.45□□□□□ -0.1
VCP-207ENST00000493886 KIAA1257Q9ULG3 409 aa14.45□□□□□ -0.1
VCP-207ENST00000493886 SCN1AP35498 2009 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 PPEF2O14830 753 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 KRT7P08729 469 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 IL1R2P27930 398 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 PCBP1Q15365 356 aaKnown RBP eCLIP14.44□□□□□ -0.16e-7■■■■□ 25.9
VCP-207ENST00000493886 SMTNL2Q2TAL5 461 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 LCLAT1Q6UWP7 414 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 GET4Q7L5D6 327 aaPredicted RBP14.44□□□□□ -0.1
VCP-207ENST00000493886 CROCCP2Q86T23 111 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 KCNK9Q9NPC2 374 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 GGA2Q9UJY4 613 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 TSPAN16Q9UKR8 245 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 ZNF148Q9UQR1 794 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 RALGAPA2Q2PPJ7 1873 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 C3orf70A6NLC5 250 aaPredicted RBP14.44□□□□□ -0.1
VCP-207ENST00000493886 TAF1CQ15572 869 aaPredicted RBP14.44□□□□□ -0.1
VCP-207ENST00000493886 CCL14Q16627 93 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 TBC1D25Q3MII6 688 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 IZUMO3Q5VZ72 239 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 HIBCHQ6NVY1 386 aaPredicted RBP14.44□□□□□ -0.1
VCP-207ENST00000493886 DNAJB3Q8WWF6 145 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 ABCF3Q9NUQ8 709 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 SAMD15Q9P1V8 674 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 TUBGCP4Q9UGJ1 667 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 SNX9Q9Y5X1 595 aa14.44□□□□□ -0.1
VCP-207ENST00000493886 NAT1P18440 290 aa14.43□□□□□ -0.1
VCP-207ENST00000493886 RDXP35241 583 aaKnown RBP14.43□□□□□ -0.1
VCP-207ENST00000493886 PSEN2P49810 448 aa14.43□□□□□ -0.1
VCP-207ENST00000493886 ADAM17P78536 824 aa14.43□□□□□ -0.1
VCP-207ENST00000493886 ZBTB6Q15916 424 aa14.43□□□□□ -0.1
VCP-207ENST00000493886 KYNUQ16719 465 aa14.43□□□□□ -0.1
VCP-207ENST00000493886 KCNT1Q5JUK3 1230 aa14.43□□□□□ -0.1
VCP-207ENST00000493886 C6orf118Q5T5N4 469 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms