RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 TWF1Q12792 350 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 RAD54BQ9Y620 910 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 LOC102724159A0A0B4J2E5 919 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 C2orf81A6NN90 581 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 LSM8O95777 96 aaKnown RBP20.85■□□□□ 0.93
RNF40-203ENST00000493683 VDRP11473 427 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 UBE3AQ05086 875 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 PWP2Q15269 919 aaKnown RBP20.85■□□□□ 0.93
RNF40-203ENST00000493683 ZRANB3Q5FWF4 1079 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 IYDQ6PHW0 289 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 ZNF333Q96JL9 665 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 SLITRK1Q96PX8 696 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 CNOT7Q9UIV1 285 aaKnown RBP20.85■□□□□ 0.93
RNF40-203ENST00000493683 STX7O15400 261 aaKnown RBP20.84■□□□□ 0.93
RNF40-203ENST00000493683 ATP5BP06576 529 aaKnown RBP20.84■□□□□ 0.93
RNF40-203ENST00000493683 BRD2P25440 801 aaKnown RBP20.84■□□□□ 0.93
RNF40-203ENST00000493683 PLA2G4FQ68DD2 849 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 KCNH7Q9NS40 1196 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 GRAP2O75791 330 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 DGKIO75912 1065 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 ERVK-24P63145 666 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 CNTN1Q12860 1018 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 ITGA9Q13797 1035 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 SMTNL2Q2TAL5 461 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 CEP78Q5JTW2 689 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 FBXO33Q7Z6M2 555 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 C1orf131Q8NDD1 294 aaKnown RBP20.84■□□□□ 0.93
RNF40-203ENST00000493683 MDM1Q8TC05 714 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 WWOXQ9NZC7 414 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 SH3BP1Q9Y3L3 701 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 SETBP1Q9Y6X0 1596 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 CLTCL1P53675 1640 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 RBP1P09455 135 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 CHSY1Q86X52 802 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 ZNF786Q8N393 782 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 EXD1Q8NHP7 514 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 TMC2Q8TDI7 906 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 PNKPQ96T60 521 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 CRLS1Q9UJA2 301 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 RPS6KL1Q9Y6S9 549 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 MLNP12872 115 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 NCAM1P13591 858 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 TRAF7Q6Q0C0 670 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.84■□□□□ 0.935e-6■■■■■ 45.5
RNF40-203ENST00000493683 MARCH10Q8NA82 808 aaPredicted RBP20.84■□□□□ 0.93
RNF40-203ENST00000493683 FBXO36Q8NEA4 188 aa20.84■□□□□ 0.93
RNF40-203ENST00000493683 CINPQ9BW66 212 aaPredicted RBP20.84■□□□□ 0.93
RNF40-203ENST00000493683 LAMC2Q13753 1193 aa20.83■□□□□ 0.93
RNF40-203ENST00000493683 EFCAB12Q6NXP0 572 aa20.83■□□□□ 0.93
RNF40-203ENST00000493683 RBM43Q6ZSC3 357 aaKnown RBP20.83■□□□□ 0.93
RNF40-203ENST00000493683 SLC26A11Q86WA9 606 aa20.83■□□□□ 0.93
RNF40-203ENST00000493683 PARK7Q99497 189 aaKnown RBP20.83■□□□□ 0.93
RNF40-203ENST00000493683 L1RE1Q9UN81 338 aa20.83■□□□□ 0.93
RNF40-203ENST00000493683 VPS26AO75436 327 aa20.83■□□□□ 0.93
RNF40-203ENST00000493683 MAML3Q96JK9 1138 aa20.83■□□□□ 0.93
RNF40-203ENST00000493683 GANQ9H2C0 597 aa20.83■□□□□ 0.93
RNF40-203ENST00000493683 DIABLOQ9NR28 239 aa20.83■□□□□ 0.93
RNF40-203ENST00000493683 HPS5Q9UPZ3 1129 aa20.83■□□□□ 0.93
RNF40-203ENST00000493683 F8W810 466 aa20.83■□□□□ 0.92
RNF40-203ENST00000493683 PURAQ00577 322 aaKnown RBP20.83■□□□□ 0.92
RNF40-203ENST00000493683 CCNG2Q16589 344 aa20.83■□□□□ 0.92
RNF40-203ENST00000493683 SEL1L3Q68CR1 1132 aa20.83■□□□□ 0.92
RNF40-203ENST00000493683 MRPS26Q9BYN8 205 aaKnown RBP20.83■□□□□ 0.92
RNF40-203ENST00000493683 ZNF70Q9UC06 446 aaPredicted RBP20.83■□□□□ 0.92
RNF40-203ENST00000493683 RNF103O00237 685 aa20.83■□□□□ 0.92
RNF40-203ENST00000493683 IFNA14P01570 189 aa20.83■□□□□ 0.92
RNF40-203ENST00000493683 SOAT1P35610 550 aa20.83■□□□□ 0.92
RNF40-203ENST00000493683 CPA2P48052 419 aa20.83■□□□□ 0.92
RNF40-203ENST00000493683 PTPAQ15257 358 aa20.83■□□□□ 0.92
RNF40-203ENST00000493683 TRMT5Q32P41 509 aaKnown RBP20.83■□□□□ 0.92
RNF40-203ENST00000493683 UBA3Q8TBC4 463 aa20.83■□□□□ 0.92
RNF40-203ENST00000493683 SIKE1Q9BRV8 207 aa20.83■□□□□ 0.92
RNF40-203ENST00000493683 THUMPD3Q9BV44 507 aaKnown RBP20.83■□□□□ 0.92
RNF40-203ENST00000493683 BBS2Q9BXC9 721 aa20.83■□□□□ 0.92
RNF40-203ENST00000493683 PRIM2P49643 509 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 RAB14P61106 215 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 EIF2B5Q13144 721 aaKnown RBP20.82■□□□□ 0.92
RNF40-203ENST00000493683 TRIP4Q15650 581 aaPredicted RBP20.82■□□□□ 0.92
RNF40-203ENST00000493683 APOL5Q9BWW9 433 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 IL1RL2Q9HB29 575 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 A0A087X0T9 212 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 CES2O00748 559 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 OGTO15294 1046 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 EIF2S1P05198 315 aaKnown RBP20.82■□□□□ 0.92
RNF40-203ENST00000493683 FAM228BP0C875 321 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 PTPN4P29074 926 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 EPHB2P29323 1055 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 SNAPC2Q13487 334 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 LAYNQ6UX15 382 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 LRRC8DQ7L1W4 858 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 RAET1EQ8TD07 263 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 FAM118BQ9BPY3 351 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 GPR75-ASB3A0A0A6YYF3 556 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 RRM2P31350 389 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 KLHL4Q9C0H6 718 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 ODC1P11926 461 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 C11orf63Q6NUN7 778 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 EPS8L3Q8TE67 593 aaKnown RBP20.82■□□□□ 0.92
RNF40-203ENST00000493683 BTN2A2Q8WVV5 523 aa20.82■□□□□ 0.92
RNF40-203ENST00000493683 PTPRUQ92729 1446 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms