RNA–Protein interactions for RNA: ENST00000493672.1

SNRNP25-207, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-207ENST00000493672 SMARCD1Q96GM5 515 aa12.89□□□□□ -0.35
SNRNP25-207ENST00000493672 LRRC3BQ96PB8 259 aa12.89□□□□□ -0.35
SNRNP25-207ENST00000493672 SLITRK1Q96PX8 696 aa12.89□□□□□ -0.35
SNRNP25-207ENST00000493672 MED10Q9BTT4 135 aa12.89□□□□□ -0.35
SNRNP25-207ENST00000493672 ZNF518BQ9C0D4 1074 aa12.89□□□□□ -0.35
SNRNP25-207ENST00000493672 NIF3L1Q9GZT8 377 aa12.89□□□□□ -0.35
SNRNP25-207ENST00000493672 SMG9Q9H0W8 520 aaKnown RBP12.89□□□□□ -0.35
SNRNP25-207ENST00000493672 SDCBP2Q9H190 292 aa12.89□□□□□ -0.35
SNRNP25-207ENST00000493672 FAM124BQ9H5Z6 455 aaPredicted RBP12.89□□□□□ -0.35
SNRNP25-207ENST00000493672 SPATA6Q9NWH7 488 aaPredicted RBP12.89□□□□□ -0.35
SNRNP25-207ENST00000493672 COMMD8Q9NX08 183 aa12.89□□□□□ -0.35
SNRNP25-207ENST00000493672 CHMP5Q9NZZ3 219 aa12.89□□□□□ -0.35
SNRNP25-207ENST00000493672 CACNA1HO95180 2353 aa12.89□□□□□ -0.35
SNRNP25-207ENST00000493672 SHISA7A6NL88 538 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 CLDN5O00501 218 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 LRRN2O75325 713 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 CKMP06732 381 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 TCF3P15923 654 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 HDCP19113 662 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 CCNE1P24864 410 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 MXI1P50539 228 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 NDST1P52848 882 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 AMPD2Q01433 879 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 INCA1Q0VD86 236 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 LRRC32Q14392 662 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 PDGFRLQ15198 375 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 ITPRIPL2Q3MIP1 535 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 ZNF528Q3MIS6 628 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 SPOPLQ6IQ16 392 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 FOXR2Q6PJQ5 311 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 ZC3H14Q6PJT7 736 aaKnown RBP12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 ACOT1Q86TX2 421 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 NUP93Q8N1F7 819 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 ZNF687Q8N1G0 1237 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 KIAA1958Q8N8K9 716 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 FBXL13Q8NEE6 735 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 PDZD8Q8NEN9 1154 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 OVCA2Q8WZ82 227 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 ERCC4Q92889 916 aaPredicted RBP12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 PHOX2BQ99453 314 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 FAM83CQ9BQN1 747 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 SEMA4AQ9H3S1 761 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 MMRN2Q9H8L6 949 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 METTL14Q9HCE5 456 aaKnown RBP12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 TRPC7Q9HCX4 862 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 DMAP1Q9NPF5 467 aaPredicted RBP12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 GKN1Q9NS71 199 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 GCNT4Q9P109 453 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 FBXO4Q9UKT5 387 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 NDRG2Q9UN36 371 aaKnown RBP12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 KIF26AQ9ULI4 1882 aaPredicted RBP12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 ANAPC1Q9H1A4 1944 aa12.88□□□□□ -0.35
SNRNP25-207ENST00000493672 COL4A3Q01955 1670 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 F5P12259 2224 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 ZNF840PA6NDX5 716 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 SPECC1L-ADORA2AF8WAN1 911 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 YWHAQP27348 245 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 CTHP32929 405 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 UBE2HP62256 183 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 USP4Q13107 963 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 FZD5Q13467 585 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 WDR44Q5JSH3 913 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 DGKKQ5KSL6 1271 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 TCERG1LQ5VWI1 586 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 MAMSTRQ6ZN01 415 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 FUKQ8N0W3 1084 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 ARL14EPQ8N8R7 260 aaPredicted RBP12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 EXOC4Q96A65 974 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 ZFYVE19Q96K21 471 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 CEP63Q96MT8 703 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 NT5C1AQ9BXI3 368 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 CHRDQ9H2X0 955 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 LMAN1LQ9HAT1 526 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 APOBEC3GQ9HC16 384 aaKnown RBP12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 RAB20Q9NX57 234 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 GTSE1Q9NYZ3 720 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 ARMCX3Q9UH62 379 aaPredicted RBP12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 MAN1B1Q9UKM7 699 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 ARHGAP26Q9UNA1 814 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 CCL26Q9Y258 94 aa12.87□□□□□ -0.35
SNRNP25-207ENST00000493672 PATJQ8NI35 1801 aa12.86□□□□□ -0.35
SNRNP25-207ENST00000493672 BICDL2A1A5D9 508 aa12.86□□□□□ -0.35
SNRNP25-207ENST00000493672 C2orf78A6NCI8 922 aa12.86□□□□□ -0.35
SNRNP25-207ENST00000493672 GFRA3O60609 400 aa12.86□□□□□ -0.35
SNRNP25-207ENST00000493672 GADD45BO75293 160 aaPredicted RBP12.86□□□□□ -0.35
SNRNP25-207ENST00000493672 CILPO75339 1184 aa12.86□□□□□ -0.35
SNRNP25-207ENST00000493672 AP1G2O75843 785 aa12.86□□□□□ -0.35
SNRNP25-207ENST00000493672 SP9P0CG40 484 aa12.86□□□□□ -0.35
SNRNP25-207ENST00000493672 ANP32AP39687 249 aaKnown RBP12.86□□□□□ -0.35
SNRNP25-207ENST00000493672 CACNA2D1P54289 1103 aa12.86□□□□□ -0.35
SNRNP25-207ENST00000493672 USP46P62068 366 aa12.86□□□□□ -0.35
SNRNP25-207ENST00000493672 TAF10Q12962 218 aa12.86□□□□□ -0.35
SNRNP25-207ENST00000493672 RUNX3Q13761 415 aa12.86□□□□□ -0.35
SNRNP25-207ENST00000493672 PPP2R5DQ14738 602 aa12.86□□□□□ -0.35
SNRNP25-207ENST00000493672 MTF1Q14872 753 aa12.86□□□□□ -0.35
SNRNP25-207ENST00000493672 ZNF77Q15935 545 aa12.86□□□□□ -0.35
SNRNP25-207ENST00000493672 DCAF17Q5H9S7 520 aaPredicted RBP12.86□□□□□ -0.35
SNRNP25-207ENST00000493672 PAQR9Q6ZVX9 377 aa12.86□□□□□ -0.35
SNRNP25-207ENST00000493672 FRMD5Q7Z6J6 570 aa12.86□□□□□ -0.35
SNRNP25-207ENST00000493672 FILIP1Q7Z7B0 1213 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms